Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04064 and RBAM_025050
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:25
# Commandline: needle
# -asequence dna-align/BSNT_04064___minC.1.9828.seq
# -bsequence dna-align/RBAM_025050___minC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04064___minC-RBAM_025050___minC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04064___minC-RBAM_025050___minC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04064___minC
# 2: RBAM_025050___minC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 692
# Identity: 581/692 (84.0%)
# Similarity: 581/692 (84.0%)
# Gaps: 13/692 ( 1.9%)
# Score: 2492.0
#
#
#=======================================
BSNT_04064___ 1 GTGAATATTGTGAAGACCAAAAAGCAGCAATATGTAACAATAAAAGGAAC 50
.||||||||||||||||||||||||||||||||||||||||
RBAM_025050__ 1 ---------ATGAAGACCAAAAAGCAGCAATATGTAACAATAAAAGGAAC 41
BSNT_04064___ 51 AAAGAATGGACTAACATTGCATCTGGATGATGCGTGTTCTTTTGATGAGC 100
|||.||.||..|||||||||||||||||||||||||||||||||||||||
RBAM_025050__ 42 AAAAAACGGCTTAACATTGCATCTGGATGATGCGTGTTCTTTTGATGAGC 91
BSNT_04064___ 101 TTCTCGATGGTCTTCAGAATATGCTGTCAATTGAACAATATACCGATGGA 150
||||||||||||||||.||.||||||||.||||||||||||||.|||||.
RBAM_025050__ 92 TTCTCGATGGTCTTCAAAACATGCTGTCGATTGAACAATATACTGATGGC 141
BSNT_04064___ 151 AAAGGCCAGAAAATCAGCGTTCATGTTAAGCTGGGAAATCGCTTTTTATA 200
||||||||.||||||||.||||||.||||.||.||..||||.|.|.|.||
RBAM_025050__ 142 AAAGGCCAAAAAATCAGTGTTCATATTAAACTCGGGCATCGGTATCTGTA 191
BSNT_04064___ 201 TAAGGAGCAAGAGGAACAGCTAACCGAATTGATTGCGTCAAAGAAAGATT 250
|.||||.||.|..||..||||.||.||..||||.||||||||||||||||
RBAM_025050__ 192 TCAGGAACAGGCAGAGAAGCTGACTGATCTGATCGCGTCAAAGAAAGATT 241
BSNT_04064___ 251 TGTTTGTTCATTCTATTGACAGTGAAGTCATTACTAAAAAAGAAGCACAG 300
|..|.||.|||||.|||||||||||||||||..|.|||.|||||||.|||
RBAM_025050__ 242 TAGTCGTGCATTCAATTGACAGTGAAGTCATCGCCAAAGAAGAAGCGCAG 291
BSNT_04064___ 301 CAGATAAGAGAGGA--AGCCGAAATTATTTCTGTTTCAAAAATTGTCCGT 348
|.|||.|.|||||| || ||||||.||||||||||.|||||.||||||
RBAM_025050__ 292 CGGATGAAAGAGGAGCAG--GAAATTGTTTCTGTTTCCAAAATCGTCCGT 339
BSNT_04064___ 349 TCAGGCCAAGTGCTGCAGGTAAAAGGCGACTTGCTCCTGATCGGTGACGT 398
||.|||||.|||||.||.||.|..||.||.|||||..|.|||||.||.||
RBAM_025050__ 340 TCGGGCCAGGTGCTTCACGTGACGGGAGATTTGCTTTTAATCGGAGATGT 389
BSNT_04064___ 399 GAATCCCGGCGGAACAGTCAGGGCCGGAGGGAACATTTTTGTTCTGGGCT 448
||||||||||||.||..||||.||||||||.||.||.||||||||.||.|
RBAM_025050__ 390 GAATCCCGGCGGTACGATCAGAGCCGGAGGAAATATATTTGTTCTCGGTT 439
BSNT_04064___ 449 CACTGAAAGGAATCGCGCATGCCGGATTTAATGGAAATAATCAAGCGGTC 498
||.|.|||||.||.||.||.||.||.|.|||.||||||||.|..||.||.
RBAM_025050__ 440 CATTAAAAGGGATTGCCCACGCGGGTTATAACGGAAATAACCGGGCTGTG 489
BSNT_04064___ 499 ATCGCCGCCTCTGAAATGCTTCCGACACAATTAAGAATCAATCATGTGTT 548
||||||||.||.||||||.|.|||||||||||.||.||||||||.|||||
RBAM_025050__ 490 ATCGCCGCATCAGAAATGATGCCGACACAATTGAGGATCAATCACGTGTT 539
BSNT_04064___ 549 AAATCGCTCCCCAGACCACATTCAAAAAGGGAACGAAATGGAATGTGCTT 598
||||||||||||||||||||||||||||||||||||.|||||||||||||
RBAM_025050__ 540 AAATCGCTCCCCAGACCACATTCAAAAAGGGAACGACATGGAATGTGCTT 589
BSNT_04064___ 599 ATTTAGATACAGACGGAAATATGGTCATTGAACGCCTTCAACATTTGGCT 648
||||||||||.|||||||||||||||||||||||||||||.||.||||||
RBAM_025050__ 590 ATTTAGATACTGACGGAAATATGGTCATTGAACGCCTTCAGCAATTGGCT 639
BSNT_04064___ 649 CATTTAAGACCTGATCTAACAAGGCTTGAGGGAGGAATGTGA 690
||||||||||||||||||||||||||||||||||||||||||
RBAM_025050__ 640 CATTTAAGACCTGATCTAACAAGGCTTGAGGGAGGAATGTGA 681
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