Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04079 and RBAM_025130
See
Amino acid alignment /
Visit
BSNT_04079 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:26
# Commandline: needle
# -asequence dna-align/BSNT_04079___folC.1.9828.seq
# -bsequence dna-align/RBAM_025130___folC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04079___folC-RBAM_025130___folC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04079___folC-RBAM_025130___folC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04079___folC
# 2: RBAM_025130___folC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1354
# Identity: 937/1354 (69.2%)
# Similarity: 937/1354 (69.2%)
# Gaps: 122/1354 ( 9.0%)
# Score: 3045.0
#
#
#=======================================
BSNT_04079___ 1 TTGTTTACTGCATATCAAGATGCGCGCAGCTGGATTCACGGGAGGCTGAA 50
|||||||.|.|.||..||||.|||..|||||||||||||||.||.||.||
RBAM_025130__ 1 TTGTTTAATACGTACAAAGAAGCGATCAGCTGGATTCACGGCAGACTCAA 50
BSNT_04079___ 51 ATTCGGGGTGAAGCCCGGACTTGGCCGAATGAAACAGCTGATGG-----C 95
.|||||.||.|||||.||.|||..|||.|||.||.||||||||| |
RBAM_025130__ 51 GTTCGGCGTTAAGCCGGGCCTTCTCCGTATGGAAAAGCTGATGGAAAAAC 100
BSNT_04079___ 96 GCGGTTAGGACATCCTGAAAAAAAAATCCGAGCGTTCCACGTCGCAGGAA 145
|.|.|||.||.|||||.||.||.||.||..|.||.||.||.||.|
RBAM_025130__ 101 -----TGGAACACCCGGAAAAGAACATTCGCGCCATTCATGTGGCGGGCA 145
BSNT_04079___ 146 CAAACGGTAAAGGATCAACTGTCGCTTTTATCCGTTCTATGCTGCAGGAA 195
|||||||.||||||||.||||||||||||||||||||..||||.||.|||
RBAM_025130__ 146 CAAACGGCAAAGGATCGACTGTCGCTTTTATCCGTTCCGTGCTTCAAGAA 195
BSNT_04079___ 196 GCCGGATATACGGTTGGAACATTTACATCGCCTTATATTATTACGTTTAA 245
.||||.||||||||.||.||.||.|||||||||||.||||||||||||||
RBAM_025130__ 196 TCCGGTTATACGGTCGGCACGTTCACATCGCCTTACATTATTACGTTTAA 245
BSNT_04079___ 246 TGAACGGATCAGCGTAAACGGGATACCGATTTCAGATGAGGAATGGACAG 295
|||.||.||||||||.|||||.|..||||||||.|||||||||||||.|.
RBAM_025130__ 246 TGAGCGTATCAGCGTCAACGGCACGCCGATTTCTGATGAGGAATGGAGAA 295
BSNT_04079___ 296 CACTCGTCAATCAAATGAAACCGCACGTTGAAGCCCTTGATCAAACGGAA 345
|.|||||.|||.|.||.||||||...||.||.|..||||||.|.||.||.
RBAM_025130__ 296 CGCTCGTTAATGACATAAAACCGATAGTCGATGAGCTTGATAAGACCGAT 345
BSNT_04079___ 346 TACGGACAGCCGACAGAATTTGAAATTATGACGGCCTGTGCATTTTTATA 395
..||||..|..|||||||||||||||.||.||.||.||||||||||||||
RBAM_025130__ 346 GCCGGAACGGTGACAGAATTTGAAATCATTACAGCGTGTGCATTTTTATA 395
BSNT_04079___ 396 TTTTGCAGAA----TTTCATAAGGTCGATTTTGTTATTTTTGAAACAGGT 441
|||||| ||| ..|.||| ||||||||||.|||||||||.|.||.
RBAM_025130__ 396 TTTTGC-GAAGCGGGCTGATA---TCGATTTTGTCATTTTTGAAGCGGGG 441
BSNT_04079___ 442 TTGGGCGGTAGATTCGATTCTACTAATGTGGTTGAA-CCGCTCTTAACTG 490
.|.|||||.|.|||.|||||.||.|||.|.| |||| ||||||.|..|.|
RBAM_025130__ 442 CTCGGCGGCACATTTGATTCAACCAATATTG-TGAATCCGCTCCTGTCGG 490
BSNT_04079___ 491 TGATTACAAGCATTGGACACGATCATATGAATATTTTGGGAAACACCATT 540
|.||||||||.||.|||||.||.||||||...|||||.||.||.|||||.
RBAM_025130__ 491 TCATTACAAGTATCGGACATGACCATATGGCGATTTTAGGCAATACCATC 540
BSNT_04079___ 541 GAAGAAATTGCAGG--AGAAAAGGCCGGTATTATTAAAGAAGGTATTCCA 588
||.||.||.||.|| ||||| ||||||||.|||||| .||||||
RBAM_025130__ 541 GAGGAGATCGCCGGGCAGAAA--GCCGGTATCATTAAA-----AATTCCA 583
BSNT_04079___ 589 ATC-----GTTACAGCAGTTACCCAGCCGGAAGCTTTACAG-GTCAT--- 629
.|| .||||.|..||.|..|||||||||||..| |.| ||.||
RBAM_025130__ 584 TTCCGGTTATTACGGGCGTCAATCAGCCGGAAGCACT-CGGCGTTATTGA 632
BSNT_04079___ 630 -CCGCCACGAAGCCG---AACGGCATGCTGCGCCGTTCCAGTCATTGCAT 675
.|| ||||||| ||..|||.||| ||||..||||||.|..||
RBAM_025130__ 633 AGCG----GAAGCCGAAAAAAAGCAGGCT---CCGTATCAGTCACTATAT 675
BSNT_04079___ 676 GA----TGCA---TGTGTTATTTTCAATGAAGAGGCTCTGCCTGCAGGAG 718
.| |||| || ||.|||||||.|||.||.||..|.||.|
RBAM_025130__ 676 AAAACGTGCAGACTG-------TTTAATGAAGCGGCGCTTCCGTCCGGTG 718
BSNT_04079___ 719 AACAG-TTTTCATTCAAAACGGAAGAGAAATGCTATGAAGATATTCGGAC 767
|| || |||||..|..||||||||..|||||||||||||.|.||||..||
RBAM_025130__ 719 AA-AGCTTTTCGCTGGAAACGGAAACGAAATGCTATGAAAACATTCAAAC 767
BSNT_04079___ 768 ATCTCTGATTGGCACCCATCAAAGACAAAATGCTGCTTTGTCCATTTTGG 817
.||.|||||.||||..||.|||||.||.|||||.||.|||.|.||.||||
RBAM_025130__ 768 GTCGCTGATCGGCATTCACCAAAGGCAGAATGCGGCATTGGCGATATTGG 817
BSNT_04079___ 818 CTGCGGAGTGGCTCAAT----AAGGAGAATATCGC--CCATATCAGTGAC 861
|.||.||.|||.|.||| ..|||| .||| ||||.|| |||.
RBAM_025130__ 818 CCGCTGAATGGGTGAATCGTCTGGGAG----CCGCAGCCATTTC--TGAA 861
BSNT_04079___ 862 GAAGCGTTAAGGAGCGGGCTTGTGAAGGCTGCTTGGCCGGGACGGTTAGA 911
||||||.|..|.|.|||.||....||.||..|.||||||||.|||||.||
RBAM_025130__ 862 GAAGCGATGCGAAACGGCCTGAAAAAAGCATCGTGGCCGGGCCGGTTTGA 911
BSNT_04079___ 912 GCTTGTTCAGGAACATCCTCCGGTATATTTA---------GACGGTGCGC 952
.|.|.||| |.|.||.|| .|||| |||||.||||
RBAM_025130__ 912 ACGTCTTC----AAAGCCGCC-----CTTTAGTGTTTGCGGACGGCGCGC 952
BSNT_04079___ 953 ATAACGAAGAAGGTGTTGAAAAGCTGGCGGAAACGATGAAGCAGCGTTTC 1002
||||||||||.||.|||||||.||||.|.||||||||....|||||.||.
RBAM_025130__ 953 ATAACGAAGAGGGCGTTGAAACGCTGACAGAAACGATCCGCCAGCGCTTT 1002
BSNT_04079___ 1003 GCC-----AATTCACG--CATTACTGTGGTGTTTAGCGCGTTAAAGGACA 1045
||| || ||| || |||.||.||.|||||.|||||.||||
RBAM_025130__ 1003 GCCGGTAAAA---ACGTCCA----TGTCGTATTCAGCGCATTAAAAGACA 1045
BSNT_04079___ 1046 AACCGTATCAGAACATGATTAAAAGACTGGAAACCATTGCTCATGCGATT 1095
|||||||||||.|.||||||||||..||.||||||...||..||.|.|||
RBAM_025130__ 1046 AACCGTATCAGGAAATGATTAAAAAGCTTGAAACCGAAGCGGATTCCATT 1095
BSNT_04079___ 1096 CATTTTGCTTCTTTTGATTTCCCGCGTGCTTCTCTTGCAAAAGATCTCTA 1145
||.||||..||.|||||.||.|||||||||||....||..|||..||.||
RBAM_025130__ 1096 CACTTTGTATCATTTGACTTTCCGCGTGCTTCAAGCGCCGAAGCCCTTTA 1145
BSNT_04079___ 1146 TGATGCAAGTGAAATC-AGC-AATAAAAGC-TGGAGTGAAGATCCAGACG 1192
|.|.|||| |.|.|| ||| .||||.||| |.|| |||..|.||.|||.
RBAM_025130__ 1146 TAACGCAA--GCAGTCTAGCGGATAAGAGCTTCGA-TGAGAACCCGGACA 1192
BSNT_04079___ 1193 ATGTGATCAAATTCATAGAAAGCAAAAAG--GGCTCAAATGAAATTACGC 1240
.|||||...|.|..||.||| ||||||| ||..|..||||..|.|...
RBAM_025130__ 1193 GTGTGAAAGAGTGGATTGAA--CAAAAAGATGGTGCGGATGATGTCATCA 1240
BSNT_04079___ 1241 TGATTACCGGATCTCTT-TACTTTATTTCTGACATTCGAAAAAGGTTGAA 1289
|.||||||||.|| ||| |||||||||||.||.||..||||..||.|.|.
RBAM_025130__ 1241 TCATTACCGGCTC-CTTATACTTTATTTCAGAAATGAGAAAGCGGCTTAT 1289
BSNT_04079___ 1290 ATAA 1293
.|.|
RBAM_025130__ 1290 CTGA 1293
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.