Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04199 and RBAM_025830

See Amino acid alignment / Visit BSNT_04199 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:36
# Commandline: needle
#    -asequence dna-align/BSNT_04199___araL.1.9828.seq
#    -bsequence dna-align/RBAM_025830___araL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04199___araL-RBAM_025830___araL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04199___araL-RBAM_025830___araL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04199___araL
# 2: RBAM_025830___araL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 830
# Identity:     573/830 (69.0%)
# Similarity:   573/830 (69.0%)
# Gaps:          52/830 ( 6.3%)
# Score: 1867.0
# 
#
#=======================================

BSNT_04199___      1 ATGGCCAGTCATGATACGCCTGTGTCACCAGCCGGCATTCTGATTGACTT     50
                     |||||||..|.||  |||          |||||||..||||||||||.||
RBAM_025830__      1 ATGGCCAAACTTG--ACG----------CAGCCGGGTTTCTGATTGATTT     38

BSNT_04199___     51 GGACGGTACTGTATTCAGAGGAAATGAGTTGATCGAAGGAGCAAGAGAAG    100
                     .|||||.||.||||||||.||....|||.||||.||.||.||||.|||||
RBAM_025830__     39 AGACGGAACCGTATTCAGGGGGCGGGAGCTGATTGACGGCGCAAAAGAAG     88

BSNT_04199___    101 -CGATCAAAACGCTTAGGAGAATGGG-AAAGAAAATC----GTCTTTTTA    144
                      ||.|| |.||.|||..|..|.|||| ||||     |    |||||||||
RBAM_025830__     89 CCGTTC-ATACCCTTCAGTCACTGGGCAAAG-----CCGTGGTCTTTTTA    132

BSNT_04199___    145 AGCAACCGGGGGAATATCTCCCGTGCCATGTGCAGAAAAAAACTTCTTGG    194
                     ||||||||.||.||..|.||..|.||.||||||.||||.|||||.||.||
RBAM_025830__    133 AGCAACCGCGGCAACCTATCAAGAGCAATGTGCCGAAAGAAACTGCTGGG    182

BSNT_04199___    195 CGCGGGGATTGAAACGGACGTAAACG--ACATTGTTCTGTCATCAAGCGT    242
                     .||.||.||....|||||  |.||||  .|||.||.|||||.||.||.||
RBAM_025830__    183 TGCCGGTATCCGCACGGA--TGAACGGAGCATCGTGCTGTCCTCCAGTGT    230

BSNT_04199___    243 GACAGCGGCTTTTCTGAAAAAACATTATCGTTTTTCAAAGGTATGGGTAC    292
                     |||.||..|.|||.|.||.||.|||||||.|||.||||||||.|||||..
RBAM_025830__    231 GACGGCATCATTTTTAAAGAAGCATTATCCTTTGTCAAAGGTGTGGGTGT    280

BSNT_04199___    293 TTGGGGAGCAAGGCTTGGTTGACGAGCT-------GAGGCTG--GCC--G    331
                     |.||.|||.||||..||..|||.||.||       |.||.||  |||  |
RBAM_025830__    281 TAGGAGAGAAAGGGCTGACTGATGAACTCGCTTTAGCGGGTGTCGCCCTG    330

BSNT_04199___    332 GCGTGCAGAACGCGAACGAACCGAAGGAAGCGGATTGGCTCGTGATCTCC    381
                     ||  |||.|||         |||.|||..||.||.|||||.||.||||||
RBAM_025830__    331 GC--GCAAAAC---------CCGCAGGCGGCAGACTGGCTTGTCATCTCC    369

BSNT_04199___    382 CTTCATGAAACGCTCACGTACGAAGATTTAAATCAAGCCTTTCAAGCGGC    431
                     ||.||||||||..||||.||.||.|||.|.||||..||.|||.|.|||||
RBAM_025830__    370 CTGCATGAAACCGTCACCTATGAGGATCTGAATCTCGCTTTTAAGGCGGC    419

BSNT_04199___    432 TGCCGGCGGCGCTCGTATTATTGCTACAAACAAAGACCGCTCTTTTCCGA    481
                     |.||..||||||.||.||.||.||.||.|||...||||||||.|||||||
RBAM_025830__    420 TTCCTCCGGCGCGCGCATCATCGCCACGAACCGGGACCGCTCCTTTCCGA    469

BSNT_04199___    482 ACGAAGACGGAAATGCCATTGATGTGGCCGGAATGATCGGGGCAATTGAG    531
                     |.||||.|||..|||||||.|||||.||.||||||||||||||.|||||.
RBAM_025830__    470 ATGAAGGCGGCCATGCCATGGATGTCGCGGGAATGATCGGGGCCATTGAA    519

BSNT_04199___    532 GCTTCTGCACAAGCGAAGACTGAACTTGTTGTCGGAAAGCCGTTATGGCT    581
                     ||.||.||...|||.||.||.||.|||||..||||.||.||.|..|||||
RBAM_025830__    520 GCATCCGCCGGAGCAAAAACGGAGCTTGTCATCGGCAAACCTTCTTGGCT    569

BSNT_04199___    582 GATGGCGGAGGCTGCCTGTACAGCAATGGGACTGTCCGCACATGAATGCA    631
                     ||||||.|||||.||.|||..|||..|.|||||..||.|..|.||||||.
RBAM_025830__    570 GATGGCTGAGGCGGCATGTGAAGCGCTCGGACTTCCCCCTGAGGAATGCG    619

BSNT_04199___    632 TGATTATAGGAGACAGCATTGAATCTGACATTGCGATGGGGAAGCTTTAT    681
                     ..|||||.|||||||||.|.||||||||.||.||.|||||.|..||.||.
RBAM_025830__    620 CCATTATCGGAGACAGCCTCGAATCTGATATCGCAATGGGCAGCCTGTAC    669

BSNT_04199___    682 GGCATGAAAAGCGCCTTAGTGCTAACTGGTTCTGCGAAACAGGGCGAACA    731
                     ||.||||||||||..||.||.||.||.||.||.||.||||..||.||.|.
RBAM_025830__    670 GGGATGAAAAGCGTATTGGTTCTGACGGGGTCGGCCAAACTTGGGGAGCC    719

BSNT_04199___    732 GCGTTTGTACACGCCGGATTAT-GTGCTGGATTCTGTTAAGGATGTAACC    780
                     .|||.|.||....||.|| .|| ||.||.||||||.||||.||..|.||.
RBAM_025830__    720 CCGTCTATATGAACCTGA-CATCGTCCTTGATTCTATTAAAGACCTGACA    768

BSNT_04199___    781 AAATTGGCTGAGGAGGGGATTCTGATATGA    810
                     .||||.||..|||||||.||.||..|||||
RBAM_025830__    769 GAATTAGCGAAGGAGGGAATCCTTTTATGA    798


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_04199 and RBAM_025830

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
