Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04231 and RBAM_026020
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:39
# Commandline: needle
# -asequence dna-align/BSNT_04231___dnaI.1.9828.seq
# -bsequence dna-align/RBAM_026020___dnaI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04231___dnaI-RBAM_026020___dnaI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04231___dnaI-RBAM_026020___dnaI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04231___dnaI
# 2: RBAM_026020___dnaI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 946
# Identity: 741/946 (78.3%)
# Similarity: 741/946 (78.3%)
# Gaps: 20/946 ( 2.1%)
# Score: 2898.0
#
#
#=======================================
BSNT_04231___ 1 ATGGAACCAATCGGCCGTTCTCTGCAGGGCGTAACCGGCAGGCCGGATTT 50
||||||||.|||.||||.||..|..|.|||||.||....||.||.||.||
RBAM_026020__ 1 ATGGAACCGATCAGCCGATCCTTAGAAGGCGTGACGAAAAGACCTGACTT 50
BSNT_04231___ 51 CCAAAAACGTCTTGAACAAATGAAGGAAAAAGTCATGAAAGATCAAGATG 100
.||||||||.||.||||.||||.||.|..||||||||...||..||||.|
RBAM_026020__ 51 TCAAAAACGCCTGGAACGAATGCAGCAGCAAGTCATGGCCGACGAAGACG 100
BSNT_04231___ 101 TTCAAGCATTTTTGAAGGAAAACGAAGAAGTGATTGACCAAAAAATGATC 150
|.||.||.||||||||||||.|..||||.||.||..|.||||..|||||.
RBAM_026020__ 101 TCCAGGCTTTTTTGAAGGAACAGAAAGATGTAATCAATCAAAGCATGATT 150
BSNT_04231___ 151 GAAAAGA-GCTTAAATAAGCTTTATGAATATATCG---AACAAAGCAAGA 196
| |.||| |.||||||||.||.||.|||| ||| |.||||||||..
RBAM_026020__ 151 G-ACAGAGGGTTAAATAAACTGTACGAAT---TCGTTCAGCAAAGCAAAC 196
BSNT_04231___ 197 ATTGCTCCTATTGTTCGGAAGATGAAAACTGC------AACAATTTGTTG 240
|.|||.|||..||||||.||| ||.|| ||||...||.|.
RBAM_026020__ 197 AGTGCGCCTTCTGTTCGAAAG------ACAGCCGGACGAACAGCCTGCTT 240
BSNT_04231___ 241 GAGGGCTACCATCCGAAGCTTGTTGTCAATGGGAGGTCTATTGATATCGA 290
||.|||||.||||||||||||||..||||.|||.|.||.||.|||||.||
RBAM_026020__ 241 GAAGGCTATCATCCGAAGCTTGTGATCAACGGGCGTTCCATCGATATTGA 290
BSNT_04231___ 291 GTATTACGAATGTCCAGTCAAACGGAAGCTCGACCAGCAGAAGAAACAAA 340
.||||||||||||||.|..||..|.||||||||||..|||||.|..||||
RBAM_026020__ 291 ATATTACGAATGTCCGGAAAAGAGAAAGCTCGACCGCCAGAAAAGGCAAA 340
BSNT_04231___ 341 AGTCTCTTATGAAAAGCATGTATATCCAGCAGGATCTTCTCGGAGCGACG 390
||||.||.|||||.|||||||||||||||||||||||||||||.|||||.
RBAM_026020__ 341 AGTCCCTGATGAAGAGCATGTATATCCAGCAGGATCTTCTCGGCGCGACC 390
BSNT_04231___ 391 TTCCAGCAAGTTGATATCAGTGACCCGAGCAGGCTCGCGATGTTTCAGCA 440
||.|||||..|.||.||.|..||.||||||||..|||..||.||.|||||
RBAM_026020__ 391 TTTCAGCAGATCGACATTACCGATCCGAGCAGAGTCGGCATTTTCCAGCA 440
BSNT_04231___ 441 TGTTACAGACTTCCTGAAAAGCTATAATGAGACGGGAAAAGGGAAAGGAT 490
|||.||.||.||.|||||.|||||||||||.|||||||||||.|||||..
RBAM_026020__ 441 TGTGACGGATTTTCTGAAGAGCTATAATGAAACGGGAAAAGGCAAAGGGC 490
BSNT_04231___ 491 TATATTTATACGGGAAATTCGGGGTAGGAAAAACGTTTATGCTCGCTGCG 540
|.|||.|.|||||.||||||||..|.|||||.||.|||||..|.||.||.
RBAM_026020__ 491 TGTATCTGTACGGAAAATTCGGAATCGGAAAGACATTTATTTTAGCCGCC 540
BSNT_04231___ 541 ATTGCCAATGAGCTGGCGGAAAAAGAGTATTCCTCCATGATTGTCTATGT 590
|||||.||.||.||||||||||||||||||||.||.|||||.||.|||||
RBAM_026020__ 541 ATTGCTAACGAACTGGCGGAAAAAGAGTATTCATCAATGATCGTATATGT 590
BSNT_04231___ 591 GCCTGAATTTGTGAGAGAGCTTAAGAATTCGCTGCAAGACCAGACATTGG 640
.||.||||||||.||||||||.||.||.|||||.||.||.|||.|.||||
RBAM_026020__ 591 TCCCGAATTTGTCAGAGAGCTGAAAAACTCGCTCCAGGATCAGTCGTTGG 640
BSNT_04231___ 641 AAGAGAAGCTCAATATGGTAAAGACCACACCCGTATTGATGCTTGATGAC 690
|.|.|||.||.||||||||.||.||.||.||||||.||||||||||||||
RBAM_026020__ 641 AGGCGAAACTGAATATGGTGAAAACGACGCCCGTACTGATGCTTGATGAC 690
BSNT_04231___ 691 ATCGGAGCAGAATCAATGACAAGCTGGGTAAGGGATGAAGTCATCGGAAC 740
||||||||.||||||||||||||||||||.||.||||||||||||||.||
RBAM_026020__ 691 ATCGGAGCGGAATCAATGACAAGCTGGGTCAGAGATGAAGTCATCGGCAC 740
BSNT_04231___ 741 GGTGCTTCAACACAGAATGTCCCAGCAGCTGCCTACTTTCTTTTCTTCTA 790
.||||||||.|||||||||..|||||||||.||.||||||||.||.||||
RBAM_026020__ 741 CGTGCTTCAGCACAGAATGAGCCAGCAGCTTCCCACTTTCTTCTCGTCTA 790
BSNT_04231___ 791 ATTTCTCACCTGACGAGCTGAAGCATCATTTTACGTATTCGCAGAGGGGA 840
||||.|||||.|||||||||||||||||||||||||||||.|||.|||||
RBAM_026020__ 791 ATTTTTCACCAGACGAGCTGAAGCATCATTTTACGTATTCACAGCGGGGA 840
BSNT_04231___ 841 GAAAAAGAAGAAGTAAAAGCTGCAAGATTAATGGAGCGGATATTATATTT 890
|||||.||||||||||||||.||||||.|.|||||||||||.||||||||
RBAM_026020__ 841 GAAAAGGAAGAAGTAAAAGCGGCAAGACTGATGGAGCGGATTTTATATTT 890
BSNT_04231___ 891 GGCTGCTCCGATCCGCCTTGACGGAGAAAACCGCCGCCATCCATAA 936
||||.|.||..||||.||||||||.|||||||||||||.|.|||.|
RBAM_026020__ 891 GGCTTCGCCCGTCCGTCTTGACGGGGAAAACCGCCGCCGTTCATGA 936
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