Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04087 and RBAM_025180
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:27
# Commandline: needle
# -asequence dna-align/BSNT_04087___hemL.1.9828.seq
# -bsequence dna-align/RBAM_025180___hemL.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04087___hemL-RBAM_025180___hemL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04087___hemL-RBAM_025180___hemL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04087___hemL
# 2: RBAM_025180___hemL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1297
# Identity: 1041/1297 (80.3%)
# Similarity: 1041/1297 (80.3%)
# Gaps: 11/1297 ( 0.8%)
# Score: 4164.0
#
#
#=======================================
BSNT_04087___ 1 ATGAGAAGCTATGAAAAATCAAAAACGGCTTTTAAAGAAGCGCAAAAACT 50
||||||||||||||||||||||||.|.|||||||||||||||||.|||||
RBAM_025180__ 1 ATGAGAAGCTATGAAAAATCAAAAGCCGCTTTTAAAGAAGCGCAGAAACT 50
BSNT_04087___ 51 CATGCCGGGCGGTGTGAACAGTCCCGTTCGCGCATTTAAATCGGTAGACA 100
.|||||||||||.||||||||.||.||.|||||.||||||||.||.||.|
RBAM_025180__ 51 GATGCCGGGCGGAGTGAACAGCCCAGTGCGCGCGTTTAAATCAGTCGATA 100
BSNT_04087___ 101 TGGACCCGATTTTTATGGAGCGCGGAAAAGGCTCGAAAATCTTTGATATT 150
||||||||||.||||||.|||||||||||||.||||||||.|||||||||
RBAM_025180__ 101 TGGACCCGATCTTTATGCAGCGCGGAAAAGGATCGAAAATTTTTGATATT 150
BSNT_04087___ 151 GACGGGAATGAATATATTGACTACGTCTTGTCATGGGGGCCTTTAATTTT 200
|||||.|||||||||||.|||||||||.||...||||||||..|.|||||
RBAM_025180__ 151 GACGGCAATGAATATATCGACTACGTCCTGAGCTGGGGGCCGCTCATTTT 200
BSNT_04087___ 201 AGGGCATACAAATGACCGCGTCGTAGAAAGCCTCAAAAAAGTGGCTGAAT 250
.||.||.||.||.|||||.|||||.||||||||.||||||||.||.||..
RBAM_025180__ 201 GGGCCACACGAACGACCGGGTCGTTGAAAGCCTGAAAAAAGTAGCCGAGA 250
BSNT_04087___ 251 ACGGGACAAGCTTTGGTGCTCCGACTGAAGTAGAAAATGAACTGGCTAAG 300
||||||||||.||.||.||..|.||||||||.|||||.||||||||.||.
RBAM_025180__ 251 ACGGGACAAGTTTCGGGGCATCTACTGAAGTGGAAAACGAACTGGCCAAA 300
BSNT_04087___ 301 CTCGTCATTGATCGTGTGCCATCTGTAGAAATTGTACGAATGGTAAGCTC 350
.|.||||||||.||||||||.|||||.|||||.||.||.|||||.|||||
RBAM_025180__ 301 TTGGTCATTGACCGTGTGCCGTCTGTTGAAATCGTGCGGATGGTCAGCTC 350
BSNT_04087___ 351 CGGAACAGAGGCTACAATGAGTGCCCTCCGTTTGGCAAGGGGCTATACGG 400
|||.||||||||.||||||||.|||||.|||.|||||||.||.|||||.|
RBAM_025180__ 351 CGGCACAGAGGCGACAATGAGCGCCCTGCGTCTGGCAAGAGGATATACCG 400
BSNT_04087___ 401 GCCGCAACAAGATTTTAAAATTTGAGGGCTGCTACCACGGACACGGCGAT 450
||||.|||||.|||||.|||||.||.|||||.||||||||.||.||.|||
RBAM_025180__ 401 GCCGAAACAAAATTTTGAAATTCGAAGGCTGTTACCACGGCCATGGTGAT 450
BSNT_04087___ 451 TCTCTCTTGATTAAAGCTGGTTCAGGTGTTGCCACTCTCGGTCTGCCTGA 500
||.||..||||.|||||.||.||.||.||.||.||.|||||.||.||.||
RBAM_025180__ 451 TCACTGCTGATCAAAGCGGGATCCGGAGTGGCGACACTCGGCCTTCCGGA 500
BSNT_04087___ 501 CAGCCCGGGGGTGCCTGAAGGCATTGCGAAAAACACCATCACCGTTCCGT 550
|||||||||.|||||.|||||.||.||.|..||.||.||.||||||||.|
RBAM_025180__ 501 CAGCCCGGGCGTGCCGGAAGGAATAGCAATGAATACGATTACCGTTCCAT 550
BSNT_04087___ 551 ACAATGATTTAGAAAGTGTAAAGCTTGCTTTCCAGCAATTCGGTGAAGAC 600
||||.||.||.|||||.||....||.||.||||.|.|.|.|||||||||.
RBAM_025180__ 551 ACAACGACTTGGAAAGCGTTGCACTCGCATTCCGGGAGTACGGTGAAGAT 600
BSNT_04087___ 601 ATTGCGGGAGTCATTGTAGAGCCAGTTGCCGGAAATATGGGTGTTGTTCC 650
|||||.||.||||||||.||.||.||.||.||.||||||||.||||||||
RBAM_025180__ 601 ATTGCCGGGGTCATTGTTGAACCGGTAGCAGGCAATATGGGCGTTGTTCC 650
BSNT_04087___ 651 GCCGCAAGAAGGCTTCCTGCAGGGTCTGCGTGATATCACTGAGCAGTACG 700
||||||.||||||||..|.||.||.||.||.||.||.||.||.|||||.|
RBAM_025180__ 651 GCCGCAGGAAGGCTTTTTACAAGGACTTCGCGACATGACGGAACAGTATG 700
BSNT_04087___ 701 GCTCCCTGCTGATTTTTGATGAGGTGATGACAGGCTTCCGGGTCGATTAT 750
||.|.|||||.||||||||||||||.|||||.||.||.||.||.||||||
RBAM_025180__ 701 GCGCGCTGCTCATTTTTGATGAGGTCATGACCGGTTTTCGCGTGGATTAT 750
BSNT_04087___ 751 AACTGCGCTCAAGGTTACTTCGGCGTAACGCCTGATCTGACTTGTTTAGG 800
|||||.||.|||||.||.||||||||.||||||||..|.||.|||.|.||
RBAM_025180__ 751 AACTGTGCGCAAGGGTATTTCGGCGTGACGCCTGACTTAACGTGTCTCGG 800
BSNT_04087___ 801 AAAAGTAATCGGGGGCGGACTTCCTGTCGGCGCTTATGGCGGAAAGGCAG 850
.|||||.|||||.|||||.|||||||||||.||.|||||||||||.||.|
RBAM_025180__ 801 CAAAGTCATCGGCGGCGGTCTTCCTGTCGGTGCGTATGGCGGAAAAGCTG 850
BSNT_04087___ 851 AAATCATGGAGCAGATCGCTCCAAGCGGTCCGATCTATCAAGCTGGTACA 900
|.||.|||||.|..|||||.||.|||||||||||||||||.|||||.|||
RBAM_025180__ 851 ACATTATGGAACGAATCGCGCCGAGCGGTCCGATCTATCAGGCTGGAACA 900
BSNT_04087___ 901 TTGTCAGGCAACCCGCTTGCGATGACGGCTGG-CTTAGAGACATTGAAAC 949
||||||||.||.||||||||.|||||.||.|| ||| |||||.||..|.|
RBAM_025180__ 901 TTGTCAGGAAATCCGCTTGCCATGACAGCGGGACTT-GAGACGTTACAGC 949
BSNT_04087___ 950 AGCTGACACCTGAATCCTA-CAAGAATTTCATCAAAAAAGGCGACAGGCT 998
||||.|||||||||||.|| ||||||||| .|.|||||||||||.|.|||
RBAM_025180__ 950 AGCTCACACCTGAATCTTACCAAGAATTT-GTGAAAAAAGGCGATATGCT 998
BSNT_04087___ 999 GGAAGAAGGAATTTCAAAAGCCGCCGAGGCTCATGGTATTCCGCATACCT 1048
.||||||||.|||||||||||.||.|..||.|||||.||||||||.||.|
RBAM_025180__ 999 TGAAGAAGGCATTTCAAAAGCAGCTGCAGCACATGGCATTCCGCACACGT 1048
BSNT_04087___ 1049 TTAACCGTGCAGGTTCGATGATCGGTTTCTTCTTTACTAACGAACCAGTC 1098
|||||||.||.|||||.||||||||.|||||.||.||.||.||.||.|||
RBAM_025180__ 1049 TTAACCGGGCGGGTTCAATGATCGGCTTCTTTTTCACAAATGAGCCTGTC 1098
BSNT_04087___ 1099 ATTAATTATGGAACAGCGAAATCATCTGATTTGAAGCTGTTCGCAAGCTA 1148
|||||.||||.|.||||.||||||||||||||.|||||||||||.|..||
RBAM_025180__ 1099 ATTAACTATGAAGCAGCCAAATCATCTGATTTAAAGCTGTTCGCTAAATA 1148
BSNT_04087___ 1149 TTATAAAGGGATGGCAAATGAAGGGGTATTCCTTCCGCCATCACAATTCG 1198
|||||||||||||||..|.|.|||.|||||.||.|||||.||.|||||.|
RBAM_025180__ 1149 TTATAAAGGGATGGCTGACGCAGGCGTATTTCTGCCGCCGTCTCAATTTG 1198
BSNT_04087___ 1199 AAGGTCTTTTCCTCTCAACGGCCCATAC--TGATGAAGATATTGAAAACA 1246
||||..|.||.|||||.||.||.||||| || ||.|||||||||||.|
RBAM_025180__ 1199 AAGGATTGTTTCTCTCCACTGCGCATACAATG--GAGGATATTGAAAATA 1246
BSNT_04087___ 1247 CAATCCAGGCAGCTGAGAAAGTATTTGCTGAGATCAGCCGCAGATAA 1293
|.||.||.||.|||||||||||.||....|.||||||||||.||
RBAM_025180__ 1247 CCATTCAAGCCGCTGAGAAAGTGTTCCAGGCGATCAGCCGCTGA--- 1290
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