Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04094 and RBAM_025230
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:27
# Commandline: needle
# -asequence dna-align/BSNT_04094___hemA.1.9828.seq
# -bsequence dna-align/RBAM_025230___hemA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04094___hemA-RBAM_025230___hemA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04094___hemA-RBAM_025230___hemA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04094___hemA
# 2: RBAM_025230___hemA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1385
# Identity: 1102/1385 (79.6%)
# Similarity: 1102/1385 (79.6%)
# Gaps: 25/1385 ( 1.8%)
# Score: 4365.5
#
#
#=======================================
BSNT_04094___ 1 ---------ATGCATATACTTGTTGTGGGAGTAGATTATAAATCCGCCCC 41
||||||||.||||||||||||||||||||||||||||||||
RBAM_025230__ 1 ATGAAAGCGATGCATATTCTTGTTGTGGGAGTAGATTATAAATCCGCCCC 50
BSNT_04094___ 42 TATTGAGATACGTGAAAAAGTAAGTTTTCAGCCGAATGAGCTGGCGGAAG 91
||||||.|||||.||||||.||||||||||||||.|||||||.||.||||
RBAM_025230__ 51 TATTGAAATACGCGAAAAAATAAGTTTTCAGCCGGATGAGCTTGCAGAAG 100
BSNT_04094___ 92 CAATGGTGCAGCTGAAAGAAGAGAAAAGCATTCTTGAAAACATCATTGTC 141
|.|||.|.|...|.||||.|||.|||||..|||||||||||||.||.||.
RBAM_025230__ 101 CGATGCTCCGTTTAAAAGGAGAAAAAAGTGTTCTTGAAAACATTATCGTG 150
BSNT_04094___ 142 TCAACCTGCAACCGCACTGAAATTTATGCGGTAGTCGACCAGCTCCATAC 191
|||||||||||||||||.|||||.||||||||.|||||||||||.|||||
RBAM_025230__ 151 TCAACCTGCAACCGCACCGAAATATATGCGGTGGTCGACCAGCTTCATAC 200
BSNT_04094___ 192 CGGCCGTTATTATATAAAAAAGTTTTTAGCTGATTGGTT-TCAATTAAGC 240
||||||||||||||||||.|..||||||.|.||.||||| ||..| ||
RBAM_025230__ 201 CGGCCGTTATTATATAAAGACATTTTTATCCGAATGGTTCTCGCT---GC 247
BSNT_04094___ 241 --AAAGAAGAGCTGTCACCG-TTCTTAACGTTTTATGAGAGCGATGCCGC 287
||||||||||||||.||| ||||.|| .||||||||||||||.||.||
RBAM_025230__ 248 CGAAAGAAGAGCTGTCTCCGTTTCTGAA-ATTTTATGAGAGCGACGCGGC 296
BSNT_04094___ 288 TGTTGAGCATTTATTCCGTGTAGCCTGCGGACTT-GACTCTATGGTGATT 336
..|.|||||||||||||||||.||.||||| ||| ||.||.|||||.||.
RBAM_025230__ 297 GATCGAGCATTTATTCCGTGTGGCGTGCGG-CTTGGATTCCATGGTCATC 345
BSNT_04094___ 337 GGCGAAACGCAGATTCTCGGACAGGTACGCGACAGCTTTAAAACAGCTCA 386
||.||||||||.||.|||||.|||||.|||...|||||||||||.||.||
RBAM_025230__ 346 GGAGAAACGCAAATACTCGGCCAGGTCCGCTCAAGCTTTAAAACGGCGCA 395
BSNT_04094___ 387 GCAAGAAAAAACGATCGGGACTATTTTTAATGAGCTGTTTAAGCAGGCGG 436
|..||||||.||||||||.||.|||||.||||||||||||||.|||||||
RBAM_025230__ 396 GGCAGAAAAGACGATCGGCACCATTTTCAATGAGCTGTTTAAACAGGCGG 445
BSNT_04094___ 437 TTACAGTGGGCAAACGGACTCACGCAGAAACAGACATTGGCTCAAATGCG 486
|.||.||.||||||||.||.||.||.|||||.||.||.|||.|.|||||.
RBAM_025230__ 446 TGACCGTCGGCAAACGCACGCATGCCGAAACCGATATCGGCGCCAATGCC 495
BSNT_04094___ 487 GTGTCAGTAAGCTATGCTGCAGTTGAACTTGCCAAAAAAATCTTCGGAAA 536
||.||.||.||.||.||.||.||||||||.||.|||||||||||||| .
RBAM_025230__ 496 GTTTCCGTCAGTTACGCCGCCGTTGAACTCGCGAAAAAAATCTTCGG--C 543
BSNT_04094___ 537 TC--TTTCAAGCAAGCACATATTGATTCTCGGTGCGGGAAAAATGGGCGA 584
|| |.||||..||||||||.|||||||||||||||||||||||||||||
RBAM_025230__ 544 TCATTGTCAAATAAGCACATTTTGATTCTCGGTGCGGGAAAAATGGGCGA 593
BSNT_04094___ 585 GCTTGCTGCGGAAAACCTGCACGGACAGGGAATCGGCAAGGTCACTGTCA 634
|||.||.||.||||||||||||||.|||||.||||||||.||.||.||||
RBAM_025230__ 594 GCTCGCCGCAGAAAACCTGCACGGTCAGGGCATCGGCAAAGTAACGGTCA 643
BSNT_04094___ 635 TTAACCGAACGTACTTGAAAGCGAAGGAGCTTGCAGACCGTTTCTCAGGT 684
|.|||.||||||..|||||.||.||.|.||||||.|||||||||||.||.
RBAM_025230__ 644 TCAACAGAACGTTTTTGAAGGCAAAAGCGCTTGCTGACCGTTTCTCCGGA 693
BSNT_04094___ 685 GAAGCGAGAAGCTTGAATCAGCTTGAAAGCGCGCTTGCGGAGGCTGATAT 734
||||||.|.|||||.||.|||||||||...||.|||||.||.||||||||
RBAM_025230__ 694 GAAGCGCGCAGCTTAAACCAGCTTGAACATGCACTTGCTGAAGCTGATAT 743
BSNT_04094___ 735 TTTAATCAGTTCAACCGGTGCAAGTGAATTTGTCGTGTCCAAAGAGATGA 784
||||||||||||.||.||.||||||||.||.||||||||.|||||.||||
RBAM_025230__ 744 TTTAATCAGTTCGACAGGCGCAAGTGATTTCGTCGTGTCTAAAGAAATGA 793
BSNT_04094___ 785 TGGAAAACGCGAATAAGCTTCGCAAGGGACGTCCGCTGTTTATGGTCGAC 834
||||.|..|||...|..|..||.||.||.||.|||.|.||||||||.||.
RBAM_025230__ 794 TGGAGAGAGCGGGCAGACAGCGGAAAGGCCGCCCGTTATTTATGGTGGAT 843
BSNT_04094___ 835 ATTGCCGTGCCTAGAGATCTTGATCCGGCGCTGAATGATCTTGAAGGTGT 884
||.||.|||||.||.||.||.||||||||||||||.||||||||||||||
RBAM_025230__ 844 ATCGCTGTGCCGAGGGACCTCGATCCGGCGCTGAACGATCTTGAAGGTGT 893
BSNT_04094___ 885 TTTTCTTTATGATATCGACGATCTGGAAGGCATTGTAGAAGCGAACATGA 934
||||||.||.|||||.||.||.||.|||||.||.||.|||||.|||.|..
RBAM_025230__ 894 TTTTCTGTACGATATTGATGACCTTGAAGGAATCGTTGAAGCCAACTTAC 943
BSNT_04094___ 935 AAGAGCGGAGAGAAACAGCTGAAAAAGTTGAACTGTTAATTGAAGAAACC 984
||||.||..|.|||||.|||||||||||.||.|||||.|||||||...|.
RBAM_025230__ 944 AAGAACGCCGTGAAACCGCTGAAAAAGTCGAGCTGTTTATTGAAGCGGCA 993
BSNT_04094___ 985 ATTGTGGAATTTAAACAATGGATGAATACACTTGGTGTTGTGCCGGTTAT 1034
|||||.||.|||||.||.|||.|.|||||.||.||.||.||||||||.||
RBAM_025230__ 994 ATTGTTGAGTTTAAGCAGTGGCTTAATACGCTCGGCGTCGTGCCGGTCAT 1043
BSNT_04094___ 1035 TTCTGCATTGCGCGAAAAGGCGCTTGCCATCCAGTCAGAAACGATGGACA 1084
|||.||..||||.|||||||||||..||||||||||.||.||||||.|.|
RBAM_025230__ 1044 TTCGGCGCTGCGTGAAAAGGCGCTGTCCATCCAGTCCGATACGATGCAGA 1093
BSNT_04094___ 1085 GCATTGAGCGTAAGCTGCCTCA-CTTAAGCACAAGAGAGAAAAAACTGTT 1133
||||||||||.||||||||||| ||.|.| ..|||||||||||||||..|
RBAM_025230__ 1094 GCATTGAGCGCAAGCTGCCTCATCTGACG-GTAAGAGAGAAAAAACTTCT 1142
BSNT_04094___ 1134 GAACAAACACACCAAAAGTATTATTAACCAAATGCTTCGTGATCCGATTT 1183
.|.||||||.||.|||||.||.||||||||||||||.||.||.||||||.
RBAM_025230__ 1143 CAGCAAACATACGAAAAGCATCATTAACCAAATGCTGCGCGACCCGATTC 1192
BSNT_04094___ 1184 TAAAGGTGAAAGAGCTTGCGGCAGATGCTGATTCTGAAGAAAAGCTCGCG 1233
|.||.|.|||||||||||||||.||.||.|||||.|||||||||||...|
RBAM_025230__ 1193 TGAAAGCGAAAGAGCTTGCGGCTGAAGCGGATTCGGAAGAAAAGCTGAAG 1242
BSNT_04094___ 1234 TTGTTTATGCAGATTTTTGATATTGAAGAAGCTGCGGGCCGTCAAATGAT 1283
.||||||||||.||.||.||||||||.||||..||.|||||.||..||..
RBAM_025230__ 1243 CTGTTTATGCAAATATTCGATATTGAGGAAGAGGCCGGCCGCCAGCTGGA 1292
BSNT_04094___ 1284 GAAAACCGTTGAAAGCAGCCAGAAGGTCCACTCTTTTAAGAAGGCTGAAT 1333
.||||.|.|.||.|.|.||||||.|||.||.||.|||.|.|||||.|||.
RBAM_025230__ 1293 CAAAAGCCTGGATAACCGCCAGACGGTTCATTCGTTTCAAAAGGCAGAAG 1342
BSNT_04094___ 1334 CAAAAGCGGGCTTTAGCCCACTTGTAAGTGAGTGA 1368
|||||.|||||||..|.||.|||||||||||||||
RBAM_025230__ 1343 CAAAAACGGGCTTACGTCCGCTTGTAAGTGAGTGA 1377
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