Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04254 and RBAM_026180
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:41
# Commandline: needle
# -asequence dna-align/BSNT_04254___citZ.1.9828.seq
# -bsequence dna-align/RBAM_026180___citZ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04254___citZ-RBAM_026180___citZ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04254___citZ-RBAM_026180___citZ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04254___citZ
# 2: RBAM_026180___citZ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1121
# Identity: 924/1121 (82.4%)
# Similarity: 924/1121 (82.4%)
# Gaps: 4/1121 ( 0.4%)
# Score: 3808.0
#
#
#=======================================
BSNT_04254___ 1 ATGACAGCGACACGCGGTCTTGAAGGGGTTGTAGCAACAACATCATCTGT 50
||||||||.|||||||||||||||||||||||||||||||||||||||||
RBAM_026180__ 1 ATGACAGCAACACGCGGTCTTGAAGGGGTTGTAGCAACAACATCATCTGT 50
BSNT_04254___ 51 TAGTTCTATTATTGATGATACCCTTACATATGTGGGGTATGATATCGATG 100
.||.||||||||.||.|||||||||||||||||.|||||.|||||.||.|
RBAM_026180__ 51 AAGCTCTATTATCGACGATACCCTTACATATGTAGGGTACGATATTGACG 100
BSNT_04254___ 101 ATTTGACAGAGAATGCAAGTTTTGAAGAAATCATCTACTTGCTTTGGCAT 150
|.||||||||||||||||||||||||||||||||.||.|||||.||||||
RBAM_026180__ 101 ACTTGACAGAGAATGCAAGTTTTGAAGAAATCATTTATTTGCTGTGGCAT 150
BSNT_04254___ 151 CTAAGGCTGCCAAACAAAAAAGAGCTTGAAGAGTTAAAGCAGCAGCTTGC 200
||..|.|||||.||.||||..||.||||..||..|.||..|.||||||||
RBAM_026180__ 151 CTGCGCCTGCCGAATAAAACGGAACTTGCTGAACTGAAAAAACAGCTTGC 200
BSNT_04254___ 201 AAAGGAAGCTGCCGTTCCGCAAGAAATTATTGAGCACTTCAAATCTTATT 250
.||.||||||||||||||.||||||||.|||||||||||||||||.|||.
RBAM_026180__ 201 GAAAGAAGCTGCCGTTCCACAAGAAATCATTGAGCACTTCAAATCCTATC 250
BSNT_04254___ 251 CCCTCGAAAATGTTCATCCCATGGCTGCTCTTCGGACAGCAATTTCATTA 300
|||||.|.||.||.|||||.||||||||.||.|||||.||.|||||||||
RBAM_026180__ 251 CCCTCAATAACGTACATCCAATGGCTGCGCTCCGGACGGCGATTTCATTA 300
BSNT_04254___ 301 CTAGGCCTGCTTGACAGCGAGGCTGATACCATGAACCCGGAAGCCAACTA 350
||.||.|||..||||||.||.||.|||...|||||.||||||||.|||||
RBAM_026180__ 301 CTCGGTCTGACTGACAGTGAAGCCGATGTTATGAATCCGGAAGCGAACTA 350
BSNT_04254___ 351 CAGAAAGGCGATCCGCCTTCAGGCAAAGGTGCCTGGCCTGGTTGCAGCGT 400
||||||.||.|||||.||.|||||.||.|||||.|||.|.||.||.||.|
RBAM_026180__ 351 CAGAAAAGCCATCCGTCTGCAGGCGAAAGTGCCGGGCATTGTCGCCGCTT 400
BSNT_04254___ 401 TTTCCAGAATTCGCAGGGGTCTTGAGCCTGTTGAACCGAGAGAAGATTAC 450
|.||.|||||.||||..||.|||||.|||||||||||||..|||||.|||
RBAM_026180__ 401 TCTCAAGAATCCGCAAAGGACTTGATCCTGTTGAACCGAAGGAAGAGTAC 450
BSNT_04254___ 451 GGTATTGCGGAGAATTTTCTTTACACATTAAACGGTGAAGAGCCTTCACC 500
||.||.||||||||.||.||||||||.||||||||||||||||||||.||
RBAM_026180__ 451 GGAATCGCGGAGAACTTCCTTTACACCTTAAACGGTGAAGAGCCTTCTCC 500
BSNT_04254___ 501 AATTGAGGTTGAAGCCTTCAACAAAGCATTGATTTTACATGCTGACCATG 550
.||.||.||.|||||.||.||||||||..|.|||.|.|||||.||.||||
RBAM_026180__ 501 GATCGAAGTGGAAGCGTTTAACAAAGCGCTCATTCTTCATGCGGATCATG 550
BSNT_04254___ 551 AGTTGAACGCGTCAACGTTCACAGCGAGGGTCTGCGTCGCAACACTT-TC 599
||.|||||||.|||||.||.||.|||||.||.||.|||||.|| ||| ||
RBAM_026180__ 551 AGCTGAACGCATCAACATTTACGGCGAGAGTATGTGTCGCCAC-CTTATC 599
BSNT_04254___ 600 TGACATCTATTCAGGCATTACTGCAGCAATCGGCGCGCTGAAAGGGCCTC 649
|||.||.||.||||||||.|||||.||.||||||||..|.|||||.||.|
RBAM_026180__ 600 TGATATTTACTCAGGCATCACTGCCGCCATCGGCGCTTTAAAAGGACCGC 649
BSNT_04254___ 650 TTCACGGAGGAGCGAATGAAGGCGTTATGAAAATGCTGACAGAAATCGGT 699
|||||||.|||||.|||||||.|||.|||||||||||||||||||||||.
RBAM_026180__ 650 TTCACGGCGGAGCCAATGAAGCCGTCATGAAAATGCTGACAGAAATCGGC 699
BSNT_04254___ 700 GAAGTGGAAAACGCTGAGCCGTACATCCGC-GCTAAACTTGAAAAGAAAG 748
|||||||||||.||.|||||.||.|||||| || |||.|.||.||.||.|
RBAM_026180__ 700 GAAGTGGAAAATGCCGAGCCTTATATCCGCAGC-AAAATGGAGAAAAAGG 748
BSNT_04254___ 749 AAAAAATCATGGGATTCGGCCACCGTGTGTATAAGCATGGTGATCCGCGC 798
|||||.|.|||||.|||||.||||||||||||||||||||.||.||||||
RBAM_026180__ 749 AAAAAGTAATGGGCTTCGGACACCGTGTGTATAAGCATGGAGACCCGCGC 798
BSNT_04254___ 799 GCGAAGCATCTGAAAGAAATGAGCAAGCGCCTGACCAACCTGACAGGCGA 848
||.||.||..|.||||||||||||||.||||||||.||.|||||.||.||
RBAM_026180__ 799 GCCAAACACTTAAAAGAAATGAGCAAACGCCTGACGAATCTGACGGGTGA 848
BSNT_04254___ 849 AAGCAAATGGTATGAGATGTCGATTCGTATAGAAGACATCGTCACATCAG 898
||||||||||||.||||||||.||.|||.|.|||||.|||||.||.||.|
RBAM_026180__ 849 AAGCAAATGGTACGAGATGTCAATCCGTGTCGAAGAAATCGTAACGTCGG 898
BSNT_04254___ 899 AGAAAAAGCTTCCGCCTAACGTTGATTTCTATTCGGCTTCTGTATATCAC 948
|||||||.||.|||||||||||||||||||||||.||.||||||||.|||
RBAM_026180__ 899 AGAAAAAACTCCCGCCTAACGTTGATTTCTATTCCGCATCTGTATACCAC 948
BSNT_04254___ 949 AGCCTCGGTATTGACCATGATTTGTTTACACCGATTTTTGCTGTAAGCAG 998
||.|||||.|||||.||.|||.||||.||.|||||.|||||.||.|||||
RBAM_026180__ 949 AGTCTCGGCATTGATCACGATCTGTTCACGCCGATCTTTGCGGTCAGCAG 998
BSNT_04254___ 999 AATGTCCGGCTGGCTCGCTCATATTCTTGAGCAGTATGACAACAACCGTC 1048
||||||.||.|||.||||.|||||||||||.|||||.||.||||||||.|
RBAM_026180__ 999 AATGTCAGGATGGATCGCCCATATTCTTGAACAGTACGATAACAACCGCC 1048
BSNT_04254___ 1049 TGATCCGCCCGCGGGCAGATTACACAGGCCCTGACAAACAAAAATTCGTT 1098
|.|||||||||||.||.||||||||.||.||.||.||.||.|..||.|||
RBAM_026180__ 1049 TCATCCGCCCGCGCGCTGATTACACGGGTCCGGATAAGCAGACTTTTGTT 1098
BSNT_04254___ 1099 CCGATTGAAGAAAGAGCCTAA 1119
||||||||.||||||||||.|
RBAM_026180__ 1099 CCGATTGATGAAAGAGCCTGA 1119
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