Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04323 and RBAM_026800
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:47
# Commandline: needle
# -asequence dna-align/BSNT_04323___acsA.1.9828.seq
# -bsequence dna-align/RBAM_026800___acsA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04323___acsA-RBAM_026800___acsA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04323___acsA-RBAM_026800___acsA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04323___acsA
# 2: RBAM_026800___acsA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1741
# Identity: 1407/1741 (80.8%)
# Similarity: 1407/1741 (80.8%)
# Gaps: 44/1741 ( 2.5%)
# Score: 5701.0
#
#
#=======================================
BSNT_04323___ 1 ATGAATTTGAAAGCGTTACCAGCAATAGAGGGGGATCATAACTTAAAAAA 50
|||||||||||||||||.||.||...|.|||||.||.||.|..|...|||
RBAM_026800__ 1 ATGAATTTGAAAGCGTTGCCGGCGGAAAAGGGGAATTATCATCTGCGAAA 50
BSNT_04323___ 51 CTATGAAGAAACGTACCG--GCATTTTGATTG------GGCCGAGGCAGA 92
.|||||.||||||||||| || ||.||||| ||.|||.||.|
RBAM_026800__ 51 TTATGAGGAAACGTACCGCAGC--TTCGATTGGAAAGAGGTCGAAGCGG- 97
BSNT_04323___ 93 GAAACATTTCTCTTGGCATGAGACAGGGAAACTGAATGCGGCGTATGAAG 142
||||| ||.||||||.||||.|||||.||||||||||||||.||||
RBAM_026800__ 98 ----CATTT-TCCTGGCATCAGACGGGGAAGCTGAATGCGGCGTACGAAG 142
BSNT_04323___ 143 CGATTGACCGCCATGCCGAATCGTTTCGAAAAAACAAAGTAGCGCTTTAT 192
||||||||||.|||||||||||.|||||||||||||||||||||||.|||
RBAM_026800__ 143 CGATTGACCGTCATGCCGAATCATTTCGAAAAAACAAAGTAGCGCTGTAT 192
BSNT_04323___ 193 TATAAAGACGCAAAAAGGGATGAAAAATACACATTTAAAGAAATGAAGGA 242
||.||.||||||||..||||||||||||||||||||||||||||||.|||
RBAM_026800__ 193 TACAAGGACGCAAACCGGGATGAAAAATACACATTTAAAGAAATGATGGA 242
BSNT_04323___ 243 AGAATCAAACAGAGCCGGGAATGTGCTGAGACGGTATGGAAATGTGGAAA 292
.|||||.|||.|.||.||.|||||.|||||||||||||||||.|||||||
RBAM_026800__ 243 GGAATCGAACCGGGCGGGAAATGTACTGAGACGGTATGGAAACGTGGAAA 292
BSNT_04323___ 293 AAGGGGACCGCGTTTTTATTTTTATGCCGAGATCACCCGAGCTTTATTTT 342
||||||||||||||||||||||.||||||.|.||.||.||||||||.|||
RBAM_026800__ 293 AAGGGGACCGCGTTTTTATTTTCATGCCGCGTTCGCCGGAGCTTTACTTT 342
BSNT_04323___ 343 ATTATGCTTGGCGCAATCAAAATTGGCGCCATCGCCGGGCCGCTGTTCGA 392
||.|||||.||||||||.|||||.||.||.||||||||.||..|.||.||
RBAM_026800__ 343 ATCATGCTCGGCGCAATTAAAATCGGTGCGATCGCCGGTCCTTTATTTGA 392
BSNT_04323___ 393 AGCATTTATGGAGGGAGCGGTGAAAGATCG--GCTTGAAAACAGTGAGGC 440
|||.||||||||.||.||.||.|||||.|| .|||| |||||..||||
RBAM_026800__ 393 AGCGTTTATGGAAGGCGCCGTCAAAGACCGCCTCTTG--AACAGCCAGGC 440
BSNT_04323___ 441 AAAGGTTGTTGTCACAACACCTGAGCTGCTGGAGAGAATACCGGTAGACA 490
|||||||||.||.|||||||||||.|||...||..|.||.||||..||||
RBAM_026800__ 441 AAAGGTTGTCGTGACAACACCTGAACTGGCCGAACGGATTCCGGCGGACA 490
BSNT_04323___ 491 AACTGCCTCACTTGCAGCATGTCTTCGTAGTCGGGGGAGAGGCTG---AG 537
..|||||..||.|..|||||.|.|||.|.|||| |||||.| ||
RBAM_026800__ 491 GCCTGCCCGACCTCGAGCATATTTTCATTGTCG-----GAGGCAGCCAAG 535
BSNT_04323___ 538 -AGCGGCACG--AATATCATCAATTATGATGAAGC-----AGCGAAACAG 579
|||||.| | ||.|||||..||||||||.|||| ||.||
RBAM_026800__ 536 AAGCGGGA-GATAAAATCATTCATTATGATAAAGCGGCTGAGGGA----- 579
BSNT_04323___ 580 GAAAGCACAAGACTGGATATCGAATGGATGGATAAAAAAGACGGCTTTCT 629
||||||||.|||||.|||||.|||||||||||.|.||.||||||||..||
RBAM_026800__ 580 GAAAGCACGAGACTTGATATTGAATGGATGGACAGAAGAGACGGCTACCT 629
BSNT_04323___ 630 GCTTCACTATACATCAGGTTCCACTGGTACGCCAAAGGGCGTGCTGCATG 679
|||||||||.||||||||.||.||.||.|||||.||.||.|||||.||.|
RBAM_026800__ 630 GCTTCACTACACATCAGGATCTACCGGAACGCCTAAAGGTGTGCTCCACG 679
BSNT_04323___ 680 TCCATGAAGCGATGATTCAGCAATATCAAACAGGAAAGTGGGTCCTTGAT 729
|.||||||||.||||||||||||||.||.||.||.||||||||.||||||
RBAM_026800__ 680 TTCATGAAGCCATGATTCAGCAATACCAGACCGGCAAGTGGGTGCTTGAT 729
BSNT_04323___ 730 -TTAAAGGAAGAAGACATTTATTGGTGCACGGCTGATCCAGGCTGGGTGA 778
||||| |||||.||.|||||.||||||||.||.||.||.||||||||||
RBAM_026800__ 730 CTTAAA-GAAGACGATATTTACTGGTGCACTGCGGACCCGGGCTGGGTGA 778
BSNT_04323___ 779 CAGGTACGGTATACGGCATTTTTGCACCGTGGCTGAACGGAGCGACAAAT 828
|.||.|||||.|||||.||.|||||.||||||||||||||||||.|.|||
RBAM_026800__ 779 CCGGGACGGTGTACGGGATATTTGCGCCGTGGCTGAACGGAGCGGCGAAT 828
BSNT_04323___ 829 GTCATCGTCGGCGGACGTTTCAGCCCGGAAAGCTGGTATGGTACGATTGA 878
||.|||||||||||..|.|||||.|||||||.||||||.||.|||||.||
RBAM_026800__ 829 GTAATCGTCGGCGGCAGGTTCAGTCCGGAAAACTGGTACGGCACGATCGA 878
BSNT_04323___ 879 ACAGCTTGGCGTCAATGTCTGGTACAGCGCGCCGACCGCTTTTCGGATGC 928
..||||.||.||||..||||||||||||||.|||||.|||||..|.||||
RBAM_026800__ 879 GAAGCTCGGTGTCAGCGTCTGGTACAGCGCTCCGACGGCTTTCAGAATGC 928
BSNT_04323___ 929 TGATGGGAGCGGGAGATGAAATGGCTGCGAAATATGATCTAACTTCACTC 978
|.|||||.||.||||||||||||||..|.||||.|||.||.||||||||.
RBAM_026800__ 929 TTATGGGCGCCGGAGATGAAATGGCATCCAAATTTGACCTTACTTCACTT 978
BSNT_04323___ 979 CGGCATGTGCTCAGTGTCGGTGAGCCGCTAAATCCGGAAGTCATCAGATG 1028
||.||.||.||.||||||||.||.||..|.|||||.||.||.||||..||
RBAM_026800__ 979 CGTCACGTCCTGAGTGTCGGAGAACCTTTGAATCCCGAGGTTATCAAGTG 1028
BSNT_04323___ 1029 GGGACATAAAGTTTTTAACAAACGAATTCATGATACATGGTGGATGACAG 1078
||||||||||||.||...|||.||.||.||.||.||.|||||||||||||
RBAM_026800__ 1029 GGGACATAAAGTATTCGGCAAGCGCATCCACGACACGTGGTGGATGACAG 1078
BSNT_04323___ 1079 AAACGGGCAGTCAGCTTATCTGCAACTATCCTTGCATGGATATTAAACCG 1128
||||||||.|.|||||.||||||||.||||||||||||||.||.||.|||
RBAM_026800__ 1079 AAACGGGCGGACAGCTCATCTGCAATTATCCTTGCATGGAGATCAAGCCG 1128
BSNT_04323___ 1129 GGTTCAATGGGTAAGCCGATTCCAGGAGTGGAGGCAGCGATCGTTGACAA 1178
|||||||||||.||.||||||||.||||||||.||.||||||||||||||
RBAM_026800__ 1129 GGTTCAATGGGGAAACCGATTCCGGGAGTGGAAGCGGCGATCGTTGACAA 1178
BSNT_04323___ 1179 TCAAGGCAACGAGCTTCCGCCGTACCGAATGGGCAATCTCGCCATCAAAA 1228
|||.||.||.|||||||||||||||||||||||.|||||||||||.||||
RBAM_026800__ 1179 TCAGGGAAATGAGCTTCCGCCGTACCGAATGGGAAATCTCGCCATTAAAA 1228
BSNT_04323___ 1229 AGGGCTGGCCTTCCATGATGCATACCATTTGGAATAACCCTGAAAAGTAT 1278
||||||||||.||.||||||.||.||||||||||.|||...||.||.|||
RBAM_026800__ 1229 AGGGCTGGCCGTCGATGATGGATTCCATTTGGAACAACAAAGAGAAATAT 1278
BSNT_04323___ 1279 GAATCGTATTTCATGCCGGGCGGCTGGTATGTGTCTGGGGATTCTGCTTA 1328
||.||.||||||||||||||||||||||||||.||.||.|||||||||||
RBAM_026800__ 1279 GATTCTTATTTCATGCCGGGCGGCTGGTATGTTTCCGGAGATTCTGCTTA 1328
BSNT_04323___ 1329 CATGGATGAAGAGGGATACTTTTGGTTCCAAGGCAGAGTTGATGACGTCA 1378
.|||||||||||.||.||.||.|||||||||||||||||.|||||.||||
RBAM_026800__ 1329 TATGGATGAAGACGGTTATTTCTGGTTCCAAGGCAGAGTCGATGATGTCA 1378
BSNT_04323___ 1379 TCATGACCTCCGGTGAGCGCGTCGGCCCATTTGAAGTGGAAAGCAAGCTG 1428
|||||||.|||||.||||||||||||||.||||||||.||||||||.||.
RBAM_026800__ 1379 TCATGACATCCGGCGAGCGCGTCGGCCCGTTTGAAGTCGAAAGCAAACTT 1428
BSNT_04323___ 1429 GTCGAACATCCGGCTATTGCAGAAGCAGGCGTAATCGGAAAACCTGACCC 1478
||.|||||||||||.|||||.|||||.|||||.||||||||.||.|||||
RBAM_026800__ 1429 GTTGAACATCCGGCGATTGCCGAAGCCGGCGTCATCGGAAAGCCGGACCC 1478
BSNT_04323___ 1479 GGTGCGTGGAGAAATCATTAAAGCCTTTATTGCACTCAGGGAAGGATTTG 1528
.||.||.||||||||.||||||||.|||||.||.|||||.|||||...||
RBAM_026800__ 1479 TGTCCGGGGAGAAATTATTAAAGCGTTTATCGCGCTCAGAGAAGGGCATG 1528
BSNT_04323___ 1529 AGCCTTCTGATAAACTGAAAGAAGAGATCCGCCTATTCGTAAAGCAGGGT 1578
||||.||.|||.|.|||||.||.||.||.|||||.||.|||||.|||||.
RBAM_026800__ 1529 AGCCATCCGATCAGCTGAAGGAGGACATTCGCCTCTTTGTAAAACAGGGG 1578
BSNT_04323___ 1579 CTTGCAGCCCATGCGGCTCCGCGTGAGATCGAATTTAAAGATAAGCTTCC 1628
|||||.||.|||||.||.|||||.||.||.|||||.||||||||.|||||
RBAM_026800__ 1579 CTTGCCGCGCATGCCGCACCGCGGGAAATTGAATTCAAAGATAAACTTCC 1628
BSNT_04323___ 1629 GAAAACCCGAAGCGGAAAGATCATGAGGCGCGTGCTGAAGGCATGGGAGC 1678
||||||.||.||||||||.||||||||.||.|||||||||||.|||||||
RBAM_026800__ 1629 GAAAACACGGAGCGGAAAAATCATGAGACGTGTGCTGAAGGCGTGGGAGC 1678
BSNT_04323___ 1679 TTAATCTTCCTGCTGGAGATCTGTCAACAATGGAGGATTAA 1719
|.||.||.||.||.||.||.|||||.||||||||.||||||
RBAM_026800__ 1679 TGAACCTGCCGGCAGGCGACCTGTCCACAATGGAAGATTAA 1719
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