Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04180 and RBAM_025710
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:35
# Commandline: needle
# -asequence dna-align/BSNT_04180___pheS.1.9828.seq
# -bsequence dna-align/RBAM_025710___pheS.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04180___pheS-RBAM_025710___pheS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04180___pheS-RBAM_025710___pheS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04180___pheS
# 2: RBAM_025710___pheS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1049
# Identity: 853/1049 (81.3%)
# Similarity: 853/1049 (81.3%)
# Gaps: 25/1049 ( 2.4%)
# Score: 3503.5
#
#
#=======================================
BSNT_04180___ 1 ---ATGGAAGAAAAGCTAAAACAGCTGGAACAAGAAGCTTTAGAACAAGT 47
||||||||.|||||.||||||||.||||..||||||..||||.||||
RBAM_025710__ 1 ATGATGGAAGAGAAGCTTAAACAGCTTGAACTGGAAGCTGCAGAAAAAGT 50
BSNT_04180___ 48 AGAAGCGGCAAGCTCATTGAAGGTTGTCAATGATATTCGGGTGCAATATC 97
|||||||||..|.|||||.||.|..||.||.||.||||||||||||||||
RBAM_025710__ 51 AGAAGCGGCGGGTTCATTAAAAGAAGTTAACGACATTCGGGTGCAATATC 100
BSNT_04180___ 98 TCGGAAAAAAAGGGCCGATTACAGAAGTGCTGCGCGGAATGGGCAAGCTT 147
||||||||||||||||||||||||||||.||.|||||.||||||||.||.
RBAM_025710__ 101 TCGGAAAAAAAGGGCCGATTACAGAAGTTCTCCGCGGCATGGGCAAACTG 150
BSNT_04180___ 148 TCTGCTGAGGAACGTCCAAAAATGGGGGCCCTCGCGAACGAAGTAAGGGA 197
||.||.||.||.||.||.||||||||.||.|||||.||.|||||.||.||
RBAM_025710__ 151 TCCGCCGAAGAGCGCCCGAAAATGGGAGCGCTCGCCAATGAAGTGAGAGA 200
BSNT_04180___ 198 GCGTATTGC--CAATGCGATTGCTGACAAAAACGAGAAGCTTGAAGAAGA 245
|||.||||| || ||.|||.|.|..|||||.||..||||||||.||||
RBAM_025710__ 201 GCGCATTGCAGCA--GCCATTACGGCGAAAAATGAACAGCTTGAACAAGA 248
BSNT_04180___ 246 GGAAATGAAACAGAAGCTTGCAG--GACAGACAATTGACGTCACGCTGCC 293
.||||||||..|.||.|| ||| |.|||||.|||||||||||..||||
RBAM_025710__ 249 AGAAATGAATAAAAAACT--CAGCAGCCAGACGATTGACGTCACATTGCC 296
BSNT_04180___ 294 GGGGAACCCTGTTGCAG-------TCGGCGGCCGCCATCCGCTCACTGTT 336
||| |.|| ||| |||||||.|||||||||||.||.||.
RBAM_025710__ 297 GGG-----CAGT--CAGGTAAACATCGGCGGACGCCATCCGCTGACGGTC 339
BSNT_04180___ 337 GTCATTGAAGAAATTGAAGATTTATTTATCGGTATGGGCTACACAGTCGA 386
||.|||||||||||||||||||||||||||||.|||||.||.||.|||||
RBAM_025710__ 340 GTTATTGAAGAAATTGAAGATTTATTTATCGGCATGGGATATACCGTCGA 389
BSNT_04180___ 387 GGAAGGGCCAGAGGTTGAAACGGATTACTACAACTTCGAATCGCTCAATC 436
.|||||.|||||.||.|||||||||||.||||||||.||..||||.||.|
RBAM_025710__ 390 AGAAGGCCCAGAAGTGGAAACGGATTATTACAACTTTGAGGCGCTGAACC 439
BSNT_04180___ 437 TTCCGAAAGAACACCCTGCGCGCGATATGCAGGACAGCTTTTACATCACA 486
|.|||||.||||||||.||.|||||.||||||||||||||||||||.|||
RBAM_025710__ 440 TGCCGAAGGAACACCCGGCCCGCGACATGCAGGACAGCTTTTACATTACA 489
BSNT_04180___ 487 GAGGAAACTTTGATGAGAACGCAAACTTCTCCTGTCCAAACACGGACGAT 536
||.||||...|||||||||||||.||.||.||.||.||.||.||.|||||
RBAM_025710__ 490 GAAGAAATGCTGATGAGAACGCAGACGTCACCGGTGCAGACGCGCACGAT 539
BSNT_04180___ 537 GGAAAAGCATAAAGGCAAAGGTCCCGTTAAAATCATTTGCCCGGGTAAAG 586
|||||||||||||||.|||||.|||||.|||||||||||.||.|||||||
RBAM_025710__ 540 GGAAAAGCATAAAGGAAAAGGCCCCGTCAAAATCATTTGTCCCGGTAAAG 589
BSNT_04180___ 587 TATATCGCCGTGATAACGATGATGCGACGCACTCTCACCAATTTATGCAA 636
|.||||||||.||.||||||||.|||||.||.||.||.||.||.|||||.
RBAM_025710__ 590 TGTATCGCCGCGACAACGATGACGCGACACATTCCCATCAGTTCATGCAG 639
BSNT_04180___ 637 ATTGAAGGGCTTGTCGTTGACAAAAACATCAGCATGAGTGATTTAAAAGG 686
||.||.||.||.|||||.|||...||.|||||||||||.||..|.|||||
RBAM_025710__ 640 ATCGAGGGTCTCGTCGTCGACCGCAAAATCAGCATGAGCGACCTGAAAGG 689
BSNT_04180___ 687 AACGCTTGAACTCGTTGCGAAAAAAATGTTCGGGCAAGACCGTGAAATCA 736
.|||||||||.|.||.||.||||||||||||||.||||||||||||||||
RBAM_025710__ 690 CACGCTTGAATTGGTCGCCAAAAAAATGTTCGGCCAAGACCGTGAAATCA 739
BSNT_04180___ 737 GACTCCGCCCAAGCTTCTTCCCGTTTACTGAGCCTTCAGTAGAAGTGGAT 786
|.|||||.||.|||||.|||||.||.||.||||||||.||.||.||||||
RBAM_025710__ 740 GGCTCCGTCCGAGCTTTTTCCCATTCACAGAGCCTTCTGTCGAGGTGGAT 789
BSNT_04180___ 787 GTGACATGCTTTAAATGTGGTGGAAACGGCTGCTCAGTATGTAAAGGAAC 836
|||||.||||||||.||.||.|||.|.||||||||.||.||.|||..|||
RBAM_025710__ 790 GTGACCTGCTTTAAGTGCGGCGGACAAGGCTGCTCCGTCTGCAAAAAAAC 839
BSNT_04180___ 837 AGGCTGGATTGAAATCCTCGGTGCCGGAATGGTTCACCCGAACGTGCTTA 886
|||||||||.|||||.|||||.|||||.||||||||||||||||||||.|
RBAM_025710__ 840 AGGCTGGATCGAAATTCTCGGCGCCGGCATGGTTCACCCGAACGTGCTGA 889
BSNT_04180___ 887 AAATGGCTGGCTTTGATCCGAAGGAATATCAGGGCTTCGCATTCGGAATG 936
|.|||||.||.||..||||..|||||||.|||||.||.||.|||||||||
RBAM_025710__ 890 AGATGGCCGGATTCAATCCTGAGGAATACCAGGGTTTTGCTTTCGGAATG 939
BSNT_04180___ 937 GGTGTTGAGCGCATCGCGATGCTGAAATACGGCATTGATGATATCCGCCA 986
||||||||.||.||||||||||||||||||||||||||.|||||||||||
RBAM_025710__ 940 GGTGTTGAACGTATCGCGATGCTGAAATACGGCATTGAAGATATCCGCCA 989
BSNT_04180___ 987 CTTCTATACAAACGATGTCAGATTTATTTCGCAGTTTAAACAGGCGTAA 1035
.||||||||.||.|||||||||||.||||||||||||||||||||||||
RBAM_025710__ 990 TTTCTATACCAATGATGTCAGATTCATTTCGCAGTTTAAACAGGCGTAA 1038
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