Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04286 and RBAM_026370
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:44
# Commandline: needle
# -asequence dna-align/BSNT_04286___argH.1.9828.seq
# -bsequence dna-align/RBAM_026370___argH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04286___argH-RBAM_026370___argH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04286___argH-RBAM_026370___argH.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04286___argH
# 2: RBAM_026370___argH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1393
# Identity: 1160/1393 (83.3%)
# Similarity: 1160/1393 (83.3%)
# Gaps: 23/1393 ( 1.7%)
# Score: 4872.5
#
#
#=======================================
BSNT_04286___ 1 ATGAAGAAGCTTTGGGGAGGCCGATTTCAAAAAACACCGGAAAAATGGGT 50
|||||||||||||||||||||||.||||||||||||||||||||.|||||
RBAM_026370__ 1 ATGAAGAAGCTTTGGGGAGGCCGTTTTCAAAAAACACCGGAAAAGTGGGT 50
BSNT_04286___ 51 CGACGAGTTCGGCGCGTCCATATCATTTGACCAACATTTAGTTGCTGAAG 100
|||.|||||||||||.|||||..||||.||||||.|.|||||....||.|
RBAM_026370__ 51 CGATGAGTTCGGCGCATCCATCACATTCGACCAAAACTTAGTCAAAGAGG 100
BSNT_04286___ 101 ACATTACAGGGTCTCTCGCACATGCTGCCATGCTGAAAAAATGCGGTATT 150
|.|||||||||||||||||.|||||.||.|||||||||||||||||.|||
RBAM_026370__ 101 ATATTACAGGGTCTCTCGCTCATGCGGCAATGCTGAAAAAATGCGGCATT 150
BSNT_04286___ 151 CTGACAGCAGAAGAAGA----GCTGAAAATCCGAGAGGGCCTGAATACCC 196
|||||.|.||||||||| || .||||||.||||.|||.|.||||
RBAM_026370__ 151 CTGACGGAAGAAGAAGAAGGCGC----CATCCGACAGGGGCTGCAGACCC 196
BSNT_04286___ 197 TTTTGCAAAAAGCAGAGGAGGGAACATTGGAATTCTCAGTCGATTATGAG 246
|..||||||||||||||||.|||||..|.||||||||.||.||||||||.
RBAM_026370__ 197 TCCTGCAAAAAGCAGAGGAAGGAACGCTTGAATTCTCTGTTGATTATGAA 246
BSNT_04286___ 247 GATATTCATTTGAACATTGAGAAAATGCTCATTGACGAAATCGGTCCTCT 296
|||||.||||||||.|||||.||||||||.||.||.||||||||.||.||
RBAM_026370__ 247 GATATCCATTTGAATATTGAAAAAATGCTGATCGAAGAAATCGGACCGCT 296
BSNT_04286___ 297 TGGCGGCAAGCTGCATACCGGCAGAAGTCGGAATGACCAGGTGGCGACTG 346
.|||||||||||.||||||||||||||.||||||||||||||||||||.|
RBAM_026370__ 297 AGGCGGCAAGCTCCATACCGGCAGAAGCCGGAATGACCAGGTGGCGACCG 346
BSNT_04286___ 347 ACATGCATTTATACTTGAAGAATCATGTCGGCCACATCATCGAGCTGATT 396
||||||||||.||.|||||..||||||||...||.|||||||.|||||||
RBAM_026370__ 347 ACATGCATTTGTATTTGAAAGATCATGTCTCACATATCATCGTGCTGATT 396
BSNT_04286___ 397 GAGGCA-TTCCAAAGTGCGCTGATTGAAAAGGCGGAAGCGAACGTTGAAA 445
|| .|| |||||||..||||||||.|||||.|||||.||.||.||.||.|
RBAM_026370__ 397 GA-ACAGTTCCAAAAAGCGCTGATCGAAAAAGCGGAGGCCAATGTCGAGA 445
BSNT_04286___ 446 CGATTCTGCCGGGCTACACACATCTGCAGCGCGCCCAGCCGATTTCATTC 495
|.|||||||||||.|||||.|||.|||||||.||.|||||||||||.|||
RBAM_026370__ 446 CCATTCTGCCGGGGTACACCCATTTGCAGCGGGCTCAGCCGATTTCTTTC 495
BSNT_04286___ 496 GCTCACCATCTGCTTGCGTATTTCTGGATGCTTGAGCGCGACAAGGAGCG 545
||.||||||||||||||.|||||.|||||||||||.||.||.||.|||||
RBAM_026370__ 496 GCCCACCATCTGCTTGCTTATTTTTGGATGCTTGAACGGGATAAAGAGCG 545
BSNT_04286___ 546 TTTTCAGGATTCGATGAAGCGGATTAACAAATCTCCGCTCGGCTGCGGGG 595
|||||..|||.|.||||||||||||||||.|||.||||||||.|||||||
RBAM_026370__ 546 TTTTCGCGATGCTATGAAGCGGATTAACATATCGCCGCTCGGATGCGGGG 595
BSNT_04286___ 596 CGCTCGCGGGAACAACCTTCCCAATTGACCGTGATTATTCAGCAGAACTG 645
||||.||.|||||.||.||.||.||.||||||.|.|||||.||.||.|||
RBAM_026370__ 596 CGCTTGCCGGAACCACTTTTCCGATAGACCGTAACTATTCGGCGGAGCTG 645
BSNT_04286___ 646 CTCGGCTTTGATGCCATTTATGAAAACAG-CTTGGACGGCGTCAGCGACA 694
|||||.|||||..||||||||||.||||| ||| |||||.|||||.||||
RBAM_026370__ 646 CTCGGTTTTGACTCCATTTATGAGAACAGTCTT-GACGGAGTCAGTGACA 694
BSNT_04286___ 695 GAGACTTCATTTTGGAGTTTTTAAGCAACAGCAGTATGCTGATGATGCAC 744
||||.||.|||.|.||||||||||||..||||||.|||||||||||||||
RBAM_026370__ 695 GAGATTTTATTCTCGAGTTTTTAAGCGGCAGCAGCATGCTGATGATGCAC 744
BSNT_04286___ 745 CTATCCCGTTTCTCTGAAGAAATCATTTTATGGTGCTCGCAGGAGTTTAA 794
||.||.|||||.||.||||||||||||.||||||||||||||||.||.|.
RBAM_026370__ 745 CTTTCGCGTTTATCAGAAGAAATCATTCTATGGTGCTCGCAGGAATTCAG 794
BSNT_04286___ 795 ATTCATCGAGCTTGACGATACGTACGCAACAGGAAGCAGCATGATGCCGC 844
||||||.||.||.||.||||||||.||.||.|||||||||||||||||||
RBAM_026370__ 795 ATTCATTGAACTGGATGATACGTATGCGACGGGAAGCAGCATGATGCCGC 844
BSNT_04286___ 845 AAAAGAAAAACCCTGATATGGCGGAGCTGATCCGCGGCAAAACAGGACGC 894
|.|||||||||||.||.||||||||||||||||||||.|||||.||||||
RBAM_026370__ 845 AGAAGAAAAACCCCGACATGGCGGAGCTGATCCGCGGTAAAACCGGACGC 894
BSNT_04286___ 895 GTATACGGCGATATGATGGGTCTGTTTACGATCATGAAAGGACTTCCGCT 944
||||||||.|||||||||||.||.||.|||||.||||||||.||.|||||
RBAM_026370__ 895 GTATACGGTGATATGATGGGGCTTTTCACGATTATGAAAGGGCTCCCGCT 944
BSNT_04286___ 945 CGCTTACAACAAAGATCTGCAGGAAGACAAAGAGGGCATGTTTGACACGG 994
|||||||||||||||.|||||||||||.|||||.||||||||||||||||
RBAM_026370__ 945 CGCTTACAACAAAGACCTGCAGGAAGATAAAGAAGGCATGTTTGACACGG 994
BSNT_04286___ 995 TGAAAACGGTGGAAGGCAGCCTGCAAATCTTCACAGGCATGATCCAAACA 1044
|||||||.||.|||||.|||||.||.||.|||||.||||||||..||||.
RBAM_026370__ 995 TGAAAACCGTTGAAGGAAGCCTTCAGATTTTCACGGGCATGATTGAAACG 1044
BSNT_04286___ 1045 ATGACTGTAAACAAAGACGTCATGAAGCAAGCGACAAAACAAGACTTTTC 1094
||||..||||||||||||.|||||||.|||||||||||||||||.|||||
RBAM_026370__ 1045 ATGAAAGTAAACAAAGACATCATGAAACAAGCGACAAAACAAGATTTTTC 1094
BSNT_04286___ 1095 AAATGCGACGGAACTGGCCGATTATTTAGCTAAAAAAGGAATGCCGTTCA 1144
|||.|||||||||||.|||||||||||||||||||||||.||||||||||
RBAM_026370__ 1095 AAACGCGACGGAACTTGCCGATTATTTAGCTAAAAAAGGCATGCCGTTCA 1144
BSNT_04286___ 1145 GAGAAGCGCATGAAGTGGTCGGGAAACTTGTGTACACATGCATCGAAAGA 1194
||||||||||||||||||||||.||.||||||||||..|||||.||||.|
RBAM_026370__ 1145 GAGAAGCGCATGAAGTGGTCGGCAAGCTTGTGTACAGCTGCATTGAAAAA 1194
BSNT_04286___ 1195 GGGATCTATTTAAGCGATATGCCGATTGGCGAGTTTCAGCAGGCTAGCAC 1244
||.|||||||||||.||||||.|..|||..||.||.|..||.||.||||.
RBAM_026370__ 1195 GGAATCTATTTAAGTGATATGGCATTTGAAGAATTCCTTCAAGCCAGCAG 1244
BSNT_04286___ 1245 ACTATTCGAAGAAGATATTTACACTGTGTTAGACCCTTACTACGCAGTTG 1294
.||.||.||||||||.||.||.||.|||.|.||.||..|..|.||.||||
RBAM_026370__ 1245 TCTCTTTGAAGAAGACATCTATACCGTGCTCGATCCGCATCATGCGGTTG 1294
BSNT_04286___ 1295 AAAAAAGAATGAGCGCCGGGGGCACCGGATTTAAACAGGTAAAGCAGGCG 1344
|||||||||||||||||||.||.||.||.|||.|.||||||.|.||||||
RBAM_026370__ 1295 AAAAAAGAATGAGCGCCGGCGGAACGGGTTTTCAGCAGGTAGAACAGGCG 1344
BSNT_04286___ 1345 CTTGAAAAAGCGAAAGCTTGCG-TGGCAGCTGGAGTTTGTTAA 1386
||.|.||||||.|||||.|||| .|||| .||||
RBAM_026370__ 1345 CTCGTAAAAGCAAAAGCCTGCGCCGGCA----------TTTAA 1377
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