Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04080 and RBAM_025140
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########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:26
# Commandline: needle
# -asequence dna-align/BSNT_04080___valS.1.9828.seq
# -bsequence dna-align/RBAM_025140___valS.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04080___valS-RBAM_025140___valS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04080___valS-RBAM_025140___valS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04080___valS
# 2: RBAM_025140___valS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2648
# Identity: 2175/2648 (82.1%)
# Similarity: 2175/2648 (82.1%)
# Gaps: 10/2648 ( 0.4%)
# Score: 8961.0
#
#
#=======================================
BSNT_04080___ 1 ATGGAAACGAATGAACAAACAATGCCGACGAAATATGATCCGGCAGCGGT 50
|||||.||.||||||||||||||||||||.||||||||||||.|.|||.|
RBAM_025140__ 1 ATGGATACAAATGAACAAACAATGCCGACAAAATATGATCCGTCTGCGAT 50
BSNT_04080___ 51 TGAAAAAGACCGATATGATTTTTGGCTAAAAGGCAAATTTTTTGAAGCGG 100
||||||||.|||.||||||||||||||.|||||.||||.|||||||||||
RBAM_025140__ 51 TGAAAAAGGCCGCTATGATTTTTGGCTGAAAGGAAAATATTTTGAAGCGG 100
BSNT_04080___ 101 GCAGTGACCAGACAAAAGAGCCATACTCTGTTGTCATCCCGCCGCCAAAC 150
||.|.||.||.||.|||.||||.||.|||||.|||||.||||||||.|||
RBAM_025140__ 101 GCGGCGATCAAACGAAACAGCCGTATTCTGTCGTCATTCCGCCGCCGAAC 150
BSNT_04080___ 151 GTAACAGGAAGACTTCACCTTGGCCACGCATGGGACACAACGCTGCAAGA 200
||.||.||.||.||.|||||.||.||.||.|||||.||.|||||||||||
RBAM_025140__ 151 GTGACGGGCAGGCTGCACCTCGGACATGCGTGGGATACGACGCTGCAAGA 200
BSNT_04080___ 201 CATTGTAACAAGAATGAAACGCATGCAGGGCTATGATGTGCTGTGGCTTC 250
.||.||.||..|.|||||||||||||||||||||||.|||||.|||||||
RBAM_025140__ 201 TATCGTTACGCGTATGAAACGCATGCAGGGCTATGACGTGCTCTGGCTTC 250
BSNT_04080___ 251 CAGGCATGGACCATGCCGGCATCGCAACACAGGCTAAAGTGGAGGCGAAA 300
|.|||||||||||.|||||||||||.||.|||||.|||||.||.|||||.
RBAM_025140__ 251 CGGGCATGGACCACGCCGGCATCGCCACTCAGGCAAAAGTCGAAGCGAAG 300
BSNT_04080___ 301 CTTCGTGAAGAAGGCAAATCCCGCTACGATTTAGGCCGTGAAAAATTCCT 350
||.||.|||.|.||||.|..|||.||.||..|.|||||||||||.||..|
RBAM_025140__ 301 CTCCGCGAACAGGGCACAAGCCGTTATGACCTCGGCCGTGAAAAGTTTTT 350
BSNT_04080___ 351 CGAAGAAACGTGGAAGTGGAAGGAAGAATATGCTGACTTTATTCGCAGCC 400
.||||||||||||||||||||||||||.||||||||.||.||.|||||||
RBAM_025140__ 351 AGAAGAAACGTGGAAGTGGAAGGAAGAGTATGCTGATTTCATCCGCAGCC 400
BSNT_04080___ 401 AGTGGGCGAAATTAGGTCTTGGCCTAGATTATTCCCGTGAACGTTTTACG 450
|.|||||.||..|.||.||.||.||.||||||||.||.|||||||||||.
RBAM_025140__ 401 AATGGGCTAAGATGGGACTCGGACTCGATTATTCACGCGAACGTTTTACT 450
BSNT_04080___ 451 CTGGATGAAGGCTTGAGCAAAGCGGTAAGAGAAGTATTCGTTAAGCTTTA 500
||.||||||||..|||.||||||.||..|.|||||||||||.|||||.||
RBAM_025140__ 451 CTTGATGAAGGGCTGAACAAAGCCGTGCGGGAAGTATTCGTCAAGCTGTA 500
BSNT_04080___ 501 TGAAAAAGGCCTGATCTACAGAGGCGAATATATTATTAACTGGGACCCAG 550
..||||||||.||||.|||||||||||||||||.||.|||||||||||.|
RBAM_025140__ 501 CAAAAAAGGCTTGATTTACAGAGGCGAATATATCATCAACTGGGACCCTG 550
BSNT_04080___ 551 CGACAAAAACAGCCCTATCCGACATTGAGGTGATTTACAAGGATGTTCAA 600
|.||||||||.||..|||||||.|||||.|||||||||||.||.||.||.
RBAM_025140__ 551 CCACAAAAACGGCTTTATCCGATATTGAAGTGATTTACAAAGACGTACAG 600
BSNT_04080___ 601 GGCGCGTTCTATCATATGAGCTATCCGCTTGCTGACGGTTCAGGCTCAAT 650
||||||||.||||||.||.||||||||.|.||.|||||||||||||||||
RBAM_025140__ 601 GGCGCGTTTTATCATTTGCGCTATCCGTTAGCAGACGGTTCAGGCTCAAT 650
BSNT_04080___ 651 TGAAATTGCGACGACACGTCCTGAAACAATGCTCGGTGATACAGCTGTTG 700
||||||.|||||.||.|||||.|||||||||||.||.||.||.|||||.|
RBAM_025140__ 651 TGAAATCGCGACCACCCGTCCGGAAACAATGCTTGGCGACACGGCTGTCG 700
BSNT_04080___ 701 CCGTTCACCCTGAAGACGAGCGCTATAAACACCTTATCGGAAAAACGGTG 750
|.|||||.||||||||.||||||||.||.|||.|.|||||.|||||||||
RBAM_025140__ 701 CGGTTCATCCTGAAGATGAGCGCTACAAGCACTTAATCGGCAAAACGGTG 750
BSNT_04080___ 751 ATCCTGCCGATTGTAAATCGTGAAATTCCGATTGTCGGTGATGACTATGT 800
||.|||||||||..|||.||||||||||||||||||||.|||||.|||||
RBAM_025140__ 751 ATTCTGCCGATTACAAACCGTGAAATTCCGATTGTCGGCGATGATTATGT 800
BSNT_04080___ 801 TGATATGGAATTTGGTTCAGGTGCCGTGAAAATTACGCCTGCTCATGATC 850
||||||||||||.||.|||||.|||||.|||||.||||||||.|||||.|
RBAM_025140__ 801 TGATATGGAATTCGGATCAGGCGCCGTTAAAATCACGCCTGCCCATGACC 850
BSNT_04080___ 851 CGAACGACTTCGAGCTTGGCAACCGCCACAATTTAGAACGCATTCTTGTC 900
||||.||.||.||.||.||.|||||||||||||||||.||.|||||.|||
RBAM_025140__ 851 CGAATGATTTTGAACTCGGAAACCGCCACAATTTAGAGCGGATTCTCGTC 900
BSNT_04080___ 901 ATGAATGAAGATGGCACGATGAATGAAAATGCTCTGCAATATCAAGGCAT 950
|||||||||||.||.||.|||||||||||.||.|||||||||.|.|||||
RBAM_025140__ 901 ATGAATGAAGACGGAACAATGAATGAAAAAGCGCTGCAATATAACGGCAT 950
BSNT_04080___ 951 GGATCGTTTTGAATGCCGCAAAAAGCTCGTGAAAGATTTACAGGAGGCGG 1000
|||.||.|||||||||||||||||.|||||.||||||.|.|||||..|.|
RBAM_025140__ 951 GGACCGGTTTGAATGCCGCAAAAAACTCGTCAAAGATCTTCAGGAATCCG 1000
BSNT_04080___ 1001 GAGTTCTCTTCAAGATCGAGGATCATATGCACTCTGTCGGCCATAGTGAA 1050
|.||||||||.||.|||||.||.||||||||.||||||||.||||||||.
RBAM_025140__ 1001 GTGTTCTCTTTAAAATCGAAGACCATATGCATTCTGTCGGACATAGTGAG 1050
BSNT_04080___ 1051 CGAAGCGGGGCTGTTGTGGAGCCTTATCTTTCTACACAATGGTTTGTGCG 1100
.|||||||.||.|||||.|||||.||.||.||.||||||||||||||...
RBAM_025140__ 1051 AGAAGCGGCGCCGTTGTTGAGCCGTACCTGTCCACACAATGGTTTGTCAA 1100
BSNT_04080___ 1101 CATGCAGCCGCTTGCTGATGCAGCGATTGAGCTGCAAAAGAAAGAAGA-A 1149
.|||||||||||.||.|||||.|||.||||.||.||....|||||||| |
RBAM_025140__ 1101 AATGCAGCCGCTGGCCGATGCTGCGGTTGACCTTCAGTCAAAAGAAGAGA 1150
BSNT_04080___ 1150 AAGGTCAACTTTGTGCCTGACCGTTTCGAAAAAACGTATTTACACTGGAT 1199
|||.|| ||||.||.||.|||||||||||.||||||||..|.||.|||||
RBAM_025140__ 1151 AAGTTC-ACTTCGTTCCAGACCGTTTCGAGAAAACGTACCTGCATTGGAT 1199
BSNT_04080___ 1200 GGAAAACATCCGCGACTGGTGTATCTCCCGTCAATTGTGGTGGGGCCATC 1249
||||||.|||||.||.||||||||.||||||||..|||||||||||||.|
RBAM_025140__ 1200 GGAAAATATCCGTGATTGGTGTATTTCCCGTCAGCTGTGGTGGGGCCACC 1249
BSNT_04080___ 1250 GTATTCCTGCCTGGTATCATAAAGAAACAGGCGAGCTATATGTCGGGCTT 1299
|.||.||.||.||||||||||||||||||...||..|.||.|||||.|||
RBAM_025140__ 1250 GCATCCCGGCTTGGTATCATAAAGAAACAAAAGAAGTGTACGTCGGCCTT 1299
BSNT_04080___ 1300 GAAGCGCCGGAAGACAGCGAAAATTGGGAACAGGATACAGACGTACTGGA 1349
||.|||||.||.|||||.||.|||||||||||||||.|||||||.||.||
RBAM_025140__ 1300 GAGGCGCCTGAGGACAGTGAGAATTGGGAACAGGATTCAGACGTGCTTGA 1349
BSNT_04080___ 1350 TACATGGTTCAGTTCTGCGCTATGGCCTTTCTCCACAATGGGCTGGCCTG 1399
||||||||||||.||.|||||.|||||.||.||.||||||||||||||||
RBAM_025140__ 1350 TACATGGTTCAGCTCCGCGCTTTGGCCGTTTTCTACAATGGGCTGGCCTG 1399
BSNT_04080___ 1400 ATGTAACGGCTGAAGACTTTAAACGCTACTATCCGACAGATGTTCTCGTG 1449
|||.||..||||||||||||||.||.||.||..|.||.||||||||.||.
RBAM_025140__ 1400 ATGAAAACGCTGAAGACTTTAAGCGGTATTACTCAACCGATGTTCTTGTA 1449
BSNT_04080___ 1450 ACAGGGTACGATATCATTTTCTTCTGGGTATCACGCATGATTTTCCAAGG 1499
||.||.||.||.||||||||||||||||||||.||.||||||||||||||
RBAM_025140__ 1450 ACGGGATATGACATCATTTTCTTCTGGGTATCCCGGATGATTTTCCAAGG 1499
BSNT_04080___ 1500 CATTGAATTTACAGGCGAGCGCCCGTTCAAAGATGTTTTAATCCACGGCT 1549
..||||.|||||.||||||||.|||||||||||.||..|.||.|||||||
RBAM_025140__ 1500 TCTTGAGTTTACCGGCGAGCGTCCGTTCAAAGACGTGCTGATTCACGGCT 1549
BSNT_04080___ 1550 TAATCCGTGACGAGCAAGGCCGGAAAATGAGTAAATCTCTTGGCAACGGT 1599
||||||||||||||||.|||.|.||||||||||||||.|||||.|||||.
RBAM_025140__ 1550 TAATCCGTGACGAGCAGGGCAGAAAAATGAGTAAATCCCTTGGGAACGGC 1599
BSNT_04080___ 1600 GTCGACCCGATGGATGTGATTGACAAGTACGGAGCCGATTCTCTGCGTTA 1649
||.||||||||||||||.||.||||||||||||||.|||||.|||||.||
RBAM_025140__ 1600 GTGGACCCGATGGATGTCATCGACAAGTACGGAGCGGATTCCCTGCGCTA 1649
BSNT_04080___ 1650 TTTCCTTGCGACTGGAAGCTCTCCTGGCCAGGATCTGCGCTTCAGCTATG 1699
||||||.||.||.|||||.||.||.||.||||||||.||.||||||||||
RBAM_025140__ 1650 TTTCCTGGCAACCGGAAGTTCACCGGGACAGGATCTCCGTTTCAGCTATG 1699
BSNT_04080___ 1700 AAAAAGTGGAATCGACCTGGAATTTTGCCAATAAAATTTGGAACGCCTCC 1749
|||||||||||||.||.||||||||.||.|||||||||||||||||||||
RBAM_025140__ 1700 AAAAAGTGGAATCCACATGGAATTTCGCAAATAAAATTTGGAACGCCTCC 1749
BSNT_04080___ 1750 CGTTTTGCATTAATGAATATGGATGGCATGACGTACGATGAGCTTGATCT 1799
|||||||||||||||||.|||||.|||||||||||.||.|||||||||||
RBAM_025140__ 1750 CGTTTTGCATTAATGAACATGGACGGCATGACGTATGACGAGCTTGATCT 1799
BSNT_04080___ 1800 GTCAGGCGAAAAATCAGTCGCTGACAAGTGGATTTTAACGCGATTAAATG 1849
|||.||.|||||||||||.|||||.||||||||..|.||..||.|.||||
RBAM_025140__ 1800 GTCCGGTGAAAAATCAGTTGCTGATAAGTGGATCCTCACAAGACTGAATG 1849
BSNT_04080___ 1850 AAACGATCGAGCACGTGACCCAGCTTGCTGATCGATATGAATTTGGTGAA 1899
|||||||.||..||||.|||||||||||.|||||.||||||||.||||||
RBAM_025140__ 1850 AAACGATAGAAGACGTAACCCAGCTTGCGGATCGTTATGAATTCGGTGAA 1899
BSNT_04080___ 1900 GTAGGACGCCATTTATATAACTTTATTTGGGACGATTTCTGTGATTGGTA 1949
||.||||||||..|.||.||||||||.|||||||||.|.||.||.|||||
RBAM_025140__ 1900 GTCGGACGCCACCTGTACAACTTTATCTGGGACGATGTGTGCGACTGGTA 1949
BSNT_04080___ 1950 TATTGAAATGGCGAAGCTTCCGCTTTATGGGGAAGACGAAGCGGCTAAGA 1999
|||.||||||||||||||||||||.||.||||||||.||||||||.||||
RBAM_025140__ 1950 TATCGAAATGGCGAAGCTTCCGCTGTACGGGGAAGATGAAGCGGCGAAGA 1999
BSNT_04080___ 2000 AAACTACCCGTTCCATCCTTGCTTACGTACTTGATCAAACGATGCGTCTG 2049
||||.||||||||..|.||.||.|||||.|||||.||.|||||||||||.
RBAM_025140__ 2000 AAACAACCCGTTCTGTTCTGGCATACGTGCTTGACCAGACGATGCGTCTT 2049
BSNT_04080___ 2050 CTCCATCCGTTTATGCCATTCTTAACGGAGGAAATTTGGCAGCACCTTCC 2099
||.||.|||||||||||||||||||||||.|||||.||||||||||||||
RBAM_025140__ 2050 CTTCACCCGTTTATGCCATTCTTAACGGAAGAAATCTGGCAGCACCTTCC 2099
BSNT_04080___ 2100 TCACCAAGGGGAATCGATTACAGTAAG-TCAATGGCCTGTAGTAGTGCCG 2148
|||..||||.||.||.||.||..|.|| || .|||||.||....||||||
RBAM_025140__ 2100 TCATGAAGGCGAGTCAATCACGATCAGCTC-TTGGCCGGTTCCGGTGCCG 2148
BSNT_04080___ 2149 GAGCATACCGATACTGAAGCGACAGCTGACATGAAGCTTCTTGTTGAGCT 2198
||||||||.||||..||.||..|.||.||.|||||.||.||.|||||..|
RBAM_025140__ 2149 GAGCATACGGATAAAGAGGCAGCGGCGGATATGAAACTGCTCGTTGAATT 2198
BSNT_04080___ 2199 GATCCGTTCTGTGCGCAATATCCGCAGTGAAGTCAATACGCCAATGAGCA 2248
.|||||||||||.|||||||||||.||.||||||||.|||||.|||||||
RBAM_025140__ 2199 AATCCGTTCTGTCCGCAATATCCGGAGCGAAGTCAACACGCCGATGAGCA 2248
BSNT_04080___ 2249 AGCAGGTTGAACTGTACATTAAAACAAGCACAGACGAAATAGCAGCCCGC 2298
|||||||||||||.||||||||||||...||.||.||.||.||.|.||||
RBAM_025140__ 2249 AGCAGGTTGAACTTTACATTAAAACATCTACCGAAGACATTGCCGGCCGC 2298
BSNT_04080___ 2299 CTCGAGGCGAACCGTTCATATGTTGAACGCTTTACGAATCCGAGCGTGCT 2348
||.|||..|||||||||.||.||||||||||||||||||||||||..|||
RBAM_025140__ 2299 CTTGAGAAGAACCGTTCTTACGTTGAACGCTTTACGAATCCGAGCACGCT 2348
BSNT_04080___ 2349 TAAAATCGGCACCGATAT---TGAGGCTGTTGATAAGGCGATGACGGCCG 2395
.||||||||.||.||||| ||.||| .||.||.||||||||.||.|
RBAM_025140__ 2349 GAAAATCGGGACGGATATCACTGCGGC---AGACAAAGCGATGACAGCGG 2395
BSNT_04080___ 2396 TTGTCTCAGGAGCAGAGGTTATTCTTCCGCTTGAAGGCTTAATCAATATT 2445
|.|||.|.|||||.||.||.|||||.|||||||||||..|.||.||.|||
RBAM_025140__ 2396 TCGTCACCGGAGCGGAAGTCATTCTGCCGCTTGAAGGGCTGATTAACATT 2445
BSNT_04080___ 2446 GATGAAGAAATTGCCCGTCTGCAAAAAGAATTTGATAAACTGACAAAAGA 2495
|||||.||.||.||||||||||||||||||||.||.||.|||||||||||
RBAM_025140__ 2446 GATGAGGAGATCGCCCGTCTGCAAAAAGAATTCGACAAGCTGACAAAAGA 2495
BSNT_04080___ 2496 AGTTGAGCGTGTCCAAAAGAAACTTGGAAATGAAGGATTTATGAAAAAAG 2545
.||.||.||.||.||.||.|||||.||.||.||||||||.||.|||||||
RBAM_025140__ 2496 GGTCGAACGCGTTCAGAAAAAACTCGGCAACGAAGGATTCATTAAAAAAG 2545
BSNT_04080___ 2546 CGCCTGCACACGTAATTGATGAAGAACGTGAAAAAGAAAAAGATTATATG 2595
|.||||..||.||.|||||.||||||||.|.||||||.|||||.||.|.|
RBAM_025140__ 2546 CTCCTGAGCATGTCATTGAAGAAGAACGCGGAAAAGAGAAAGACTACACG 2595
BSNT_04080___ 2596 GCGAAGCGTGACGCTGTTCAAAAACGAATGGCTGAGCTGAAGGGTTAA 2643
||.||.||.||.|||||.|...|.||.||.||.||||||||.||.|.|
RBAM_025140__ 2596 GCAAAACGCGAAGCTGTCCGGCAGCGGATTGCAGAGCTGAAAGGCTGA 2643
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