Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04195 and RBAM_025790

See Amino acid alignment / Visit BSNT_04195 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:36
# Commandline: needle
#    -asequence dna-align/BSNT_04195___araQ.1.9828.seq
#    -bsequence dna-align/RBAM_025790___araQ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04195___araQ-RBAM_025790___araQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04195___araQ-RBAM_025790___araQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04195___araQ
# 2: RBAM_025790___araQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 852
# Identity:     683/852 (80.2%)
# Similarity:   683/852 (80.2%)
# Gaps:          15/852 ( 1.8%)
# Score: 2717.0
# 
#
#=======================================

BSNT_04195___      1 ATGTTGCGGCACAGTCCTCA-GTTCAGCGTTTACAGAATTGCGCTAACCC     49
                        |||||..|||.| |.|| |||...|||.||||||.|.|||.|.|||.
RBAM_025790__      1 ---TTGCGTAACAAT-CACATGTTTTCCGTGTACAGAGTCGCGTTTACCT     46

BSNT_04195___     50 TGTTTTTTATTATGCTGAGCCTATTGTATCTTTTTCCGATTTTCTGT---     96
                     ||||||||||.|||||||||||.||||||.|.||||||||..|||||   
RBAM_025790__     47 TGTTTTTTATCATGCTGAGCCTGTTGTATATCTTTCCGATGATCTGTCTA     96

BSNT_04195___     97 TTGCTTTTAGGATCATTAAAGCCCTCATCTGAGCTTTTGCGTGTGGGGCT    146
                     ||||   |.||.||.||||||||.|||||||||||..|||||.|.|||||
RBAM_025790__     97 TTGC---TCGGTTCTTTAAAGCCGTCATCTGAGCTGATGCGTATCGGGCT    143

BSNT_04195___    147 CAATCT-CGACATTGATCCTAAAGTAATGAGTCTTGATAATTATACATTT    195
                     .||||| ||.| |||||||..|.||.|||||.||||||||.||.||.|.|
RBAM_025790__    144 GAATCTGCGTC-TTGATCCGGATGTGATGAGCCTTGATAACTACACCTAT    192

BSNT_04195___    196 CTGTTTAACGGCGGAAGCATTTATTTCAAATGGTTTTTTAACAGTCTTGT    245
                     .||||.|||||.||.|||||||||||||||||||||||||||||.||..|
RBAM_025790__    193 TTGTTCAACGGGGGGAGCATTTATTTCAAATGGTTTTTTAACAGCCTGCT    242

BSNT_04195___    246 ACTTGGGCTTTTCACAACCATGCTCACCCTGTTTTTTTCTTCGATGATCG    295
                     .||.||..||.||||.||..|.|||||.|||||||||||.||..||||||
RBAM_025790__    243 GCTCGGTGTTCTCACCACGGTTCTCACGCTGTTTTTTTCCTCTTTGATCG    292

BSNT_04195___    296 GGTACGGGCTTGCGGTTTATGATTTTAAGGGCAGAAATATCATCTTTGTT    345
                     |.|||||.||.|..||.||.||.|||||.|||||||||||.||.||.|||
RBAM_025790__    293 GCTACGGACTCGGTGTCTACGAATTTAAAGGCAGAAATATTATTTTCGTT    342

BSNT_04195___    346 CTTGTGCTGATTATCATGATGGTTCCGCTGGAAGTGATGATGCTTCCTCT    395
                     |||||||||||.||.||||||||.||.||.|||||||||||||||||..|
RBAM_025790__    343 CTTGTGCTGATCATTATGATGGTGCCTCTTGAAGTGATGATGCTTCCGTT    392

BSNT_04195___    396 GTTTAAGCTTACCGTCGGACTGCACTTGATCGATTCATATACAGGTGTCA    445
                     |||.||..|.||.||.||.||.||.|||||||||||.|||||.||.||.|
RBAM_025790__    393 GTTCAAATTGACGGTGGGTCTTCATTTGATCGATTCTTATACGGGAGTGA    442

BSNT_04195___    446 TATTGCCGTTTATCGTTTCACCTGTTGCCGTTTTCTTTTTTAGGCAATAT    495
                     |..||||||||||.||.||.|||||.|||||.||||||||..||||||||
RBAM_025790__    443 TTCTGCCGTTTATTGTGTCGCCTGTCGCCGTGTTCTTTTTCCGGCAATAT    492

BSNT_04195___    496 GCTCTTGGCCTTCC-AAGAGATCTGCTGGACTCTGCAAGGATGGACGGCT    544
                     ||.||.||.||||| ||| ||||||||.||.||.||.||.||||||||||
RBAM_025790__    493 GCGCTCGGACTTCCGAAG-GATCTGCTTGATTCAGCGAGAATGGACGGCT    541

BSNT_04195___    545 GTACGGAATTCGGCATCTTTTTCAGGATTATGGCACCGCTGATGAAACCG    594
                     |.||.|||||||||||.||||||||.||||||||.|||||.|||||||||
RBAM_025790__    542 GCACCGAATTCGGCATTTTTTTCAGAATTATGGCGCCGCTCATGAAACCG    591

BSNT_04195___    595 GCTTTCGGTGCCATGATTATCCTTCAGTCCTTAAACAGCTGGAACAACTT    644
                     ||.|||||.||.|||||.||.|||||.||.||||||||||||||.|||||
RBAM_025790__    592 GCATTCGGGGCAATGATCATTCTTCAATCTTTAAACAGCTGGAATAACTT    641

BSNT_04195___    645 CTTGTGGCCGCTGATTGTGCTTCGGTCGAAAGAAATGTTTACGCTTCCAA    694
                     .||.|||||||||||.||||||||||||||||||||||||||||||||||
RBAM_025790__    642 TTTATGGCCGCTGATCGTGCTTCGGTCGAAAGAAATGTTTACGCTTCCAA    691

BSNT_04195___    695 TAGGGCTGTCCAGCTTGCTGAGCCCTTATGGCAACAACTATGACATGCTT    744
                     |.||.||.||..|..|||||||.||.||.||||||||||||||||||||.
RBAM_025790__    692 TCGGACTTTCAGGGCTGCTGAGTCCGTACGGCAACAACTATGACATGCTG    741

BSNT_04195___    745 ATATCCGGCTCAGTATTTGCGATTTTGCCGGTGATTATCATTTTCTTGTT    794
                     ||.|||||.||.||.||||||||..||||||||||.|||||.||||||||
RBAM_025790__    742 ATTTCCGGGTCCGTTTTTGCGATACTGCCGGTGATCATCATATTCTTGTT    791

BSNT_04195___    795 TTTCCAAAAGTACTTTATCTCCGGCCTGACGGTAGGGGGAGTCAAAGGTT    844
                     |||||||||.|||||.||.|||||.||.||.|||||.|||||.||.||.|
RBAM_025790__    792 TTTCCAAAAATACTTCATTTCCGGACTCACAGTAGGCGGAGTGAAGGGAT    841

BSNT_04195___    845 AA    846
                     |.
RBAM_025790__    842 AG    843


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_04195 and RBAM_025790

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
