Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04256 and RBAM_026200

See Amino acid alignment / Visit BSNT_04256 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:41
# Commandline: needle
#    -asequence dna-align/BSNT_04256___ytwI.1.9828.seq
#    -bsequence dna-align/RBAM_026200___ytwI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04256___ytwI-RBAM_026200___ytwI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04256___ytwI-RBAM_026200___ytwI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04256___ytwI
# 2: RBAM_026200___ytwI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 472
# Identity:     355/472 (75.2%)
# Similarity:   355/472 (75.2%)
# Gaps:          14/472 ( 3.0%)
# Score: 1318.0
# 
#
#=======================================

BSNT_04256___      1 GTGTTTACACAAGCGAATTTATTTTTAATTTTACTCTTGGCTATCGCACT     50
                     .||||||||||.|||||||||||||||.|.|||.|..||||.||||||.|
RBAM_026200__      1 ATGTTTACACAGGCGAATTTATTTTTACTATTATTGCTGGCCATCGCATT     50

BSNT_04256___     51 TATCGCAAAAAACCAATCATTGCTCTTTGCTGTATCCG------TCCTTT     94
                     ..|.||.|||||.||.||||||||.|||||.||   ||      ||.||.
RBAM_026200__     51 GGTAGCCAAAAATCAGTCATTGCTTTTTGCCGT---CGGCTTTCTCATTG     97

BSNT_04256___     95 TGATCATCAAAATC-CTAGGGCTTGATCAGAAATTATTTCCGACCATCCA    143
                     ||||    ||||.| .|.||.||||||||||||.||||||||...||.||
RBAM_026200__     98 TGAT----AAAAGCTGTCGGTCTTGATCAGAAACTATTTCCGGTTATTCA    143

BSNT_04256___    144 GTCAAAAGGCATTAACTGGGGTGTGACCATTATTACCATCGCCGTTCTTG    193
                     .|||||||||||.||||||||.||.|||.|.|||||.|||||||||.|.|
RBAM_026200__    144 ATCAAAAGGCATCAACTGGGGAGTCACCGTCATTACAATCGCCGTTTTAG    193

BSNT_04256___    194 TCCCGATTGCCACGGGAGAAATCGGATTTAAGCAGCTTGGAGAAGCAATG    243
                     |.|||||||||||.||.||.|||||.|||||.|||||.||||||||.|||
RBAM_026200__    194 TGCCGATTGCCACAGGTGATATCGGTTTTAAACAGCTCGGAGAAGCGATG    243

BSNT_04256___    244 CGGTCTTCCTACGCATGGATCGCCCTTGGAGCGGGGATCGCAGTGGCGCT    293
                     ...||.|..||.||.||||||||.||.||.||.||||||||.||.||..|
RBAM_026200__    244 AAATCATATTATGCGTGGATCGCTCTCGGTGCCGGGATCGCGGTTGCCTT    293

BSNT_04256___    294 GATTGCAAAAAACGGCCTGGCCCTGCTTGAAAATGATCCGCATATTACAA    343
                     .||.||.||||||||.||..||.|..|.|||||.||.||.||||||||||
RBAM_026200__    294 AATCGCCAAAAACGGTCTCACCTTATTGGAAAACGACCCTCATATTACAA    343

BSNT_04256___    344 CTGCTCTCGTGATCGGGACCATTCTTGCGGTTGCGCTTTTTGGAGGAGTT    393
                     |.||.||.||.|||||.||.||.|||||.||.||||||||.|||||.||.
RBAM_026200__    344 CGGCGCTGGTCATCGGCACGATACTTGCCGTCGCGCTTTTCGGAGGCGTC    393

BSNT_04256___    394 GCGGTGGGACCGCTGATCGGAGCGGGGATTGCTTATTTAGCCATGCAGAT    443
                     ||.||.||.|||.|.|||||.||.||.||.||.||.||.||||||||.||
RBAM_026200__    394 GCCGTCGGCCCGTTAATCGGCGCCGGAATCGCCTACTTGGCCATGCAAAT    443

BSNT_04256___    444 CGTAAAACTGTTCACTTCATAA    465
                     |||.|||.|.||||||||.|||
RBAM_026200__    444 CGTTAAAATATTCACTTCGTAA    465


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