Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04286 and RBAM_026370

See Amino acid alignment / Visit BSNT_04286 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:44
# Commandline: needle
#    -asequence dna-align/BSNT_04286___argH.1.9828.seq
#    -bsequence dna-align/RBAM_026370___argH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04286___argH-RBAM_026370___argH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04286___argH-RBAM_026370___argH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04286___argH
# 2: RBAM_026370___argH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1393
# Identity:    1160/1393 (83.3%)
# Similarity:  1160/1393 (83.3%)
# Gaps:          23/1393 ( 1.7%)
# Score: 4872.5
# 
#
#=======================================

BSNT_04286___      1 ATGAAGAAGCTTTGGGGAGGCCGATTTCAAAAAACACCGGAAAAATGGGT     50
                     |||||||||||||||||||||||.||||||||||||||||||||.|||||
RBAM_026370__      1 ATGAAGAAGCTTTGGGGAGGCCGTTTTCAAAAAACACCGGAAAAGTGGGT     50

BSNT_04286___     51 CGACGAGTTCGGCGCGTCCATATCATTTGACCAACATTTAGTTGCTGAAG    100
                     |||.|||||||||||.|||||..||||.||||||.|.|||||....||.|
RBAM_026370__     51 CGATGAGTTCGGCGCATCCATCACATTCGACCAAAACTTAGTCAAAGAGG    100

BSNT_04286___    101 ACATTACAGGGTCTCTCGCACATGCTGCCATGCTGAAAAAATGCGGTATT    150
                     |.|||||||||||||||||.|||||.||.|||||||||||||||||.|||
RBAM_026370__    101 ATATTACAGGGTCTCTCGCTCATGCGGCAATGCTGAAAAAATGCGGCATT    150

BSNT_04286___    151 CTGACAGCAGAAGAAGA----GCTGAAAATCCGAGAGGGCCTGAATACCC    196
                     |||||.|.|||||||||    ||    .||||||.||||.|||.|.||||
RBAM_026370__    151 CTGACGGAAGAAGAAGAAGGCGC----CATCCGACAGGGGCTGCAGACCC    196

BSNT_04286___    197 TTTTGCAAAAAGCAGAGGAGGGAACATTGGAATTCTCAGTCGATTATGAG    246
                     |..||||||||||||||||.|||||..|.||||||||.||.||||||||.
RBAM_026370__    197 TCCTGCAAAAAGCAGAGGAAGGAACGCTTGAATTCTCTGTTGATTATGAA    246

BSNT_04286___    247 GATATTCATTTGAACATTGAGAAAATGCTCATTGACGAAATCGGTCCTCT    296
                     |||||.||||||||.|||||.||||||||.||.||.||||||||.||.||
RBAM_026370__    247 GATATCCATTTGAATATTGAAAAAATGCTGATCGAAGAAATCGGACCGCT    296

BSNT_04286___    297 TGGCGGCAAGCTGCATACCGGCAGAAGTCGGAATGACCAGGTGGCGACTG    346
                     .|||||||||||.||||||||||||||.||||||||||||||||||||.|
RBAM_026370__    297 AGGCGGCAAGCTCCATACCGGCAGAAGCCGGAATGACCAGGTGGCGACCG    346

BSNT_04286___    347 ACATGCATTTATACTTGAAGAATCATGTCGGCCACATCATCGAGCTGATT    396
                     ||||||||||.||.|||||..||||||||...||.|||||||.|||||||
RBAM_026370__    347 ACATGCATTTGTATTTGAAAGATCATGTCTCACATATCATCGTGCTGATT    396

BSNT_04286___    397 GAGGCA-TTCCAAAGTGCGCTGATTGAAAAGGCGGAAGCGAACGTTGAAA    445
                     || .|| |||||||..||||||||.|||||.|||||.||.||.||.||.|
RBAM_026370__    397 GA-ACAGTTCCAAAAAGCGCTGATCGAAAAAGCGGAGGCCAATGTCGAGA    445

BSNT_04286___    446 CGATTCTGCCGGGCTACACACATCTGCAGCGCGCCCAGCCGATTTCATTC    495
                     |.|||||||||||.|||||.|||.|||||||.||.|||||||||||.|||
RBAM_026370__    446 CCATTCTGCCGGGGTACACCCATTTGCAGCGGGCTCAGCCGATTTCTTTC    495

BSNT_04286___    496 GCTCACCATCTGCTTGCGTATTTCTGGATGCTTGAGCGCGACAAGGAGCG    545
                     ||.||||||||||||||.|||||.|||||||||||.||.||.||.|||||
RBAM_026370__    496 GCCCACCATCTGCTTGCTTATTTTTGGATGCTTGAACGGGATAAAGAGCG    545

BSNT_04286___    546 TTTTCAGGATTCGATGAAGCGGATTAACAAATCTCCGCTCGGCTGCGGGG    595
                     |||||..|||.|.||||||||||||||||.|||.||||||||.|||||||
RBAM_026370__    546 TTTTCGCGATGCTATGAAGCGGATTAACATATCGCCGCTCGGATGCGGGG    595

BSNT_04286___    596 CGCTCGCGGGAACAACCTTCCCAATTGACCGTGATTATTCAGCAGAACTG    645
                     ||||.||.|||||.||.||.||.||.||||||.|.|||||.||.||.|||
RBAM_026370__    596 CGCTTGCCGGAACCACTTTTCCGATAGACCGTAACTATTCGGCGGAGCTG    645

BSNT_04286___    646 CTCGGCTTTGATGCCATTTATGAAAACAG-CTTGGACGGCGTCAGCGACA    694
                     |||||.|||||..||||||||||.||||| ||| |||||.|||||.||||
RBAM_026370__    646 CTCGGTTTTGACTCCATTTATGAGAACAGTCTT-GACGGAGTCAGTGACA    694

BSNT_04286___    695 GAGACTTCATTTTGGAGTTTTTAAGCAACAGCAGTATGCTGATGATGCAC    744
                     ||||.||.|||.|.||||||||||||..||||||.|||||||||||||||
RBAM_026370__    695 GAGATTTTATTCTCGAGTTTTTAAGCGGCAGCAGCATGCTGATGATGCAC    744

BSNT_04286___    745 CTATCCCGTTTCTCTGAAGAAATCATTTTATGGTGCTCGCAGGAGTTTAA    794
                     ||.||.|||||.||.||||||||||||.||||||||||||||||.||.|.
RBAM_026370__    745 CTTTCGCGTTTATCAGAAGAAATCATTCTATGGTGCTCGCAGGAATTCAG    794

BSNT_04286___    795 ATTCATCGAGCTTGACGATACGTACGCAACAGGAAGCAGCATGATGCCGC    844
                     ||||||.||.||.||.||||||||.||.||.|||||||||||||||||||
RBAM_026370__    795 ATTCATTGAACTGGATGATACGTATGCGACGGGAAGCAGCATGATGCCGC    844

BSNT_04286___    845 AAAAGAAAAACCCTGATATGGCGGAGCTGATCCGCGGCAAAACAGGACGC    894
                     |.|||||||||||.||.||||||||||||||||||||.|||||.||||||
RBAM_026370__    845 AGAAGAAAAACCCCGACATGGCGGAGCTGATCCGCGGTAAAACCGGACGC    894

BSNT_04286___    895 GTATACGGCGATATGATGGGTCTGTTTACGATCATGAAAGGACTTCCGCT    944
                     ||||||||.|||||||||||.||.||.|||||.||||||||.||.|||||
RBAM_026370__    895 GTATACGGTGATATGATGGGGCTTTTCACGATTATGAAAGGGCTCCCGCT    944

BSNT_04286___    945 CGCTTACAACAAAGATCTGCAGGAAGACAAAGAGGGCATGTTTGACACGG    994
                     |||||||||||||||.|||||||||||.|||||.||||||||||||||||
RBAM_026370__    945 CGCTTACAACAAAGACCTGCAGGAAGATAAAGAAGGCATGTTTGACACGG    994

BSNT_04286___    995 TGAAAACGGTGGAAGGCAGCCTGCAAATCTTCACAGGCATGATCCAAACA   1044
                     |||||||.||.|||||.|||||.||.||.|||||.||||||||..||||.
RBAM_026370__    995 TGAAAACCGTTGAAGGAAGCCTTCAGATTTTCACGGGCATGATTGAAACG   1044

BSNT_04286___   1045 ATGACTGTAAACAAAGACGTCATGAAGCAAGCGACAAAACAAGACTTTTC   1094
                     ||||..||||||||||||.|||||||.|||||||||||||||||.|||||
RBAM_026370__   1045 ATGAAAGTAAACAAAGACATCATGAAACAAGCGACAAAACAAGATTTTTC   1094

BSNT_04286___   1095 AAATGCGACGGAACTGGCCGATTATTTAGCTAAAAAAGGAATGCCGTTCA   1144
                     |||.|||||||||||.|||||||||||||||||||||||.||||||||||
RBAM_026370__   1095 AAACGCGACGGAACTTGCCGATTATTTAGCTAAAAAAGGCATGCCGTTCA   1144

BSNT_04286___   1145 GAGAAGCGCATGAAGTGGTCGGGAAACTTGTGTACACATGCATCGAAAGA   1194
                     ||||||||||||||||||||||.||.||||||||||..|||||.||||.|
RBAM_026370__   1145 GAGAAGCGCATGAAGTGGTCGGCAAGCTTGTGTACAGCTGCATTGAAAAA   1194

BSNT_04286___   1195 GGGATCTATTTAAGCGATATGCCGATTGGCGAGTTTCAGCAGGCTAGCAC   1244
                     ||.|||||||||||.||||||.|..|||..||.||.|..||.||.||||.
RBAM_026370__   1195 GGAATCTATTTAAGTGATATGGCATTTGAAGAATTCCTTCAAGCCAGCAG   1244

BSNT_04286___   1245 ACTATTCGAAGAAGATATTTACACTGTGTTAGACCCTTACTACGCAGTTG   1294
                     .||.||.||||||||.||.||.||.|||.|.||.||..|..|.||.||||
RBAM_026370__   1245 TCTCTTTGAAGAAGACATCTATACCGTGCTCGATCCGCATCATGCGGTTG   1294

BSNT_04286___   1295 AAAAAAGAATGAGCGCCGGGGGCACCGGATTTAAACAGGTAAAGCAGGCG   1344
                     |||||||||||||||||||.||.||.||.|||.|.||||||.|.||||||
RBAM_026370__   1295 AAAAAAGAATGAGCGCCGGCGGAACGGGTTTTCAGCAGGTAGAACAGGCG   1344

BSNT_04286___   1345 CTTGAAAAAGCGAAAGCTTGCG-TGGCAGCTGGAGTTTGTTAA   1386
                     ||.|.||||||.|||||.|||| .||||          .||||
RBAM_026370__   1345 CTCGTAAAAGCAAAAGCCTGCGCCGGCA----------TTTAA   1377


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