Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04196 and RBAM_025800
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:36
# Commandline: needle
# -asequence dna-align/BSNT_04196___araP.1.9828.seq
# -bsequence dna-align/RBAM_025800___araP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04196___araP-RBAM_025800___araP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04196___araP-RBAM_025800___araP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04196___araP
# 2: RBAM_025800___araP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 946
# Identity: 733/946 (77.5%)
# Similarity: 733/946 (77.5%)
# Gaps: 8/946 ( 0.8%)
# Score: 2784.0
#
#
#=======================================
BSNT_04196___ 1 ATGAAACCTGTGAAAACGGGAACGGTTCATCCCGTTCCTTCAGCTGCGAA 50
||||.||||||.||.||.|..||.|..||..|||||.||.||| |.||.|
RBAM_025800__ 1 ATGAGACCTGTAAAGACAGAGACAGCGCAAACCGTTTCTGCAG-TCCGGA 49
BSNT_04196___ 51 ACAATCAG-GCTGGCGAGATGTATTTTATTCGAAAAAAGCGGCGCCCTAT 99
|.||.|.| ||.||||..||||..|.|||||.||||||||||||||.|||
RBAM_025800__ 50 AGAAGCCGCGCCGGCGCAATGTGCTGTATTCAAAAAAAGCGGCGCCTTAT 99
BSNT_04196___ 100 CTGTTTACAGCGCCATTCGTTTTATCCTTTCTCGTATTTTTTCTATACCC 149
||.|||||.||||||||..|..|.||.||||||||.||.|||.|.||.||
RBAM_025800__ 100 CTTTTTACGGCGCCATTTATCATTTCGTTTCTCGTTTTCTTTTTGTATCC 149
BSNT_04196___ 150 CATCATTAGTGTCTTCATCATGAGCTTTCAAAGAATATTGCCGGGAGAGG 199
.||.||.||.||.||.|||||||||||||||.|.|||.||||||||||..
RBAM_025800__ 150 GATTATCAGCGTGTTTATCATGAGCTTTCAACGGATACTGCCGGGAGAAA 199
BSNT_04196___ 200 TGTCCTTTGTCGGTTTGTCTAATTATACAGCGCTAAACAACCCGACGTTC 249
|..|.||||||||.||.||.||||||||.||.||....||.||.||.||.
RBAM_025800__ 200 TTACATTTGTCGGGTTTTCCAATTATACCGCTCTTCTTAATCCAACCTTT 249
BSNT_04196___ 250 TATACCGCCCTTTGGAATACGCTGGAATACACCTTTTGGACGCTGATCGT 299
|||||.||..|.|..||.||..|||||||.|||||.||||||||||||||
RBAM_025800__ 250 TATACGGCATTATTTAACACATTGGAATATACCTTCTGGACGCTGATCGT 299
BSNT_04196___ 300 GCTGATTCCTGTCCCATTGCTTCTGGCCAT-ATTCCTGAATTCAAAGCTG 348
|||||||||.||.||..|.|||.||||..| ||| ||||||||.|||||.
RBAM_025800__ 300 GCTGATTCCGGTGCCGCTTCTTTTGGCGGTGATT-CTGAATTCGAAGCTC 348
BSNT_04196___ 349 GTCAAATTTAGAAATATATTTAAATCAGCACTATTTATCCCGGCATTGAC 398
||||..||.||||||.|.||||||||.||.||.|||.|.|||||.||.||
RBAM_025800__ 349 GTCAGGTTCAGAAATGTGTTTAAATCGGCTCTGTTTGTACCGGCTTTAAC 398
BSNT_04196___ 399 CTCAACCATTGTCGCGGGGATCATTTTTCGGCTGATCTTCGGAGAAATGG 448
.||.||.||.||.||||||||.|||||.||.|||||.||||||||||||.
RBAM_025800__ 399 ATCGACGATCGTAGCGGGGATTATTTTCCGTCTGATGTTCGGAGAAATGA 448
BSNT_04196___ 449 AAACGTCTCTGGCCAATTCCA--TCCTACTCAAACTCGGCTTTTCACCTC 496
|.|||||.||.||.|| |.| |..|..|.||.||.|||...|||||.|
RBAM_025800__ 449 ATACGTCGCTTGCAAA--CGAGCTGATGATGAAGCTTGGCGCATCACCCC 496
BSNT_04196___ 497 AGAACTGGATGAACAATGAACATACCGGCATGTTTTTGATGGTGCTGCTT 546
|.||||||.|.|||||..||..|||||||||||||||.||||||||||||
RBAM_025800__ 497 AAAACTGGCTCAACAACAAAGGTACCGGCATGTTTTTAATGGTGCTGCTT 546
BSNT_04196___ 547 GCTTCATGGAGATGGATGGGAATCAACATCCTTTACTTTTTAGCCGGTTT 596
||.||||||||.||||||||.||.|||||.|||||||||.|.||.||.||
RBAM_025800__ 547 GCGTCATGGAGGTGGATGGGGATTAACATTCTTTACTTTCTGGCGGGATT 596
BSNT_04196___ 597 GCAAAATGTGCCGAAAGAGCTGTACGAAGCCGCTGATATAGACGGCGCGA 646
||||||.|||||||||||..||||.|||||.|||||.||.|||||.||||
RBAM_025800__ 597 GCAAAACGTGCCGAAAGAATTGTATGAAGCGGCTGAAATTGACGGGGCGA 646
BSNT_04196___ 647 ATACAATGAAAAAATTTCTGCACATCACGCTGCCGTTTCTCAAGCCTGTA 696
.|||...||||||.||.|.|||.||.||.||.||.|||.|.|||||.||.
RBAM_025800__ 647 GTACGTGGAAAAAGTTCCGGCATATTACCCTTCCATTTTTAAAGCCGGTG 696
BSNT_04196___ 697 ACCGTATATGTGCTGACCATCAGCATTATCGGCGGCTTCAGGATGTTTGA 746
.||||.||||||.|.||.|||||.|||||||||||.|||||.||||||||
RBAM_025800__ 697 TCCGTTTATGTGTTAACGATCAGTATTATCGGCGGTTTCAGAATGTTTGA 746
BSNT_04196___ 747 GGAAAGCTACGTCCTTTGGCAGAATAATTCCCCGGGTAATATTGGTCTGA 796
|||||||||.||.|||||||||||||||||||||||.|||||.||.||.|
RBAM_025800__ 747 GGAAAGCTATGTGCTTTGGCAGAATAATTCCCCGGGCAATATCGGCCTCA 796
BSNT_04196___ 797 CGCTTGTTGGATATTTGTATCAGCAGGGGCTTGCCTACAACGAAATGGGG 846
|||||||.||.|||||.|||||||||||||||||.|||||||||||||||
RBAM_025800__ 797 CGCTTGTCGGTTATTTATATCAGCAGGGGCTTGCATACAACGAAATGGGG 846
BSNT_04196___ 847 TACGGAGCAGCCATCGGCATCGTGCTTTTGATTGTGATCCTTGTTGTCAG 896
|||||.||.||.|||||.||.||.||||||.||||.|||.|..|.|||||
RBAM_025800__ 847 TACGGGGCCGCAATCGGAATTGTCCTTTTGCTTGTCATCTTACTAGTCAG 896
BSNT_04196___ 897 CCTGATTTCATTAAAGCTGTCAGGCTCGTTTAAGGGGGAGGGATAA 942
.||..|||||.|.||.|||||.||.||||||||.||||||||||||
RBAM_025800__ 897 TCTTGTTTCACTGAAACTGTCCGGTTCGTTTAAAGGGGAGGGATAA 942
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