Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04266 and RBAM_026250
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:42
# Commandline: needle
# -asequence dna-align/BSNT_04266___accA.1.9828.seq
# -bsequence dna-align/RBAM_026250___accA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04266___accA-RBAM_026250___accA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04266___accA-RBAM_026250___accA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04266___accA
# 2: RBAM_026250___accA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 980
# Identity: 795/980 (81.1%)
# Similarity: 795/980 (81.1%)
# Gaps: 4/980 ( 0.4%)
# Score: 3211.0
#
#
#=======================================
BSNT_04266___ 1 GTGGCTCCAAGATTAGAATTTGAAAAACCGGTGATTGAACTGCAAACCAA 50
||||||.||||||||||||||||||||||.||||||||||||||.||.||
RBAM_026250__ 1 GTGGCTGCAAGATTAGAATTTGAAAAACCAGTGATTGAACTGCAGACGAA 50
BSNT_04266___ 51 AATCGCCGAACTAAAAAAATTCACCCAAGATTCCGATATGGATCTAAGTG 100
||||||||||||.||||||||||||||||||||.||.||||||.||||.|
RBAM_026250__ 51 AATCGCCGAACTGAAAAAATTCACCCAAGATTCGGAGATGGATTTAAGCG 100
BSNT_04266___ 101 CGGAAATCGAACGGCTCGAAGACCGTCTC-GCTAAGCTTCAGGATGATAT 149
|.|||||||.|.||||.|||||.||.||| || ||||||||||||||.||
RBAM_026250__ 101 CTGAAATCGCAAGGCTTGAAGAACGGCTCAGC-AAGCTTCAGGATGAGAT 149
BSNT_04266___ 150 TTACAAAAATCTGAAGCCATGGGACCGGGTTCAAATCGCGCGTCTGGCGG 199
|||.|||||.||||||||.||||||.|.||.||.|||||.||.||..|.|
RBAM_026250__ 150 TTATAAAAACCTGAAGCCGTGGGACAGAGTGCAGATCGCACGCCTTCCCG 199
BSNT_04266___ 200 ACCGTCCGACAACTCTTGATTATATCGAACACCTGTTTACCGACTTTTTT 249
||||.|||||.||.||||||||.||..||.||||||||||||||||||||
RBAM_026250__ 200 ACCGGCCGACGACGCTTGATTACATTCAATACCTGTTTACCGACTTTTTT 249
BSNT_04266___ 250 GAATGTCACGGAGACAGAGCGTACGGGGACGATGAAGCCATTGTCGGCGG 299
||.||.||||||||||||.|.|||||.||.||||..||.|||||||||||
RBAM_026250__ 250 GAGTGCCACGGAGACAGAACATACGGAGATGATGCGGCGATTGTCGGCGG 299
BSNT_04266___ 300 GATTGCGAAGTTCCACGGCCTCCCTGTAACGGTAATCGGGCATCAGCGCG 349
..|.||.||.|..||||||.|.||.||.||.||.|||||.||||||||||
RBAM_026250__ 300 AGTCGCCAAATATCACGGCATGCCGGTCACCGTTATCGGACATCAGCGCG 349
BSNT_04266___ 350 GCAAAGACACGAAGGAAAACCTAGTCCGCAATTTTGGGATGCCGCATCCA 399
|.|||||||||||.||||||||.|||||||||||.||||||||.||.||.
RBAM_026250__ 350 GAAAAGACACGAAAGAAAACCTTGTCCGCAATTTCGGGATGCCTCACCCT 399
BSNT_04266___ 400 GAAGGCTACAGAAAAGCGCTTCGTCTGATGAAACAGGCTGACAAATTTAA 449
||.||||||.|.||||||||||||||.|||||.|||||.||.||.||.||
RBAM_026250__ 400 GAGGGCTACCGCAAAGCGCTTCGTCTCATGAAGCAGGCGGATAAGTTCAA 449
BSNT_04266___ 450 CAGACCAATTATCTGTTTTATTGATACGAAGGGGGCATACCCCGGACGAG 499
|.|.||.||||||||.||.||.||.||||||||.||.|||||.||...||
RBAM_026250__ 450 CCGCCCGATTATCTGCTTCATCGACACGAAGGGAGCGTACCCGGGTAAAG 499
BSNT_04266___ 500 CAGCTGAAGAAAGAGGACAAAGTGAAGCTATTGCCAAAAACCTGTTTGAG 549
|.||.||.|||.|.||||||||||||||.||.|||||.||||||||.|||
RBAM_026250__ 500 CGGCGGAGGAACGGGGACAAAGTGAAGCCATCGCCAAGAACCTGTTCGAG 549
BSNT_04266___ 550 ATGGCCGGCCTTCGAGTGCCTGTTATCTGCATCGTCATCGGTGAAGGCGG 599
|||||||||||...|||||||||..|.||.|||||||||||.||||||||
RBAM_026250__ 550 ATGGCCGGCCTGACAGTGCCTGTCGTTTGTATCGTCATCGGGGAAGGCGG 599
BSNT_04266___ 600 AAGCGGCGGAGCCCTTGGTCTGGGTGTAGGTAATCACTTGCATATGCTGG 649
.|||||.||.||.||||...|.|||||.||.||.|.|.|||..|||||.|
RBAM_026250__ 600 CAGCGGAGGCGCGCTTGCATTAGGTGTGGGCAACCGCATGCTGATGCTTG 649
BSNT_04266___ 650 AAAACTCTACTTATTCTGTTATTTCTCCGGAAGGTGCCGCGGCACTTTTA 699
|.|||||.||.|||||.|||||||||||.|||||.|||||..|..||||.
RBAM_026250__ 650 AGAACTCGACGTATTCCGTTATTTCTCCTGAAGGAGCCGCATCCATTTTG 699
BSNT_04266___ 700 TGGAAGGACTCCAGTCTTGCTAAAAAAGCAGCAGAAACAATGAAAATCAC 749
|||||.||||||||.|||||.||||||||.||.|||.|.|||||.||.||
RBAM_026250__ 700 TGGAAAGACTCCAGCCTTGCGAAAAAAGCGGCCGAATCCATGAAGATTAC 749
BSNT_04266___ 750 TGCGCCGGATTTAAAAGAATTAGGTATTATAGATCATATGATTAAAGAAG 799
||||||.||||||..|||||||||.|||||.||..|||||||||||||||
RBAM_026250__ 750 TGCGCCCGATTTATTAGAATTAGGAATTATTGACGATATGATTAAAGAAG 799
BSNT_04266___ 800 TAAAAGGCGGAGCGCACCATGATGTGAAGCTGCAGGCAAGCTATATGGAC 849
|.||.||||||||.|||||||||.|.||||.||||||..||||.||.|||
RBAM_026250__ 800 TGAAGGGCGGAGCTCACCATGATATCAAGCAGCAGGCGGGCTACATTGAC 849
BSNT_04266___ 850 GAAACCCTTAAACAATCGTTAAAAACTTTGCTGAAGCTGAGCGAAGAAGA 899
|..|..||||||.||.||||||||.||.|.||..|..|||.||..|||||
RBAM_026250__ 850 GGTATTCTTAAAGAAACGTTAAAATCTCTTCTTCAATTGAACGCCGAAGA 899
BSNT_04266___ 900 ATT-AGTTCAGCAGCGCTATGAAAAATATAAAGCAATTGGCAAAGTCTCG 948
||| |..||| |||||.||||||||||||||||||||.||.|||||.|||
RBAM_026250__ 900 ATTGATCTCA-CAGCGATATGAAAAATATAAAGCAATCGGGAAAGTTTCG 948
BSNT_04266___ 949 GTTGAAGATCAATATATCGGGGTAAACTAA 978
|||||.||||||||||||||||||||||.|
RBAM_026250__ 949 GTTGAGGATCAATATATCGGGGTAAACTGA 978
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