Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04110 and RBAM_025350
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:29
# Commandline: needle
# -asequence dna-align/BSNT_04110___ilvC.1.9828.seq
# -bsequence dna-align/RBAM_025350___ilvC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04110___ilvC-RBAM_025350___ilvC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04110___ilvC-RBAM_025350___ilvC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04110___ilvC
# 2: RBAM_025350___ilvC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1029
# Identity: 877/1029 (85.2%)
# Similarity: 877/1029 (85.2%)
# Gaps: 0/1029 ( 0.0%)
# Score: 3777.0
#
#
#=======================================
BSNT_04110___ 1 ATGGTAAAAGTATATTATAACGGTGATATCAAAGAGAACGTATTGGCAGG 50
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_025350__ 1 ATGGTAAAAGTATATTATAACGGTGATATCAAAGAGAACGTATTGGCAGG 50
BSNT_04110___ 51 CAAAACAGTAGCGGTTATCGGATACGGTTCGCAAGGCCACGCACATGCCC 100
.||||.|||||||.|||||||.||||||||.|||||.|||||||||||.|
RBAM_025350__ 51 TAAAAAAGTAGCGATTATCGGTTACGGTTCACAAGGTCACGCACATGCGC 100
BSNT_04110___ 101 TGAACCTTAAAGAAAGCGGAGTAGACGTGATCGTCGGTGTTAGACAAGGA 150
|||||.|.||||||||||||.|.||.||.||.|||||.||.|||||||||
RBAM_025350__ 101 TGAACTTAAAAGAAAGCGGAATTGATGTCATTGTCGGCGTCAGACAAGGA 150
BSNT_04110___ 151 AAATCTTTCACGCAAGCCCAAGAAGACGGACATAAAGTTTTTTCAGTAAA 200
|||||.||.||.||.||||||||||||||.|||.||||.|||||.||||.
RBAM_025350__ 151 AAATCATTTACACAGGCCCAAGAAGACGGTCATCAAGTCTTTTCGGTAAG 200
BSNT_04110___ 201 AGAAGCGGCAGCCCAAGCTGAAATCATCATGGTTCTGCTTCCTGATGAAC 250
|||||||||.|||||.|||||.|||||.||||||||.|||||.|||||||
RBAM_025350__ 201 AGAAGCGGCTGCCCAGGCTGATATCATTATGGTTCTTCTTCCGGATGAAC 250
BSNT_04110___ 251 AGCAGCAAAAAGTATACGAAGCTGAAATCAAAGATGAATTGACAGCAGGA 300
||||||||||||||||.||||||||||||||||||||||||||.||.||.
RBAM_025350__ 251 AGCAGCAAAAAGTATATGAAGCTGAAATCAAAGATGAATTGACGGCGGGC 300
BSNT_04110___ 301 AAATCATTAGTATTTGCTCACGGATTTAACGTGCATTTCCATCAAATTGT 350
||.|||||||||||.||.||||||||||||||.|||||||||||.||.||
RBAM_025350__ 301 AAGTCATTAGTATTCGCACACGGATTTAACGTCCATTTCCATCAGATCGT 350
BSNT_04110___ 351 TCCTCCGGCGGATGTTGATGTATTCTTGGTAGCGCCTAAAGGTCCGGGAC 400
.|||||.||.|||||.|||||||||.|.||.||.||||||||.|||||||
RBAM_025350__ 351 GCCTCCTGCCGATGTGGATGTATTCCTTGTCGCCCCTAAAGGACCGGGAC 400
BSNT_04110___ 401 ACTTGGTCAGAAGAACATATGAGCAAGGAGCCGGCGTACCTGCATTGTTC 450
||.|.|||||||||||||||||.|||||.||.||||||||.||||||||.
RBAM_025350__ 401 ACCTTGTCAGAAGAACATATGAACAAGGCGCGGGCGTACCGGCATTGTTT 450
BSNT_04110___ 451 GCAATCTATCAAGATGTGACTGGAGAAGCAAGAGACAAAGCTCTCGCATA 500
||.|||||.||.|||||..|.||.|||||.|.|||.|..|||||.||.||
RBAM_025350__ 451 GCCATCTACCAGGATGTATCAGGCGAAGCGAAAGATACGGCTCTTGCTTA 500
BSNT_04110___ 501 TGCAAAAGGAATCGGTGGCGCAAGAGCGGGAGTATTAGAAACGACATTTA 550
|||||||||||||||.||.||..|.|||||.||..|.|||||.|||||||
RBAM_025350__ 501 TGCAAAAGGAATCGGCGGAGCGCGTGCGGGCGTTCTTGAAACAACATTTA 550
BSNT_04110___ 551 AAGAAGAAACAGAAACAGATTTGTTCGGTGAGCAAGCGGTTCTTTGCGGC 600
|.||||||||.|||||.|||||||||||||||||.||.|||||.|||||.
RBAM_025350__ 551 AGGAAGAAACGGAAACGGATTTGTTCGGTGAGCAGGCTGTTCTGTGCGGA 600
BSNT_04110___ 601 GGATTAAGCGCGCTTGTCAAAGCAGGATTTGAAACATTAACTGAAGCAGG 650
||.||||..||||||||||||||.||.||||||||..|.||.|||||.||
RBAM_025350__ 601 GGTTTAACGGCGCTTGTCAAAGCGGGTTTTGAAACGCTGACAGAAGCCGG 650
BSNT_04110___ 651 TTATCAGCCTGAACTTGCATACTTCGAGTGTCTGCATGAGCTGAAATTAA 700
.||.|||||||||||.||||||||||||||||||||.||.|||||..|.|
RBAM_025350__ 651 CTACCAGCCTGAACTCGCATACTTCGAGTGTCTGCACGAACTGAAGCTGA 700
BSNT_04110___ 701 TCGTAGACCTTATGTACGAAGAAGGACTTGCAGGAATGAGATATTCAATT 750
||||||||.|.|||||.|||||||||.|.||.||.||||||||.||.||.
RBAM_025350__ 701 TCGTAGACTTGATGTATGAAGAAGGATTGGCGGGCATGAGATACTCTATC 750
BSNT_04110___ 751 TCTGACACAGCACAGTGGGGAGATTTCGTATCAGGCCCTCGCGTTGTGGA 800
|||||.||.||.||.|||||||||||.||.|||||.||.|||||.||.||
RBAM_025350__ 751 TCTGATACGGCTCAATGGGGAGATTTTGTCTCAGGGCCGCGCGTAGTCGA 800
BSNT_04110___ 801 TGCTAAAGTAAAAGAATCGATGAAAGAAGTATTAAAAGATATCCAAAACG 850
|||.||.||||||||||||||||||.|||||||||..|||||.|||||||
RBAM_025350__ 801 TGCGAAGGTAAAAGAATCGATGAAACAAGTATTAACGGATATTCAAAACG 850
BSNT_04110___ 851 GTACATTCGCAAAAGAATGGATCGTCGAAAACCAAGTAAACCGTCCTCGT 900
||||||||||.||||||||||||||.|||||||||||.||||||||||||
RBAM_025350__ 851 GTACATTCGCGAAAGAATGGATCGTGGAAAACCAAGTGAACCGTCCTCGT 900
BSNT_04110___ 901 TTCAACGCTATCAATGCGAGCGAGAACGAACATCAAATCGAAGTAGTGGG 950
|||||.||.||||||||.||.||.|||||.|||||.||.|||...||.||
RBAM_025350__ 901 TTCAATGCGATCAATGCAAGTGAAAACGAGCATCAGATTGAAAAGGTCGG 950
BSNT_04110___ 951 AAGAAAGCTTCGTGAAATGATGCCGTTTGTGAAACAAGGCAAGAAGAAGG 1000
.|||.|||||||||||||||||||||||||.|||||||||||.|||||||
RBAM_025350__ 951 CAGACAGCTTCGTGAAATGATGCCGTTTGTCAAACAAGGCAAAAAGAAGG 1000
BSNT_04110___ 1001 AAGCGGTGGTCTCCGTTGCGCAAAATTAA 1029
|||||||||||||.|||||||||||||||
RBAM_025350__ 1001 AAGCGGTGGTCTCTGTTGCGCAAAATTAA 1029
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