Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04281 and RBAM_026340
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:43
# Commandline: needle
# -asequence dna-align/BSNT_04281___ytkL.1.9828.seq
# -bsequence dna-align/RBAM_026340___ytkL.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04281___ytkL-RBAM_026340___ytkL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04281___ytkL-RBAM_026340___ytkL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04281___ytkL
# 2: RBAM_026340___ytkL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 690
# Identity: 545/690 (79.0%)
# Similarity: 545/690 (79.0%)
# Gaps: 9/690 ( 1.3%)
# Score: 2129.0
#
#
#=======================================
BSNT_04281___ 1 ATGAAAGTGACATATCACGGACATTCTGT-AATCACAGTGGAAACGAAGG 49
|||||||||||.||||||||||||||||| |.||| ||||||||||||..
RBAM_026340__ 1 ATGAAAGTGACTTATCACGGACATTCTGTCATTCA-AGTGGAAACGAAAA 49
BSNT_04281___ 50 ACCATCATATTATTTTTGATCCGTTTTTAACAGGGAATTCA--TTAACGG 97
.||||.|.||||||||||||||||||.|.||.||.|| || .|.||..
RBAM_026340__ 50 CCCATAACATTATTTTTGATCCGTTTCTGACCGGAAA--CAGTCTGACAA 97
BSNT_04281___ 98 ATATAAAGCCGGAGGATGTAAAAGCGGATGTCATCTTACTAACGCACGGC 147
||.|.||.|||||.||.||.|||||||||||||||.|.||.||.|||||.
RBAM_026340__ 98 ATTTGAAACCGGAAGAAGTGAAAGCGGATGTCATCCTGCTTACTCACGGA 147
BSNT_04281___ 148 CACAATGACCATGTCGGTGATACTGAACAAATCGCCAAGCAAAATAACGC 197
|||||||||||||||||.|||||.||.||.|||||.||.|||||..|.||
RBAM_026340__ 148 CACAATGACCATGTCGGAGATACAGAGCAGATCGCTAAACAAAACGATGC 197
BSNT_04281___ 198 GTTGGTTATAGCCCCGAACGAGCTCGCTGTGTACTTAGGCTGGAAAGGCT 247
|.|.|||||.||.|||||||||||.||.||.||..|.||||..|||||.|
RBAM_026340__ 198 GCTCGTTATTGCGCCGAACGAGCTGGCCGTTTATCTCGGCTTTAAAGGTT 247
BSNT_04281___ 248 TGAATGTTCATCCAATGCATATTGGCGGCTCCCGCCAGTTCGATTTTGGA 297
|.||.||.||.||.||||||||.||.||..|.|||||.||.|||||.||.
RBAM_026340__ 248 TAAAGGTCCACCCGATGCATATCGGAGGGGCGCGCCAATTTGATTTCGGT 297
BSNT_04281___ 298 AAAGTGAAGCTTACACAGGCCTTTCATGGATCAGCCATCACAGATGAAGA 347
||||||||.||.||||||||.||.||.|||||.||..||||.||||||||
RBAM_026340__ 298 AAAGTGAAACTGACACAGGCATTCCACGGATCGGCGGTCACTGATGAAGA 347
BSNT_04281___ 348 AAACAAAACGATCACTTACACAGGCATGCCTGCCGGTATTTTGCTGACTG 397
|||||||||.||.||.|||||.||.|||||.||.||.|||||..||||..
RBAM_026340__ 348 AAACAAAACCATTACGTACACGGGGATGCCGGCTGGGATTTTATTGACGA 397
BSNT_04281___ 398 TAGAAGATAAAACGATTTTCCACGCGGGCGATACGGCTCTTTTCTCTGAT 447
|.||.|..|||||||||||||||||.||.||.|||||.||.|||||||||
RBAM_026340__ 398 TTGACGGCAAAACGATTTTCCACGCCGGGGACACGGCGCTGTTCTCTGAT 447
BSNT_04281___ 448 ATGAAACTCATTGGCGAATTGAATCATATCGACCTTGCTTTCCTGCCGAT 497
||||||||.||.||.|||.|||||||.||.|||||.||.||.||||||||
RBAM_026340__ 448 ATGAAACTGATCGGGGAACTGAATCACATTGACCTGGCGTTTCTGCCGAT 497
BSNT_04281___ 498 TGGCGATAACTTTACGATGGGGCCTGAAGACGCCAAGCTTGCCGCTGAAT 547
.||.||||||||.||.|||||.||||||||.||.||.||.||.|||||.|
RBAM_026340__ 498 CGGTGATAACTTCACCATGGGCCCTGAAGATGCGAAACTCGCGGCTGAGT 547
BSNT_04281___ 548 GGCTGCGCGCAAAACAGGTCGTGCCGGTGCATTACAATACATTCCCGGTC 597
|||||.|.||.|||||||||||.||.||.|||||||||||||||||.|||
RBAM_026340__ 548 GGCTGAGAGCGAAACAGGTCGTTCCCGTCCATTACAATACATTCCCCGTC 597
BSNT_04281___ 598 ATCGAACAAGACCCAGAAGCATTCGCTGACAGCCTGCCGGGCGGAGTCGG 647
||.|||||.|||||.||.||.|||||.||.||.|||||.||.||.|||||
RBAM_026340__ 598 ATTGAACAGGACCCTGACGCTTTCGCCGAAAGTCTGCCCGGAGGCGTCGG 647
BSNT_04281___ 648 CAAAGTCATGTCGGTCGGTGAGACGATCGAGCTT---TAA 684
||||||||||.|||.|||.|||||.||.|||||| |.|
RBAM_026340__ 648 CAAAGTCATGGCGGCCGGCGAGACCATTGAGCTTGCCTGA 687
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