Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04214 and RBAM_025930

See Amino acid alignment / Visit BSNT_04214 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:38
# Commandline: needle
#    -asequence dna-align/BSNT_04214___infC.1.9828.seq
#    -bsequence dna-align/RBAM_025930___infC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04214___infC-RBAM_025930___infC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04214___infC-RBAM_025930___infC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04214___infC
# 2: RBAM_025930___infC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 504
# Identity:     480/504 (95.2%)
# Similarity:   480/504 (95.2%)
# Gaps:           0/504 ( 0.0%)
# Score: 2304.0
# 
#
#=======================================

BSNT_04214___      1 TTGGTTAATGAGGGTATCCGTGCACGTGAGGTCCGTTTAATCGGACAAAA     50
                     |||||||||||||||||||||||||||||.||.|||.|.|||||||||||
RBAM_025930__      1 TTGGTTAATGAGGGTATCCGTGCACGTGAAGTTCGTCTGATCGGACAAAA     50

BSNT_04214___     51 TGGCGACCAGCTTGGAATCAAGTCCCGTCAGGAAGCACTTGAAATCGCCG    100
                     ||||||.|||||.||.||||||||||||||||||||||||||||||||||
RBAM_025930__     51 TGGCGATCAGCTCGGCATCAAGTCCCGTCAGGAAGCACTTGAAATCGCCG    100

BSNT_04214___    101 GCCGCGCAAATCTTGACCTTGTGTTAGTTGCAGCGAATGCAAAACCGCCT    150
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
RBAM_025930__    101 GCCGCGCAAATCTTGACCTTGTGTTAGTTGCAGCAAATGCAAAACCGCCT    150

BSNT_04214___    151 GTCTGCCGAATCATGGACTACGGTAAGTTCCGATTTGAGCAGCAGAAAAA    200
                     ||||||||.|||||||||||||||||||||.||||.||||||||||||||
RBAM_025930__    151 GTCTGCCGCATCATGGACTACGGTAAGTTCAGATTCGAGCAGCAGAAAAA    200

BSNT_04214___    201 GGAAAAAGAAGCACGCAAGAATCAAAAAATCATTAACTTAAAAGAAGTTC    250
                     |||.||||||||||||||.||||||||||||||||||||||||||||||.
RBAM_025930__    201 GGACAAAGAAGCACGCAAAAATCAAAAAATCATTAACTTAAAAGAAGTTA    250

BSNT_04214___    251 GGTTAAGTCCGACAATCGATGAGCATGACTTTAACACGAAATTGCGCAAT    300
                     |.|||||||||||.||||||||||||||||||||||||||||||||||||
RBAM_025930__    251 GATTAAGTCCGACGATCGATGAGCATGACTTTAACACGAAATTGCGCAAT    300

BSNT_04214___    301 GCGATTAAATTCCTTGAAAAAGGCGATAAAGTGAAAGCTTCTATCCGCTT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_025930__    301 GCGATTAAATTCCTTGAAAAAGGCGATAAAGTGAAAGCTTCTATCCGCTT    350

BSNT_04214___    351 TAAAGGACGCGCAATCACTCATAAAGAAATCGGTCAGCGTGTATTAGACC    400
                     ||||||.||||||||||||||||||||||||||.|||||.|||||.||||
RBAM_025930__    351 TAAAGGGCGCGCAATCACTCATAAAGAAATCGGCCAGCGCGTATTGGACC    400

BSNT_04214___    401 GTTTCTCCGAAGCATGTGCTGAGGTTGCGACAGTCGAAACAAAACCAAAA    450
                     |||||||.|||||||||||.||.|||||||||||||||||||||||||||
RBAM_025930__    401 GTTTCTCTGAAGCATGTGCGGAAGTTGCGACAGTCGAAACAAAACCAAAA    450

BSNT_04214___    451 ATGGACGGCCGCAGCATGTTCTTAATGCTCGCACCGAAAAACGAAAAGCA    500
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
RBAM_025930__    451 ATGGACGGCCGCAGCATGTTCTTAATGCTCGCGCCGAAAAACGAAAAGCA    500

BSNT_04214___    501 ATAA    504
                     ||||
RBAM_025930__    501 ATAA    504


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