Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04211 and RBAM_025910
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:37
# Commandline: needle
# -asequence dna-align/BSNT_04211___rplT.1.9828.seq
# -bsequence dna-align/RBAM_025910___rplT.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04211___rplT-RBAM_025910___rplT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04211___rplT-RBAM_025910___rplT.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04211___rplT
# 2: RBAM_025910___rplT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 360
# Identity: 339/360 (94.2%)
# Similarity: 339/360 (94.2%)
# Gaps: 0/360 ( 0.0%)
# Score: 1611.0
#
#
#=======================================
BSNT_04211___ 1 ATGCCAAGAGTAAAAGGCGGAACTGTTACACGTAAGCGTCGTAAAAAGGT 50
||||||||||||||||||||||||||..|.|||.||||||||||||||||
RBAM_025910__ 1 ATGCCAAGAGTAAAAGGCGGAACTGTGTCGCGTCAGCGTCGTAAAAAGGT 50
BSNT_04211___ 51 TCTTAAATTAGCAAAAGGTTATTTCGGTTCAAAACATACATTATACAAAG 100
||||||||||||||||||||||||||||||||||||||.|||||||||||
RBAM_025910__ 51 TCTTAAATTAGCAAAAGGTTATTTCGGTTCAAAACATAGATTATACAAAG 100
BSNT_04211___ 101 TAGCTAACCAGCAGGTCATGAAATCTGGAAACTATGCTTTCCGTGACCGT 150
||||.||||||||||||||||||||.|||||||||||.|||||||||||.
RBAM_025910__ 101 TAGCAAACCAGCAGGTCATGAAATCAGGAAACTATGCATTCCGTGACCGC 150
BSNT_04211___ 151 CGTCAGAAAAAACGTGATTTCCGTAAACTTTGGATCACTCGTATCAACGC 200
||||||||||||||||||||||||||.|||||||||||||||||||||||
RBAM_025910__ 151 CGTCAGAAAAAACGTGATTTCCGTAAGCTTTGGATCACTCGTATCAACGC 200
BSNT_04211___ 201 AGCTGCTCGCATGAACGGCCTTTCTTACAGCCGTTTAATGCACGGTCTTA 250
.|||||.||.||||||||.|||||||||||||||||||||||||||||||
RBAM_025910__ 201 TGCTGCACGTATGAACGGTCTTTCTTACAGCCGTTTAATGCACGGTCTTA 250
BSNT_04211___ 251 AGCTTTCTGGTATCGAAGTAAACCGTAAAATGCTTGCTGATCTTGCTGTA 300
|||||||.||.||||||||||||||.||||||||||||||||||||||||
RBAM_025910__ 251 AGCTTTCAGGCATCGAAGTAAACCGCAAAATGCTTGCTGATCTTGCTGTA 300
BSNT_04211___ 301 AACGATCTTACTGCATTCAACCAGCTTGCTGATGCTGCTAAAGCTCAATT 350
||||||||||||||.|||||.||||||||||||||||||||||||||.||
RBAM_025910__ 301 AACGATCTTACTGCTTTCAATCAGCTTGCTGATGCTGCTAAAGCTCAGTT 350
BSNT_04211___ 351 AAACAAGTAA 360
|.||||||||
RBAM_025910__ 351 AGACAAGTAA 360
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