Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04197 and RBAM_025810
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:36
# Commandline: needle
# -asequence dna-align/BSNT_04197___araN.1.9828.seq
# -bsequence dna-align/RBAM_025810___araN.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04197___araN-RBAM_025810___araN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04197___araN-RBAM_025810___araN.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04197___araN
# 2: RBAM_025810___araN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1328
# Identity: 992/1328 (74.7%)
# Similarity: 992/1328 (74.7%)
# Gaps: 58/1328 ( 4.4%)
# Score: 3610.0
#
#
#=======================================
BSNT_04197___ 1 ATGAAAAAAATGA---CTGTCTGTTTTCTTGCGCTCATGATGCTGCTTAC 47
||||||||||.|| ||||.|||| |.|.|||.|||||||| |||
RBAM_025810__ 1 ATGAAAAAAACGACCGCTGTATGTT---TGGTGCTGATGATGCT-CTT-- 44
BSNT_04197___ 48 ATTAGTCATTGCCGGGTGTTCAGCAGAA--AAAT--CATCCGGCAAATCG 93
.||..|.|..|||||.||||||..|||| .|.| |..||||| ||
RBAM_025810__ 45 CTTGTTTACCGCCGGCTGTTCACAAGAACGGACTGCCGGCCGGC----CG 90
BSNT_04197___ 94 GGTGAAACTGAGCTGACCTTTTGGACATTTAACGGGCTTCATGAGCAGTT 143
||.|||||.||||||||.||||||||.||||||||.||.||.||.|||||
RBAM_025810__ 91 GGAGAAACGGAGCTGACGTTTTGGACGTTTAACGGTCTGCACGAACAGTT 140
BSNT_04197___ 144 CTATGTAGAAATGGTGAAGGAATGGAATAAAAAATATCCTGACCGCAAAA 193
.|||...||||||||.||.|||||||||.|.||||||||.||.|||||||
RBAM_025810__ 141 TTATCAGGAAATGGTCAAAGAATGGAATCAGAAATATCCGGATCGCAAAA 190
BSNT_04197___ 194 TTAAGCTGAATACGGTCGTTTATCCGTATGGACAAATGCACGATAACTTG 243
|.|||||||||||.||.||||||||.||||||||||||||.|||||.||.
RBAM_025810__ 191 TCAAGCTGAATACCGTTGTTTATCCTTATGGACAAATGCATGATAATTTA 240
BSNT_04197___ 244 TCGATCTCCTTAATAGCGGGAGA-AGGCGTCCCTGATATTGCCGATGTCG 292
|||.|.||..|.||.|||||.|| .|||.|||| |||||.|||||.||.|
RBAM_025810__ 241 TCGGTTTCGCTGATCGCGGGTGAGGGGCTTCCC-GATATAGCCGACGTGG 289
BSNT_04197___ 293 AATTGGCCCGTTTTTCAAACTTTTTGAAGGTCTCTGACATACCGCTTGCC 342
||||...|||.||.||.||||||.||||||.....||.||.|||||||||
RBAM_025810__ 290 AATTAAGCCGGTTCTCGAACTTTCTGAAGGGGAAGGATATCCCGCTTGCC 339
BSNT_04197___ 343 GATTTGACTCCGCTGATTGAAAAGGACCGCGATAAATTCGTTGAGGCGCG 392
|||.||||.||||||||||||||.|||||.|||||.||.||.||.|||||
RBAM_025810__ 340 GATCTGACGCCGCTGATTGAAAAAGACCGAGATAAGTTTGTGGAAGCGCG 389
BSNT_04197___ 393 GCTGACCCTGTACAGCAAAAACGGCAAGCTTTACGGACTCGATACGCATG 442
.|||.|..||||||||||||||||.||..|.|||||.||.|||||.||||
RBAM_025810__ 390 TCTGGCATTGTACAGCAAAAACGGAAAATTGTACGGCCTTGATACACATG 439
BSNT_04197___ 443 TAGGAACAACAGTCATGTTTTATAACATGGATGTGATGAAGAAAGCCGGC 492
|.||.||.||.|||||||||||.|||||||||.|.|||||.|||||.|||
RBAM_025810__ 440 TGGGGACGACCGTCATGTTTTACAACATGGATATCATGAAAAAAGCGGGC 489
BSNT_04197___ 493 GTCAATCCTGACGATATTAAAACATGGGATGATTACCATAAAGCCGGACA 542
||..||||.|.|...|||||.||||||||.||||||| |.|||.||
RBAM_025810__ 490 GTTGATCCCGCCTCCATTAAGACATGGGAAGATTACC-----GGCGGGCA 534
BSNT_04197___ 543 G-----AAAGTGCGCAAAGTGACCGGGAAGCCGATGGGAACGGTAGAAAC 587
| ||||||||..|||...|.||.||.||||||||||||||.|||||
RBAM_025810__ 535 GGGAAAAAAGTGCGTGAAGCCGCTGGAAAACCGATGGGAACGGTTGAAAC 584
BSNT_04197___ 588 AAATGATTCCGGAACGTTCTTATCTATGATTTCACAGCAAAACTCAGGTT 637
|||.||.||||..||.|||.||||.|||||||||||||||...|||||.|
RBAM_025810__ 585 AAACGACTCCGCCACATTCCTATCCATGATTTCACAGCAAGGGTCAGGCT 634
BSNT_04197___ 638 ATTTTGATAAAAACGGCAAGCTGATCCTCAATAATGACACCAACGTCAAA 687
|.|.....||||||||.||..||||.||.| |||.||| |.|.||
RBAM_025810__ 635 ACTACAGCAAAAACGGAAAATTGATTCTGA------ACAGCAA-GACGAA 677
BSNT_04197___ 688 -------ACACTTCAATATTTAAAAGACATGATCAATGATAAAACGATGA 730
|||||..|.|||.||||.||||||.|.|||||||||||..|..
RBAM_025810__ 678 TACAGACACACTGAATTATGTAAAGGACATGGTAAATGATAAAACCCTTC 727
BSNT_04197___ 731 TTCCTGCGCCGGGCGGCGGGCATCACAGTGAAGAATACTACGGCTTTATG 780
|.||.||.||.||||||||.||||||||.||||||||||||||.||||||
RBAM_025810__ 728 TGCCGGCTCCCGGCGGCGGCCATCACAGCGAAGAATACTACGGTTTTATG 777
BSNT_04197___ 781 AACCAAGGAGGAGCTGCTTCAGTCCTCATGCCGATTTGGTATATGGGAAG 830
||.||.||.||.||.||.|||||.||.|||||.||||||||.||||||.|
RBAM_025810__ 778 AATCAGGGCGGGGCAGCCTCAGTGCTGATGCCCATTTGGTACATGGGACG 827
BSNT_04197___ 831 ATTTATCGACTATATGCCTGATCTGAAAGGGAAAATTGCCATCAGGCCGC 880
.||||||||.||||||||||||.|.|||||.|||||.||.||....||..
RBAM_025810__ 828 GTTTATCGATTATATGCCTGATTTAAAAGGAAAAATGGCGATTTACCCTA 877
BSNT_04197___ 881 TCCCGGCATGGAAAGAGGGAGGCGACCGCTCGGCAGGTTTGGGCGGTACG 930
|.|||||.||||||||.||.||.|||.|.||.||.|||||.|||||.|||
RBAM_025810__ 878 TGCCGGCCTGGAAAGAAGGCGGTGACAGATCAGCGGGTTTAGGCGGAACG 927
BSNT_04197___ 931 GCAACTGTTGTGCCGAAACAAGCCAAGCATGTTGAGTTAGCAAAAGAGTT 980
||.||.||.||||||||.||.||..|.|||.|..||.|.||.|||||.||
RBAM_025810__ 928 GCCACCGTCGTGCCGAAGCAGGCTGAACATCTGAAGCTCGCGAAAGAATT 977
BSNT_04197___ 981 TTTAGCCTTTGCGAAGGGCTCTAAAGAAGGAAACAAAAAGCTCTGGAGCG 1030
|.|.|..||||||||.||.||.||.|||||.||||.||||||.||||..|
RBAM_025810__ 978 TCTCGGTTTTGCGAAAGGTTCGAAGGAAGGGAACATAAAGCTTTGGACGG 1027
BSNT_04197___ 1031 TACTAGGGTTTGACCCGCTTCGCTGGGATGTCTGGAGCTCCAAGGAATTG 1080
|.||.||.|||||||||||.||||||||.||.|||...||.||.||||||
RBAM_025810__ 1028 TGCTCGGCTTTGACCCGCTCCGCTGGGACGTGTGGGATTCAAAAGAATTG 1077
BSNT_04197___ 1081 AAAGAGAAAAACAAGTACACGGATTACTTCCAAAACGGAACAGGC-ATTT 1129
||.||||||||||||||||||||||.|||||..|||||.|| |.| ||||
RBAM_025810__ 1078 AAGGAGAAAAACAAGTACACGGATTTCTTCCGGAACGGTAC-GTCAATTT 1126
BSNT_04197___ 1130 TTTCCGTGCTGCTCGATATCAAGGATGAAATCAATCCAATTTATTTACAT 1179
|||||..|||.||.||.||.||.|||||.||||||||.||||||.|.|||
RBAM_025810__ 1127 TTTCCTCGCTCCTTGAAATAAAAGATGAGATCAATCCGATTTATCTGCAT 1176
BSNT_04197___ 1180 GAGGATTTTGCCAAGGCTTCAGA---CCTTGTCA-ACAGAAGCGTATTGT 1225
||.||.||..|.||.||..|.|| |.|||||| ||| .||..|||
RBAM_025810__ 1177 GAAGACTTCTCTAAAGCGGCTGATCTCGTTGTCAGACA----AGTGCTGT 1222
BSNT_04197___ 1226 TCGACGCGCTTAAATCTCAGCAAAAAACGCCTAAACAAGCCTTGGACAGA 1275
||||.|||||.||..|.|||.|||||||.|||||..||||||||||| ||
RBAM_025810__ 1223 TCGATGCGCTGAAGACGCAGGAAAAAACACCTAAGGAAGCCTTGGAC-GA 1271
BSNT_04197___ 1276 -GCGGCAGGTGAACTGAAACAGAAATAG 1302
|||||||...||.| |.||||||||
RBAM_025810__ 1272 GGCGGCAGAGCAATT---AGAGAAATAG 1296
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