Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04107 and RBAM_025320
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:29
# Commandline: needle
# -asequence dna-align/BSNT_04107___leuC.1.9828.seq
# -bsequence dna-align/RBAM_025320___leuC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04107___leuC-RBAM_025320___leuC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04107___leuC-RBAM_025320___leuC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04107___leuC
# 2: RBAM_025320___leuC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1426
# Identity: 1159/1426 (81.3%)
# Similarity: 1159/1426 (81.3%)
# Gaps: 14/1426 ( 1.0%)
# Score: 4690.5
#
#
#=======================================
BSNT_04107___ 1 ATGATGCCTCGAACAATCATCGAAAAGATTTGGGATCAGCATATTGTAAA 50
|||||||||||||||||||||||||||||||||||||.||||.|||||||
RBAM_025320__ 1 ATGATGCCTCGAACAATCATCGAAAAGATTTGGGATCGGCATGTTGTAAA 50
BSNT_04107___ 51 ACATGGTGAGGGAAAGCCGGATCTTCTCTATATTGATTTGCACCTCATTC 100
|...|||||.|||||.||.||.|||||||||||||||.||||||||||||
RBAM_025320__ 51 AAGCGGTGAAGGAAAACCCGACCTTCTCTATATTGATCTGCACCTCATTC 100
BSNT_04107___ 101 ATGAGGTGACGTCTCCTCAGGCATTTGAAGGCTTGAGACAAAAGGGAAGA 150
||||||||||||||||||||||.||||||||.||.|||||.|||||.|||
RBAM_025320__ 101 ATGAGGTGACGTCTCCTCAGGCGTTTGAAGGGTTAAGACAGAAGGGGAGA 150
BSNT_04107___ 151 AAGGTCAGAAGACCCCAAAACACATTTGCGACAATGGACCACAACATCCC 200
|||||||||.|.||.||.||.|||||.|||||.|||||||||||.||.||
RBAM_025320__ 151 AAGGTCAGACGGCCGCAGAATACATTCGCGACGATGGACCACAATATTCC 200
BSNT_04107___ 201 GACTGTCAATCGTTTTGAGATAAAGGATGAAGTTGCGAAACGCCAGGTAA 250
|||.|||||.||||||||.||.||.||||||||.||.||.|||||.||||
RBAM_025320__ 201 GACCGTCAACCGTTTTGACATTAAAGATGAAGTCGCAAAGCGCCAAGTAA 250
BSNT_04107___ 251 CGGCGCTTGAAAGAAACTGTGAGGAATTTGGCGTGCGCCTTGCCGATCTT 300
|.|||||||||.|.||.||||||||.||||||||.||.|||||.||||||
RBAM_025320__ 251 CCGCGCTTGAACGGAATTGTGAGGAGTTTGGCGTCCGTCTTGCGGATCTT 300
BSNT_04107___ 301 CACAGTGTGGATCAAGGGATTGTCCATGTCGTCGGACCTGAACTGGGCTT 350
|||||.|..||.||.|||||.||.||.||.|||||.|||||.||.||..|
RBAM_025320__ 301 CACAGCGCAGACCAGGGGATCGTTCACGTAGTCGGGCCTGAGCTTGGTCT 350
BSNT_04107___ 351 AACGCTTCCAGGGAAAACGATTGTGTGCGGGGACAGTCATACATCAACAC 400
.||.|||||.|||||||||||.||.|||||.|||||.||||||||.||.|
RBAM_025320__ 351 GACACTTCCGGGGAAAACGATCGTTTGCGGAGACAGCCATACATCGACTC 400
BSNT_04107___ 401 ATGGTGCTTTCGGCGCTCTTGCATTTGGGATCGGGACGAGTGAAGTTGAA 450
|.|||||.|||||.||.|||||.||.||.|||||.||.|||||.||.|||
RBAM_025320__ 401 ACGGTGCATTCGGGGCGCTTGCCTTCGGTATCGGCACAAGTGAGGTGGAA 450
BSNT_04107___ 451 CATGTCCTTTCCACACAGACACTTTGGCAGCAGCGTCCAAAAACACTTGA 500
|||||.||||||||.||||||.|.|||||||||||.||.|||||.|||||
RBAM_025320__ 451 CATGTTCTTTCCACTCAGACATTGTGGCAGCAGCGGCCGAAAACGCTTGA 500
BSNT_04107___ 501 AGTGCGCGTAGATGGAACGCTTCAAAAAGGGGTAACGGCAAAGGATGTCA 550
|.|.|||||.||.||||||||.||||||||.||.||.||.||||||||||
RBAM_025320__ 501 AATCCGCGTTGACGGAACGCTCCAAAAAGGAGTGACCGCGAAGGATGTCA 550
BSNT_04107___ 551 TCCTTG-CTGTCATCGGCAAATACGGTGTGAAATTCGGCACAGGCTACGT 599
| |||| |.||||||||.||||||||.|||||||||||.||.||.||.||
RBAM_025320__ 551 T-CTTGTCGGTCATCGGAAAATACGGGGTGAAATTCGGTACCGGATATGT 599
BSNT_04107___ 600 CATTGAATACACTGGGGAAGTATTCAGAAATATGACGATGGATGAACGAA 649
||||||||||||.|||||||||||||||||.|||.|.|||||.|||||.|
RBAM_025320__ 600 CATTGAATACACCGGGGAAGTATTCAGAAACATGTCTATGGACGAACGCA 649
BSNT_04107___ 650 TGACTGTTTGTAACATGTCAATTGAAGCAGGAGCAAGAGCAGGTTTGATT 699
||||.||.||.||.|||||.||.|||||.|||||..|.||.||..||||.
RBAM_025320__ 650 TGACCGTCTGCAATATGTCGATAGAAGCGGGAGCGCGGGCGGGACTGATC 699
BSNT_04107___ 700 GCACCTGACGAGGTGACGTTTGAATATTGCAAAAATCGCAAGTACACGCC 749
||.||.||.||...||||.||||||||||.|||||.||.||.|||.||||
RBAM_025320__ 700 GCTCCGGATGACACGACGATTGAATATTGTAAAAACCGTAAATACGCGCC 749
BSNT_04107___ 750 AAAAGGCGAAGAATTTGACAAGGCCGTAGAGGAATGGAAGGCGCTGCGCA 799
|||||||||.||||||||.||.||||..|..||||||||.|||.|....|
RBAM_025320__ 750 AAAAGGCGAGGAATTTGAAAAAGCCGCCGCAGAATGGAAAGCGTTAAAAA 799
BSNT_04107___ 800 CAGACCCGGGCGCTGTTTACGATAAATCTATCGTCCTTGACGGCAACAAA 849
|.||.||||||||.||.||||||.|.||.|||||..|.|||||||.|.|.
RBAM_025320__ 800 CCGATCCGGGCGCCGTATACGATCATTCCATCGTGTTAGACGGCAGCGAG 849
BSNT_04107___ 850 ATTTCCCCTATGGTGACATGGGGCATTAACCCTGGAATGGTTCTTCCTGT 899
|||||.||.|||||.|||||||||.|.||.||.||.|||||||||||.||
RBAM_025320__ 850 ATTTCTCCAATGGTAACATGGGGCGTCAATCCCGGCATGGTTCTTCCGGT 899
BSNT_04107___ 900 CGATTCTGAAGTTCCTGCGCCGGAAA-GCTT--TTCTGCAGAAGATGATA 946
||||.|..||.|.||.|||||||||| |.|| |||| |||||.|.||
RBAM_025320__ 900 CGATGCCCAAATACCGGCGCCGGAAACGATTGATTCT---GAAGACGGTA 946
BSNT_04107___ 947 AAAAAGAAGCGATTCGCGCTTATGAATATATGGGACTGACTCCTCATCAG 996
||||||||||.||.|||||.||.|||||.||||||.|..|.||..||||.
RBAM_025320__ 947 AAAAAGAAGCCATCCGCGCGTACGAATACATGGGAATCTCACCGAATCAA 996
BSNT_04107___ 997 AAAATTGAAGACATTAAAGTGGAGCACGTATTTATCGGTTCCTGCACAAA 1046
|||||||||||.||||||||.|||||.||.||||||||.|||||.|||||
RBAM_025320__ 997 AAAATTGAAGATATTAAAGTCGAGCATGTGTTTATCGGCTCCTGTACAAA 1046
BSNT_04107___ 1047 TTCCCGCATGACTGACCTTCGACAGGCTGCTGACATGATCAAAGG--GAA 1094
|||.||.|||||.||.|||||.||||||||.||.||||||||||| ||
RBAM_025320__ 1047 TTCGCGGATGACCGATCTTCGCCAGGCTGCGGATATGATCAAAGGCCGA- 1095
BSNT_04107___ 1095 GAAGGTAGCTGACAGCGTAAGGGCCATCGTCGTGCCCGGATCCCAAAGCG 1144
||.||.|||||||||||.||.|||||.||.||.||.||.||.|||||||
RBAM_025320__ 1096 -AAAGTCGCTGACAGCGTCAGAGCCATTGTGGTCCCGGGTTCTCAAAGCG 1144
BSNT_04107___ 1145 TGAAGCTTCAGGCTGAAAAAGAAGGGCTTGACC-AGATTTTCTTGGAAGC 1193
||||.|..|||||.|||.||||||||||..||| .|..|||| |.||.||
RBAM_025320__ 1145 TGAAACAGCAGGCCGAAGAAGAAGGGCTGCACCGCGTGTTTC-TCGAGGC 1193
BSNT_04107___ 1194 TGGATTTGAATGGAGAGAGTCAGGCTGCAGCATGTGTTTGAGTATGAATA 1243
.|||||||||||||||||.|||||||||||||||||..|.||||||||.|
RBAM_025320__ 1194 CGGATTTGAATGGAGAGAATCAGGCTGCAGCATGTGCCTCAGTATGAACA 1243
BSNT_04107___ 1244 ATGATGTTGTTCCTGAGGGAGAGCGCTGTGCATCAACCTCTAACCGCAAC 1293
|||||||.||.|||||.||.||.||.||.||.||.||.||.|||||||||
RBAM_025320__ 1244 ATGATGTCGTGCCTGAAGGGGAACGATGCGCTTCCACTTCCAACCGCAAC 1293
BSNT_04107___ 1294 TTCGAGGGCAGACAAGGAAAAGGTGCAAGAACACATCTCGTCAGCCCGGC 1343
|||||.||||||||.||||||||.||.||||||||.||.|||||.|||||
RBAM_025320__ 1294 TTCGAAGGCAGACAGGGAAAAGGCGCGAGAACACACCTTGTCAGTCCGGC 1343
BSNT_04107___ 1344 GATGGCTGCGATGGCTGCCATTCACGGACACTTCGTTGATGTCAGAAAGT 1393
||||||.||.|||||.|||||||||||.||.|||||.|||||.|||||||
RBAM_025320__ 1344 GATGGCGGCAATGGCAGCCATTCACGGGCATTTCGTCGATGTAAGAAAGT 1393
BSNT_04107___ 1394 TTTATCAGGAAAAAACAGTTGTGTAA 1419
|||||||.||||||||||||||||||
RBAM_025320__ 1394 TTTATCAAGAAAAAACAGTTGTGTAA 1419
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