Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04298 and RBAM_026450

See Amino acid alignment / Visit BSNT_04298 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:45
# Commandline: needle
#    -asequence dna-align/BSNT_04298___yteJ.1.9828.seq
#    -bsequence dna-align/RBAM_026450___yteJ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04298___yteJ-RBAM_026450___yteJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04298___yteJ-RBAM_026450___yteJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04298___yteJ
# 2: RBAM_026450___yteJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 511
# Identity:     347/511 (67.9%)
# Similarity:   347/511 (67.9%)
# Gaps:          35/511 ( 6.8%)
# Score: 1116.0
# 
#
#=======================================

BSNT_04298___      1 ATGGACGCGACATATGAAGAGTTAGAGCGCAATGACATCAAAGGCCCGCA     50
                     |||||||||||.||.||||..||..|..||||.|      |||      |
RBAM_026450__      1 ATGGACGCGACTTACGAAGGCTTTCACGGCAAAG------AAG------A     38

BSNT_04298___     51 AGAAGCGGAGCAGCTGACA-------------CATGCCTATGCTGGCTTT     87
                     .|||||.|||||    |||             ||.||.|||||.||||||
RBAM_026450__     39 GGAAGCCGAGCA----ACAGAGGGCGCCCGAGCAGGCATATGCGGGCTTT     84

BSNT_04298___     88 TGGGTTCGTTTCTGGGCTTTCCTGCTTGATTGGCTCGTGATATGGGGATT    137
                     |||.|..|.||.|||||.||.||.|||||||||||.|||.|.||||||.|
RBAM_026450__     85 TGGATCAGGTTTTGGGCGTTTCTTCTTGATTGGCTGGTGGTCTGGGGACT    134

BSNT_04298___    138 AAACCATTTGCTCGTTTCTCCCCTCTTTACCGTATTGGATCTGCCGAAAA    187
                     .||||||.|..|||||||.||..|.||.||..|..||.|.||.|||..||
RBAM_026450__    135 TAACCATCTCATCGTTTCACCGATTTTCACGCTGATGAAGCTCCCGGCAA    184

BSNT_04298___    188 CATCCGGCATGTTTACCTTCTCGGCCTACAGTGTGACAACGCTTATTGTG    237
                     ||..|||.||||||||..||||.||.||....||.|||||.||.||.||.
RBAM_026450__    185 CAAGCGGAATGTTTACAATCTCAGCTTATTCCGTCACAACCCTGATCGTC    234

BSNT_04298___    238 TATCTTGCCTATTTCGCACTAATGACAAAAT-ACTTCAGGCAGACGCTTG    286
                     ||.||.||||||||.|...|.|||||.|||| ..|||| .|||||.||.|
RBAM_026450__    235 TACCTCGCCTATTTTGTGTTCATGACGAAATGGTTTCA-TCAGACACTCG    283

BSNT_04298___    287 GTAAAATGGTGTTCGGCCTCAAAGTGGTTTCTGTGAAG--CGAGATAGCA    334
                     |.||.|||||.|||||..|.||.||...||||.|||.|  || ||.||| 
RBAM_026450__    284 GCAAGATGGTCTTCGGGTTAAAGGTCACTTCTTTGACGCCCG-GAAAGC-    331

BSNT_04298___    335 AGCTGACATGGAGTACAGTGATTTTTCGTGAAGTGGTTGGACGGTATATT    384
                     .||||||.|||||.||.||.|||||..|.||||.|||.||.||.|||||.
RBAM_026450__    332 CGCTGACTTGGAGCACCGTCATTTTCAGAGAAGCGGTGGGGCGTTATATC    381

BSNT_04298___    385 GATAAGATTTGGATTTTATATATCGTTGTTGCTTTTTCACCTACAAAACA    434
                     |||||.||.||||||.|.||||||||..||||.|||.|.||.|.|||.||
RBAM_026450__    382 GATAAAATCTGGATTCTCTATATCGTCATTGCGTTTACGCCCAAAAAGCA    431

BSNT_04298___    435 AGGGATTCATGATTACATCGCGGATACCACCGTGGTGCATGAAAAATTAT    484
                     .||.|||||||||...|||||.||.||.||.|||.|.||.|||....|.|
RBAM_026450__    432 GGGCATTCATGATCTGATCGCCGACACAACGGTGATTCACGAAGCGCTGT    481

BSNT_04298___    485 ACCGCAAATAA    495
                     |.|||||||||
RBAM_026450__    482 ATCGCAAATAA    492


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