Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04261 and RBAM_026220

See Amino acid alignment / Visit BSNT_04261 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:41
# Commandline: needle
#    -asequence dna-align/BSNT_04261___fxsA.1.9828.seq
#    -bsequence dna-align/RBAM_026220___fxsA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04261___fxsA-RBAM_026220___fxsA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04261___fxsA-RBAM_026220___fxsA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04261___fxsA
# 2: RBAM_026220___fxsA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 405
# Identity:     282/405 (69.6%)
# Similarity:   282/405 (69.6%)
# Gaps:          42/405 (10.4%)
# Score: 998.5
# 
#
#=======================================

BSNT_04261___      1 ATGAGATTATTGTTTTTGCTTTTTATTGTGTTTCCGGCAATAGAAATCGG     50
                     ||||||.|.||.||.||.||.|||||.||||.|||||||||.||||||||
RBAM_026220__      1 ATGAGAGTGTTATTCTTACTGTTTATCGTGTGTCCGGCAATTGAAATCGG     50

BSNT_04261___     51 CATATTCCTATTTTTAGGCAAGCTG-------ATTGGC-----ATTTTAC     88
                     ..|.||.||            ||||       |.||||     |||||.|
RBAM_026220__     51 TTTGTTTCT------------GCTGGCGGGAAAATGGCTCGGTATTTTTC     88

BSNT_04261___     89 CGACAGTTCTATTCATGATTCTGACGGGCATTATCGGCGCAGCAGCT---    135
                     ||||..|.||..||||.|||.||||.|||.|..|.|||||     ||   
RBAM_026220__     89 CGACCTTCCTTCTCATCATTTTGACAGGCGTGTTAGGCGC-----CTTGG    133

BSNT_04261___    136 --GCAAAAAAACAAGGAACCGAAGTGTATTATAAGGTTCAGCGTGATCTT    183
                       |||||||.|||.||||||||.||||||.||..|||...|||.||.||.
RBAM_026220__    134 TGGCAAAAAGACAGGGAACCGATGTGTATCATCGGGTGATGCGCGACCTG    183

BSNT_04261___    184 CAATATGGCAAAATGCCGGGAGAAGCGATTGCTGACGGTCTGTGCATTTT    233
                     ||..|.||||||||||||||.||||||.||..||||||..|.|||.|.||
RBAM_026220__    184 CAGCACGGCAAAATGCCGGGGGAAGCGCTTCTTGACGGAATATGCGTCTT    233

BSNT_04261___    234 CATTGGCGGTCTATTGCTGATGCTTCCGGGCTTTTTATCAGATTTGGCCG    283
                     ..|.||.||.||..|..|||||||||||||.|||.|.||.|||.|.||.|
RBAM_026220__    234 TTTCGGAGGCCTGCTTTTGATGCTTCCGGGTTTTCTGTCCGATATTGCAG    283

BSNT_04261___    284 GCGCCTGTCTTCTTATCCCGTTTACCCG----CGGCTGGTGTAAGCCGAT    329
                     |.|||||||||||.||.|||||.||.||    ||..||    ||||||.|
RBAM_026220__    284 GGGCCTGTCTTCTGATTCCGTTCACTCGGAACCGCATG----AAGCCGCT    329

BSNT_04261___    330 TCTGTTCAAATGGCTGAGAGGTATGTCGAAGAATAAGCGGATCATCATCA    379
                     |.|||||||||||||||||||.|||||.||.||.|||||||||||.||||
RBAM_026220__    330 TTTGTTCAAATGGCTGAGAGGAATGTCAAAAAACAAGCGGATCATTATCA    379

BSNT_04261___    380 AATAA    384
                     |||||
RBAM_026220__    380 AATAA    384


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