Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04213 and RBAM_025920
See
Amino acid alignment /
Visit
BSNT_04213 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:37
# Commandline: needle
# -asequence dna-align/BSNT_04213___rpmI.1.9828.seq
# -bsequence dna-align/RBAM_025920___rpmI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04213___rpmI-RBAM_025920___rpmI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04213___rpmI-RBAM_025920___rpmI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04213___rpmI
# 2: RBAM_025920___rpmI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 201
# Identity: 191/201 (95.0%)
# Similarity: 191/201 (95.0%)
# Gaps: 0/201 ( 0.0%)
# Score: 915.0
#
#
#=======================================
BSNT_04213___ 1 ATGCCAAAAATGAAAACTCACCGCGGATCTGCTAAACGTTTTAAAAAGAC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_025920__ 1 ATGCCAAAAATGAAAACTCACCGCGGATCTGCTAAACGTTTTAAAAAGAC 50
BSNT_04213___ 51 AGGTTCTGGGAAGTTAAAACGTTCTCACGCGTACACAAGTCACTTATTCG 100
|||||||||||||||||||||||||||.||.||.||||||||||||||||
RBAM_025920__ 51 AGGTTCTGGGAAGTTAAAACGTTCTCATGCATATACAAGTCACTTATTCG 100
BSNT_04213___ 101 CCAACAAATCTCAAAAGCAAAAGCGTAAGCTTCGCAAGAGTGCTGTTGTA 150
||||||||||.|||||||||||||||||||||||||||.|||||.||||.
RBAM_025920__ 101 CCAACAAATCCCAAAAGCAAAAGCGTAAGCTTCGCAAGGGTGCTATTGTG 150
BSNT_04213___ 151 AGCGCAGGAGACTTCAAACGTATCAAACAAATGCTTGCTAACATCAAGTA 200
||||||||||||||||||||.|||||||||..||||||||||||||||||
RBAM_025920__ 151 AGCGCAGGAGACTTCAAACGCATCAAACAACAGCTTGCTAACATCAAGTA 200
BSNT_04213___ 201 A 201
|
RBAM_025920__ 201 A 201
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.