Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04282 and RBAM_026350

See Amino acid alignment / Visit BSNT_04282 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:44
# Commandline: needle
#    -asequence dna-align/BSNT_04282___ytkK.1.9828.seq
#    -bsequence dna-align/RBAM_026350___fabG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04282___ytkK-RBAM_026350___fabG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04282___ytkK-RBAM_026350___fabG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04282___ytkK
# 2: RBAM_026350___fabG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 769
# Identity:     593/769 (77.1%)
# Similarity:   593/769 (77.1%)
# Gaps:           2/769 ( 0.3%)
# Score: 2249.0
# 
#
#=======================================

BSNT_04282___      1 GTGCGACATGCTTTAATTACTGCCGGTTCGAAGGGTTTAGGCCGCAAAGT     50
                     ||||||||||||.||||.|||||||||.|.|||||.||.|||||.|||||
RBAM_026350__      1 GTGCGACATGCTCTAATCACTGCCGGTACAAAGGGATTGGGCCGAAAAGT     50

BSNT_04282___     51 GACTGAAACGTTGCTTGCAAAGGGGTATTCAGTAACAGTCAATTACAGAC    100
                     ||||||||.|.|.||.|.|||.||.|.|||.||.|||||.||||||||||
RBAM_026350__     51 GACTGAAATGCTTCTGGAAAAAGGCTTTTCTGTCACAGTGAATTACAGAC    100

BSNT_04282___    101 AGGATGAGGAGGCAGTCAGCC-GCCTGAAGGAAGCCTGTCCCGATTGTCT    149
                     |.||.||.||.||.||| ||| |.|||||||..|..|.|||||..||.|.
RBAM_026350__    101 AAGACGAAGAAGCGGTC-GCCTGTCTGAAGGCGGATTATCCCGGGTGCCA    149

BSNT_04282___    150 TGACCGGCTGCAATTTGTAAAAGGTGATGTCACCAAAAAAGAAGATCTGC    199
                     ||||.|..|||||||.||.||.||.|||||.|||...|||||||||||..
RBAM_026350__    150 TGACAGATTGCAATTCGTTAAGGGCGATGTAACCCGGAAAGAAGATCTCA    199

BSNT_04282___    200 TGCGTATTGCAAAGGCTGCCTTAAACCGCTTCGGAAGGATCGACTTTTTG    249
                     ||||.||.||..|.||.|||.|..|.||.||.||||||||.|||.|..||
RBAM_026350__    200 TGCGGATCGCCGATGCAGCCCTTCAGCGGTTTGGAAGGATTGACATACTG    249

BSNT_04282___    250 ATTAACAACGCGGGACCATACATATTTGAACGTAAAAAGTTAGCCGATTA    299
                     ||||||||.||.||.||.||||||||||||||.||||||.|.||||||||
RBAM_026350__    250 ATTAACAATGCCGGGCCGTACATATTTGAACGCAAAAAGCTTGCCGATTA    299

BSNT_04282___    300 TACTGATGATGAATGGTATGGCATGCTGGAAGGAAATTTAAGCGCCGTCT    349
                     ..|.|||||.||||||||||.||||||.|||||.||||||||||||||.|
RBAM_026350__    300 CTCCGATGACGAATGGTATGACATGCTTGAAGGGAATTTAAGCGCCGTTT    349

BSNT_04282___    350 TTCATTTATTCAAAGCGGTTATTCCTGTTATGAGAAAACAGCAATTTGGA    399
                     |.|||.|.||.|||||||||||.||.||.||||||.|.||||..||.||.
RBAM_026350__    350 TCCATCTGTTTAAAGCGGTTATCCCGGTCATGAGACAGCAGCGGTTCGGC    399

BSNT_04282___    400 CGCATCATTACGTACGGATTCCAAGGTGCGGCTCACGCGCCCGGCTGGCT    449
                     ||.||.|||||.|||||.||.|||||.||||..||.||.|||||||||||
RBAM_026350__    400 CGGATTATTACATACGGTTTTCAAGGAGCGGACCATGCCCCCGGCTGGCT    449

BSNT_04282___    450 TCACCGATCGGCATTTGGCGCTGCGAAAGTGGGCTTGGCTTCTTTGACGA    499
                     ||||||.||.||.||.||.||.||.|||||.||.||||||||.||.||||
RBAM_026350__    450 TCACCGTTCCGCTTTCGGAGCGGCTAAAGTCGGATTGGCTTCGTTAACGA    499

BSNT_04282___    500 AGACAATTGCCATTGAAGAAGCCGAATTCGGCATAACCTCCAACATGGTT    549
                     |.||.|||||.|||||||||||.||||..|||||.||..||||.|||||.
RBAM_026350__    500 AAACCATTGCGATTGAAGAAGCTGAATCAGGCATTACGGCCAATATGGTC    549

BSNT_04282___    550 TGCCCGGGAGACATTGTCGGCGACATGAAAGAAGCATCGATAGAGGAAGC    599
                     ||||||||.||.|||||.||.||.|||||||||||.||.|||||||||||
RBAM_026350__    550 TGCCCGGGTGATATTGTAGGAGATATGAAAGAAGCGTCTATAGAGGAAGC    599

BSNT_04282___    600 CAGAATGCGAATCGGCAAAGAAAAAACGCCGATAGGAAGATCCGGTACAG    649
                     .|||..|..|||||||||||||||.||||||||.||.||.|||||.||.|
RBAM_026350__    600 AAGACGGAAAATCGGCAAAGAAAAGACGCCGATCGGCAGGTCCGGAACCG    649

BSNT_04282___    650 GCGAGGATATCGCCCGGATTATCGCTTTCCTGTGTGAGGAGAACTCAGAC    699
                     |.|||||.||.||..|.||.|||||.||..|.|||||.||..|.||.||.
RBAM_026350__    650 GAGAGGACATTGCGAGAATCATCGCCTTTTTATGTGAAGATGATTCCGAT    699

BSNT_04282___    700 CTTGTGACAGGGACTGTCATTGAAGCCACTGGAGGCCTCAATGTCATTAA    749
                     |||||.||.||.||.|||||||||||.||.||.||.||.|||||.|||||
RBAM_026350__    700 CTTGTAACCGGAACGGTCATTGAAGCAACAGGCGGGCTGAATGTGATTAA    749

BSNT_04282___    750 CAAGAATCAAACAACATAA    768
                     ||.|.|||||.|....|||
RBAM_026350__    750 CAGGCATCAATCCCTGTAA    768


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