Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04322 and RBAM_026790
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:47
# Commandline: needle
# -asequence dna-align/BSNT_04322___tyrS.1.9828.seq
# -bsequence dna-align/RBAM_026790___tyrS.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04322___tyrS-RBAM_026790___tyrS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04322___tyrS-RBAM_026790___tyrS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04322___tyrS
# 2: RBAM_026790___tyrS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1275
# Identity: 1048/1275 (82.2%)
# Similarity: 1048/1275 (82.2%)
# Gaps: 15/1275 ( 1.2%)
# Score: 4358.0
#
#
#=======================================
BSNT_04322___ 1 ATGACAAACTTACTTGAAGACTTATCCTTCCGCGGATTGATTCAGCAAAT 50
|||||.||||||.|.||.||.|||||.||||||||.||.||.||||||||
RBAM_026790__ 1 ATGACTAACTTATTAGAGGATTTATCATTCCGCGGCTTAATCCAGCAAAT 50
BSNT_04322___ 51 GACAGATGAAGAAGGGTTAAATAAACAGCTGAATGAAGAAAAAATCCGCT 100
|||.|||||||||||..|.||||||||||||||.||.|||||||||||.|
RBAM_026790__ 51 GACGGATGAAGAAGGACTGAATAAACAGCTGAACGAGGAAAAAATCCGTT 100
BSNT_04322___ 101 TGTACTCAGGCTTTGACCCGACAGCAGACAGCTTGCATATCGGACACCTG 150
|.||||||||.|||||||||||.||.||||||.||||.|||||||||||.
RBAM_026790__ 101 TATACTCAGGGTTTGACCCGACGGCTGACAGCCTGCACATCGGACACCTT 150
BSNT_04322___ 151 CTGCCTATTTTAACACTTCGCCGTTTTCAGCTTGCGGGGCATCATCCGAT 200
|||||.||.||.|||||.||||||||.||||||||.||.||.||||||||
RBAM_026790__ 151 CTGCCGATATTGACACTGCGCCGTTTCCAGCTTGCAGGCCACCATCCGAT 200
BSNT_04322___ 201 TGCGCTTGTGGGCGGCGCGACGGGCCTCATCGGTGATCCAAGCGGAAAAA 250
|||||||||.||||||||||||||.||.|||||.|||||.|||||.||||
RBAM_026790__ 201 TGCGCTTGTAGGCGGCGCGACGGGACTGATCGGCGATCCGAGCGGCAAAA 250
BSNT_04322___ 251 AAGCAGAGCGTACATTAAACACTGCTGACATCGTATCCGAATGGTCCCAA 300
||||.||.|||||.|||||.|||...||.|||||...|||||||||.|||
RBAM_026790__ 251 AAGCGGAACGTACGTTAAATACTCAGGATATCGTTGTCGAATGGTCGCAA 300
BSNT_04322___ 301 AAAATCAAAAACCAGCTGTCCAGATTTCTAGATTTTGAAGCAGCAGAAAA 350
|||||.|||||.|||||.||..|||||.|||||||.||.||.|.||||||
RBAM_026790__ 301 AAAATTAAAAATCAGCTTTCACGATTTTTAGATTTCGAGGCCGGAGAAAA 350
BSNT_04322___ 351 CCCAGCTGTCATCGCGAACAACTTTGACTGGATCGGCAAAATGAATGTGA 400
|||.||||||||.||||||||||||||.||||||||.||..|||...|.|
RBAM_026790__ 351 CCCCGCTGTCATAGCGAACAACTTTGATTGGATCGGAAAGCTGAGCATTA 400
BSNT_04322___ 401 TCGATTTCCTTCGTGACGTTGGTAAAAATTTCGGCATCAATTACATGCTG 450
|.||.||.||.||||||||.||.||.||.|||||.||.||.||||||||.
RBAM_026790__ 401 TTGAATTTCTCCGTGACGTCGGAAAGAACTTCGGAATTAACTACATGCTT 450
BSNT_04322___ 451 GCAAAAGATACGGTCAGCTCAAGAATTGAATCAGGCATCTCGTACACTGA 500
||.||||||||.||.|||||||||||||||.|.||.||.||.|||||.||
RBAM_026790__ 451 GCGAAAGATACTGTAAGCTCAAGAATTGAAACCGGAATTTCTTACACGGA 500
BSNT_04322___ 501 ATTCAGCTACATGATTCTTCAATCTTATGATTTCTTAAATCTTTACAGAG 550
|||||||||||||||.||.|||||.||.|||||..|.|||||.|||||||
RBAM_026790__ 501 ATTCAGCTACATGATCCTGCAATCCTACGATTTTCTGAATCTGTACAGAG 550
BSNT_04322___ 551 ACAAAAACTGTAAACTGCAAATCGGCGGAAGCGATCAGTGGGGCAATATC 600
|.||.|||||.|||||.||||||||.||.||.||.|||||||||||.|||
RBAM_026790__ 551 AAAAGAACTGCAAACTCCAAATCGGAGGCAGTGACCAGTGGGGCAACATC 600
BSNT_04322___ 601 ACAGCGGGTCTTGAACTGATCAGAAAATCAGAAGAAGAAGGAGCAAAAGC 650
||.||.|||||||||||||||||||||||||||||||||||.||.|||||
RBAM_026790__ 601 ACGGCCGGTCTTGAACTGATCAGAAAATCAGAAGAAGAAGGGGCGAAAGC 650
BSNT_04322___ 651 GTTCGGCCTAACGATTCCGCTTGTCACAAAAGCAGACGGCACGAAGTTCG 700
.|||||.||.||.||||||||.|||||||||||.|||||||||||.||||
RBAM_026790__ 651 TTTCGGTCTTACCATTCCGCTCGTCACAAAAGCTGACGGCACGAAATTCG 700
BSNT_04322___ 701 GAAAAACGGAAGGCGGCGCGATCTGGCTTGATAAAGAAAAAACATCGCCA 750
|.|||||||||||||||||.||.||||||||||||||||||||||||||.
RBAM_026790__ 701 GCAAAACGGAAGGCGGCGCCATTTGGCTTGATAAAGAAAAAACATCGCCG 750
BSNT_04322___ 751 TATGAATTCTATCAATTCTGGATCAACACAGACGACCGTGACGTTGTCAA 800
||.||||||||.||.|||||||||||.|||||.|||||.|||||.|||||
RBAM_026790__ 751 TACGAATTCTACCAGTTCTGGATCAATACAGATGACCGCGACGTCGTCAA 800
BSNT_04322___ 801 ATACTTGAAATACTTTACGTTCCTTTCAAAAGAGGAAATTGAAGCATACG 850
||||||.|||||||||||.|||.|.||||||||||||||||||||.||.|
RBAM_026790__ 801 ATACTTAAAATACTTTACTTTCTTATCAAAAGAGGAAATTGAAGCTTATG 850
BSNT_04322___ 851 CTGAAAAAACAGAAACGGCGCCAGAAAAACGTGAAGCGCAAAAACGCCTG 900
||||||||||.||.|||||.||.||.|||.|.||||||||.|||||.||.
RBAM_026790__ 851 CTGAAAAAACGGAGACGGCTCCTGAGAAAAGAGAAGCGCAGAAACGTCTC 900
BSNT_04322___ 901 GCAGAAGAAGTGACATCACTTGTTCACGGACGCGAGGCGCTGGAGCAAGC 950
||.|||||.|||||....|||||.|||||.|||||.|||||.|||||.||
RBAM_026790__ 901 GCTGAAGAGGTGACTGTTCTTGTACACGGCCGCGAAGCGCTTGAGCAGGC 950
BSNT_04322___ 951 CATCAACATCTCCCAAGCGCTGTTCAGCGGCAATATTAAAGAGCTTTCTG 1000
|.|..|.||||||||.||||||||||||||||||||||||||||||||.|
RBAM_026790__ 951 CGTTCATATCTCCCAGGCGCTGTTCAGCGGCAATATTAAAGAGCTTTCCG 1000
BSNT_04322___ 1001 CTCAAGACGTAAAAGTAGGCTTTAAAGATGTTCCTTCTATGGAAGTTGAC 1050
||||||||||.||.|||||.|||||||||||.|||||..|.|||...|||
RBAM_026790__ 1001 CTCAAGACGTCAAGGTAGGATTTAAAGATGTGCCTTCGTTTGAAAAAGAC 1050
BSNT_04322___ 1051 AGCACCCAAGAGCTTTCACTTGTAGATGTGTTGGTGCAATCTAAATTATC 1100
.||.|..||||.||.||..|.|||||.|||.|.|||.||||||||||.||
RBAM_026790__ 1051 CGCTCTGAAGAACTGTCTTTAGTAGACGTGCTTGTGGAATCTAAATTGTC 1100
BSNT_04322___ 1101 TCCTTCTAAACGCCAAGCGCGTGAAGACATCCAAAACGGAGCTGTTTACA 1150
.|||||.|||||.||.||.||.||||||||.|||||||||||||||||||
RBAM_026790__ 1101 GCCTTCAAAACGGCAGGCCCGCGAAGACATTCAAAACGGAGCTGTTTACA 1150
BSNT_04322___ 1151 TTAACGGCGAACGCCAAACAGAAAT-----AAATTATACCCTATCGGCTG 1195
||||||||||.|||||.||.||.|| |..|| ||..|.||.|
RBAM_026790__ 1151 TTAACGGCGAGCGCCAGACGGACATCGGGCATCTT-----CTGACTGCGG 1195
BSNT_04322___ 1196 AAGACCGCATCGAAAATCAATTTACTGTTCTGCGCCGCGGGAAGAAAAAA 1245
||||||||||.|||.||||||||||.||.|||||||||||.|||||||||
RBAM_026790__ 1196 AAGACCGCATTGAAGATCAATTTACCGTACTGCGCCGCGGAAAGAAAAAA 1245
BSNT_04322___ 1246 TACTTCCTTGTGACGTA-TAAATAA 1269
||||||||..|.||||| |.|
RBAM_026790__ 1246 TACTTCCTGATCACGTACTGA---- 1266
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