Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04322 and RBAM_026790

See Amino acid alignment / Visit BSNT_04322 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:47
# Commandline: needle
#    -asequence dna-align/BSNT_04322___tyrS.1.9828.seq
#    -bsequence dna-align/RBAM_026790___tyrS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04322___tyrS-RBAM_026790___tyrS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04322___tyrS-RBAM_026790___tyrS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04322___tyrS
# 2: RBAM_026790___tyrS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1275
# Identity:    1048/1275 (82.2%)
# Similarity:  1048/1275 (82.2%)
# Gaps:          15/1275 ( 1.2%)
# Score: 4358.0
# 
#
#=======================================

BSNT_04322___      1 ATGACAAACTTACTTGAAGACTTATCCTTCCGCGGATTGATTCAGCAAAT     50
                     |||||.||||||.|.||.||.|||||.||||||||.||.||.||||||||
RBAM_026790__      1 ATGACTAACTTATTAGAGGATTTATCATTCCGCGGCTTAATCCAGCAAAT     50

BSNT_04322___     51 GACAGATGAAGAAGGGTTAAATAAACAGCTGAATGAAGAAAAAATCCGCT    100
                     |||.|||||||||||..|.||||||||||||||.||.|||||||||||.|
RBAM_026790__     51 GACGGATGAAGAAGGACTGAATAAACAGCTGAACGAGGAAAAAATCCGTT    100

BSNT_04322___    101 TGTACTCAGGCTTTGACCCGACAGCAGACAGCTTGCATATCGGACACCTG    150
                     |.||||||||.|||||||||||.||.||||||.||||.|||||||||||.
RBAM_026790__    101 TATACTCAGGGTTTGACCCGACGGCTGACAGCCTGCACATCGGACACCTT    150

BSNT_04322___    151 CTGCCTATTTTAACACTTCGCCGTTTTCAGCTTGCGGGGCATCATCCGAT    200
                     |||||.||.||.|||||.||||||||.||||||||.||.||.||||||||
RBAM_026790__    151 CTGCCGATATTGACACTGCGCCGTTTCCAGCTTGCAGGCCACCATCCGAT    200

BSNT_04322___    201 TGCGCTTGTGGGCGGCGCGACGGGCCTCATCGGTGATCCAAGCGGAAAAA    250
                     |||||||||.||||||||||||||.||.|||||.|||||.|||||.||||
RBAM_026790__    201 TGCGCTTGTAGGCGGCGCGACGGGACTGATCGGCGATCCGAGCGGCAAAA    250

BSNT_04322___    251 AAGCAGAGCGTACATTAAACACTGCTGACATCGTATCCGAATGGTCCCAA    300
                     ||||.||.|||||.|||||.|||...||.|||||...|||||||||.|||
RBAM_026790__    251 AAGCGGAACGTACGTTAAATACTCAGGATATCGTTGTCGAATGGTCGCAA    300

BSNT_04322___    301 AAAATCAAAAACCAGCTGTCCAGATTTCTAGATTTTGAAGCAGCAGAAAA    350
                     |||||.|||||.|||||.||..|||||.|||||||.||.||.|.||||||
RBAM_026790__    301 AAAATTAAAAATCAGCTTTCACGATTTTTAGATTTCGAGGCCGGAGAAAA    350

BSNT_04322___    351 CCCAGCTGTCATCGCGAACAACTTTGACTGGATCGGCAAAATGAATGTGA    400
                     |||.||||||||.||||||||||||||.||||||||.||..|||...|.|
RBAM_026790__    351 CCCCGCTGTCATAGCGAACAACTTTGATTGGATCGGAAAGCTGAGCATTA    400

BSNT_04322___    401 TCGATTTCCTTCGTGACGTTGGTAAAAATTTCGGCATCAATTACATGCTG    450
                     |.||.||.||.||||||||.||.||.||.|||||.||.||.||||||||.
RBAM_026790__    401 TTGAATTTCTCCGTGACGTCGGAAAGAACTTCGGAATTAACTACATGCTT    450

BSNT_04322___    451 GCAAAAGATACGGTCAGCTCAAGAATTGAATCAGGCATCTCGTACACTGA    500
                     ||.||||||||.||.|||||||||||||||.|.||.||.||.|||||.||
RBAM_026790__    451 GCGAAAGATACTGTAAGCTCAAGAATTGAAACCGGAATTTCTTACACGGA    500

BSNT_04322___    501 ATTCAGCTACATGATTCTTCAATCTTATGATTTCTTAAATCTTTACAGAG    550
                     |||||||||||||||.||.|||||.||.|||||..|.|||||.|||||||
RBAM_026790__    501 ATTCAGCTACATGATCCTGCAATCCTACGATTTTCTGAATCTGTACAGAG    550

BSNT_04322___    551 ACAAAAACTGTAAACTGCAAATCGGCGGAAGCGATCAGTGGGGCAATATC    600
                     |.||.|||||.|||||.||||||||.||.||.||.|||||||||||.|||
RBAM_026790__    551 AAAAGAACTGCAAACTCCAAATCGGAGGCAGTGACCAGTGGGGCAACATC    600

BSNT_04322___    601 ACAGCGGGTCTTGAACTGATCAGAAAATCAGAAGAAGAAGGAGCAAAAGC    650
                     ||.||.|||||||||||||||||||||||||||||||||||.||.|||||
RBAM_026790__    601 ACGGCCGGTCTTGAACTGATCAGAAAATCAGAAGAAGAAGGGGCGAAAGC    650

BSNT_04322___    651 GTTCGGCCTAACGATTCCGCTTGTCACAAAAGCAGACGGCACGAAGTTCG    700
                     .|||||.||.||.||||||||.|||||||||||.|||||||||||.||||
RBAM_026790__    651 TTTCGGTCTTACCATTCCGCTCGTCACAAAAGCTGACGGCACGAAATTCG    700

BSNT_04322___    701 GAAAAACGGAAGGCGGCGCGATCTGGCTTGATAAAGAAAAAACATCGCCA    750
                     |.|||||||||||||||||.||.||||||||||||||||||||||||||.
RBAM_026790__    701 GCAAAACGGAAGGCGGCGCCATTTGGCTTGATAAAGAAAAAACATCGCCG    750

BSNT_04322___    751 TATGAATTCTATCAATTCTGGATCAACACAGACGACCGTGACGTTGTCAA    800
                     ||.||||||||.||.|||||||||||.|||||.|||||.|||||.|||||
RBAM_026790__    751 TACGAATTCTACCAGTTCTGGATCAATACAGATGACCGCGACGTCGTCAA    800

BSNT_04322___    801 ATACTTGAAATACTTTACGTTCCTTTCAAAAGAGGAAATTGAAGCATACG    850
                     ||||||.|||||||||||.|||.|.||||||||||||||||||||.||.|
RBAM_026790__    801 ATACTTAAAATACTTTACTTTCTTATCAAAAGAGGAAATTGAAGCTTATG    850

BSNT_04322___    851 CTGAAAAAACAGAAACGGCGCCAGAAAAACGTGAAGCGCAAAAACGCCTG    900
                     ||||||||||.||.|||||.||.||.|||.|.||||||||.|||||.||.
RBAM_026790__    851 CTGAAAAAACGGAGACGGCTCCTGAGAAAAGAGAAGCGCAGAAACGTCTC    900

BSNT_04322___    901 GCAGAAGAAGTGACATCACTTGTTCACGGACGCGAGGCGCTGGAGCAAGC    950
                     ||.|||||.|||||....|||||.|||||.|||||.|||||.|||||.||
RBAM_026790__    901 GCTGAAGAGGTGACTGTTCTTGTACACGGCCGCGAAGCGCTTGAGCAGGC    950

BSNT_04322___    951 CATCAACATCTCCCAAGCGCTGTTCAGCGGCAATATTAAAGAGCTTTCTG   1000
                     |.|..|.||||||||.||||||||||||||||||||||||||||||||.|
RBAM_026790__    951 CGTTCATATCTCCCAGGCGCTGTTCAGCGGCAATATTAAAGAGCTTTCCG   1000

BSNT_04322___   1001 CTCAAGACGTAAAAGTAGGCTTTAAAGATGTTCCTTCTATGGAAGTTGAC   1050
                     ||||||||||.||.|||||.|||||||||||.|||||..|.|||...|||
RBAM_026790__   1001 CTCAAGACGTCAAGGTAGGATTTAAAGATGTGCCTTCGTTTGAAAAAGAC   1050

BSNT_04322___   1051 AGCACCCAAGAGCTTTCACTTGTAGATGTGTTGGTGCAATCTAAATTATC   1100
                     .||.|..||||.||.||..|.|||||.|||.|.|||.||||||||||.||
RBAM_026790__   1051 CGCTCTGAAGAACTGTCTTTAGTAGACGTGCTTGTGGAATCTAAATTGTC   1100

BSNT_04322___   1101 TCCTTCTAAACGCCAAGCGCGTGAAGACATCCAAAACGGAGCTGTTTACA   1150
                     .|||||.|||||.||.||.||.||||||||.|||||||||||||||||||
RBAM_026790__   1101 GCCTTCAAAACGGCAGGCCCGCGAAGACATTCAAAACGGAGCTGTTTACA   1150

BSNT_04322___   1151 TTAACGGCGAACGCCAAACAGAAAT-----AAATTATACCCTATCGGCTG   1195
                     ||||||||||.|||||.||.||.||     |..||     ||..|.||.|
RBAM_026790__   1151 TTAACGGCGAGCGCCAGACGGACATCGGGCATCTT-----CTGACTGCGG   1195

BSNT_04322___   1196 AAGACCGCATCGAAAATCAATTTACTGTTCTGCGCCGCGGGAAGAAAAAA   1245
                     ||||||||||.|||.||||||||||.||.|||||||||||.|||||||||
RBAM_026790__   1196 AAGACCGCATTGAAGATCAATTTACCGTACTGCGCCGCGGAAAGAAAAAA   1245

BSNT_04322___   1246 TACTTCCTTGTGACGTA-TAAATAA   1269
                     ||||||||..|.||||| |.|    
RBAM_026790__   1246 TACTTCCTGATCACGTACTGA----   1266


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