Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04200 and RBAM_025840
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:36
# Commandline: needle
# -asequence dna-align/BSNT_04200___araD.1.9828.seq
# -bsequence dna-align/RBAM_025840___araD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04200___araD-RBAM_025840___araD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04200___araD-RBAM_025840___araD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04200___araD
# 2: RBAM_025840___araD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 696
# Identity: 526/696 (75.6%)
# Similarity: 526/696 (75.6%)
# Gaps: 12/696 ( 1.7%)
# Score: 1973.0
#
#
#=======================================
BSNT_04200___ 1 ATGCTTGAAACATTAAAAAAAGAAGTGCTGGCTGCCAACCTGAAGCTTCA 50
|||||||||.|.||||||.||||||||||.||||||||.|||||||||.|
RBAM_025840__ 1 ATGCTTGAAGCGTTAAAAGAAGAAGTGCTCGCTGCCAATCTGAAGCTTGA 50
BSNT_04200___ 51 AGAGCATCAGCTGGTAACCTTTACGTGGGGAAATGTCAGCGGCATTGACC 100
.||.|||.|.||.||.||.|||||.|||||.||||||||||||||.|||.
RBAM_025840__ 51 GGAACATAACCTTGTCACGTTTACATGGGGGAATGTCAGCGGCATCGACA 100
BSNT_04200___ 101 GTGAAAAAGAAAGAATTGTCATCAAACCTAGCGGAGTCGAATACAGCGAC 150
|.||.|..|..|||||.|||||.|||||.|||||.|||||.|||||.||.
RBAM_025840__ 101 GAGAGAGCGGGAGAATCGTCATTAAACCGAGCGGTGTCGATTACAGTGAG 150
BSNT_04200___ 151 CTTACAGCAGATGACTTGGTTGTTTTGAACCTTGATGGAGAGGTCGTCGA 200
||.||.||.||..|..||||.||..||||....||.|||||..|..||||
RBAM_025840__ 151 CTGACCGCTGACAAACTGGTCGTCCTGAATGAGGACGGAGACATTCTCGA 200
BSNT_04200___ 201 AGGCTCGCTTAAGCCTTCTTCAGATACACCTACCCATGTTTATCTATATA 250
|||||||||.||.||.|||||.||.||.||.||||||.|||||||.||||
RBAM_025840__ 201 AGGCTCGCTGAAACCGTCTTCTGACACGCCGACCCATCTTTATCTGTATA 250
BSNT_04200___ 251 AAGCCTTTCCGAATATCGGGGGAATTGTCCATACCCATTCCCAATGGGCG 300
||||.||||||..||||||.|||||.||.|||||.||.||||..||||||
RBAM_025840__ 251 AAGCGTTTCCGGCTATCGGCGGAATCGTTCATACGCACTCCCGCTGGGCG 300
BSNT_04200___ 301 ACAAGCTGGGCGCAATCGGGCAGAGACATCCCTCCGTTAGGCACGACCCA 350
||.|||||||||||.||.||.||||||||.||..|..|.||.|||||.||
RBAM_025840__ 301 ACGAGCTGGGCGCAGTCCGGAAGAGACATACCCGCTCTCGGAACGACTCA 350
BSNT_04200___ 351 TGCTGATTATTTTGACAGTGCGATTCCATGTACTCGAGAAATGTATGATG 400
.||.|||||.|||||.||.||..|.||.||.||..|.|||||||||||.|
RBAM_025840__ 351 CGCGGATTACTTTGAAAGCGCTGTACCCTGCACGAGGGAAATGTATGAAG 400
BSNT_04200___ 401 AAGAAATCATTCATGACTACGAACTGAATACAGGAAAAGTCATAGCGGAA 450
|||||||..|..|.||.||||||....|||||||.|||||||||||.|||
RBAM_025840__ 401 AAGAAATTGTGAAAGATTACGAATATCATACAGGCAAAGTCATAGCCGAA 450
BSNT_04200___ 451 ACCTTTCAGCATCATAAC------TACGAACAGGTGCCGGGTGTGCTCGT 494
||.|| |||.||| ||.|||||....||||||||.|||||
RBAM_025840__ 451 ACTTT------TCAAAACGAACCGTATGAACAAAATCCGGGTGTCCTCGT 494
BSNT_04200___ 495 GAATAATCACGGACCGTTCTGCTGGGGCACTGACGCCTTAAATGCCATTC 544
..|.|..|||||.||||||||||||||.||.|||||..|.||||||.|.|
RBAM_025840__ 495 CCACAGCCACGGCCCGTTCTGCTGGGGAACGGACGCGCTGAATGCCCTGC 544
BSNT_04200___ 545 ATAACGCAGTTGTATTAGAAACGGTTGCCGAAATGGCCTATCACTCTATT 594
|||||||.|||||..|.||||||||.||.|||||||||||.||.||..||
RBAM_025840__ 545 ATAACGCCGTTGTGCTCGAAACGGTAGCGGAAATGGCCTACCATTCGCTT 594
BSNT_04200___ 595 ATGCTGAACAAGGATGTAACCCCAATCAATACAGTCCTGCATGAAAAGCA 644
|||||||||||..|..|.|..||.|||.|.|.|||.||||||||.|||||
RBAM_025840__ 595 ATGCTGAACAAACAGCTCAGTCCGATCGACAGAGTGCTGCATGATAAGCA 644
BSNT_04200___ 645 TTTTTATCGAAAACACGGAGCAAATGCGTATTATGGCCAGTCATGA 690
||||||..||||||||||.||.|||||.|||||||||||..|.|||
RBAM_025840__ 645 TTTTTACAGAAAACACGGGGCGAATGCTTATTATGGCCAAACTTGA 690
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