Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04063 and RBAM_025040
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:25
# Commandline: needle
# -asequence dna-align/BSNT_04063___minD.1.9828.seq
# -bsequence dna-align/RBAM_025040___minD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04063___minD-RBAM_025040___minD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04063___minD-RBAM_025040___minD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04063___minD
# 2: RBAM_025040___minD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 814
# Identity: 677/814 (83.2%)
# Similarity: 677/814 (83.2%)
# Gaps: 11/814 ( 1.4%)
# Score: 2850.0
#
#
#=======================================
BSNT_04063___ 1 ------TTGGGTGAGGCTATCGTAATAACTTCGGGAAAAGGCGGAGTAGG 44
||||||||||||||||||||||||||||||||||||||||||||
RBAM_025040__ 1 GTGAAATTGGGTGAGGCTATCGTAATAACTTCGGGAAAAGGCGGAGTAGG 50
BSNT_04063___ 45 TAAGACAACAACATCTGCGAACCTCGGTACCGCCTTAGCCATTTTAGGGA 94
|||.||||||||||||||.|||||||||||||||||||||||||||||||
RBAM_025040__ 51 TAAAACAACAACATCTGCAAACCTCGGTACCGCCTTAGCCATTTTAGGGA 100
BSNT_04063___ 95 AGCGCGTATGCTTAGTAGATACTGATATAGGACTGCGCAACCTTGATGTT 144
|||||||.||.||.|||||.||.|||||.||||||||||||||||||||.
RBAM_025040__ 101 AGCGCGTCTGTTTGGTAGACACAGATATCGGACTGCGCAACCTTGATGTC 150
BSNT_04063___ 145 GTAATGGGTCTTGAAAATAGAATTATTTACGATCTGGTAGACGTTGTAGA 194
|||||||||||||||||.||||||||||||||..|.|||||.||..|.||
RBAM_025040__ 151 GTAATGGGTCTTGAAAACAGAATTATTTACGACTTAGTAGATGTAATTGA 200
BSNT_04063___ 195 GGGCAGATGCAAAATGCATCAGGCGCTCGTAAAAGACAAACGTTTCGATG 244
.|||||||||||.|.||||||||||||.||.||||||||||||||.||||
RBAM_025040__ 201 AGGCAGATGCAAGACGCATCAGGCGCTTGTCAAAGACAAACGTTTTGATG 250
BSNT_04063___ 245 ATCTGCTCTATTTAATGCCCGCTGCTCAAACGAGCGATAAGACAGCTGTT 294
|||||||..||||||||||.|||||.||.||.|||||.|||||.||||||
RBAM_025040__ 251 ATCTGCTTCATTTAATGCCGGCTGCCCAGACAAGCGACAAGACGGCTGTT 300
BSNT_04063___ 295 GCTCCTGAACAAATTAAAAACATGGTCCAAGAGCTCAAACAGGAATTTGA 344
|..|||||.||.||.|||....|.||.||.|||||.||.|||||||||||
RBAM_025040__ 301 GTCCCTGAGCAGATCAAATCGCTTGTGCAGGAGCTTAAGCAGGAATTTGA 350
BSNT_04063___ 345 CTATGTCATCATAGACTGTCCTGCCGGAATCGAGCAAGGGTACAAAAATG 394
.||||||||.||.||.|||||.||||||||.||.|||||.||.|||||||
RBAM_025040__ 351 TTATGTCATTATTGATTGTCCGGCCGGAATTGAACAAGGCTATAAAAATG 400
BSNT_04063___ 395 CCGTTTCCGGAGCTGATAAAGCGATTGTGGTCACTACGCCTGAAATCTCA 444
||||.||||||||||||||.||||||||.||.||.|||||.|||||.|||
RBAM_025040__ 401 CCGTCTCCGGAGCTGATAAGGCGATTGTTGTGACGACGCCGGAAATATCA 450
BSNT_04063___ 445 GCTGTTCGTGATGCTGACCGTATTATAGGGCTGCTGGAGCAAGAAGAAAA 494
||.||.||.||.||||||||.|||||.||.||..|||||||.|||| |
RBAM_025040__ 451 GCGGTGCGGGACGCTGACCGCATTATCGGACTTTTGGAGCAGGAAG---A 497
BSNT_04063___ 495 TGTTGAACCGCCGCGGCTCGTTGTTAACAGAATCAGAAATCACCTGATGA 544
|.|.|||||||||||.||..|.||.|||.|.|||||||||||||||||||
RBAM_025040__ 498 TATCGAACCGCCGCGCCTTATCGTGAACCGCATCAGAAATCACCTGATGA 547
BSNT_04063___ 545 AAAACGGTGACACGATGGATATCGACGAAATCGTACAGCATCTGTCGATC 594
||||||||||||||||||||.|.||.|||.|.||.||.||||||||.||.
RBAM_025040__ 548 AAAACGGTGACACGATGGATGTGGATGAAGTTGTTCATCATCTGTCTATT 597
BSNT_04063___ 595 GATTTGCTCGGAATCGTGGCTGATGATGATGAAGTCATTAAAGCTTCCAA 644
|||.|.|||||||||||.|||||.|||||||||||.||.|..|||||.||
RBAM_025040__ 598 GATCTCCTCGGAATCGTTGCTGACGATGATGAAGTGATCAGGGCTTCAAA 647
BSNT_04063___ 645 TCAT-GGCGAACCGATTGCGATGGACCCTAAAAACCGCGCTTCCATTGCA 693
| || ||||||||||||||.|||.|..|.|||||||||||...||||||.
RBAM_025040__ 648 T-ATCGGCGAACCGATTGCCATGAATTCCAAAAACCGCGCCAGCATTGCG 696
BSNT_04063___ 694 TATCGCAATATTGCCCGCCGCATCTTAGGTGAATCTGTTCCTTTACAGGT 743
||.||||||||.|||||.|||||.|||||.|||||.||||||||.|||||
RBAM_025040__ 697 TACCGCAATATCGCCCGGCGCATTTTAGGAGAATCCGTTCCTTTGCAGGT 746
BSNT_04063___ 744 GCTTGAAGAGCAAAACAAAGGAATGATGGCTAAGATTAAGTCATTTTTCG 793
||||||||||||..|.|||||.||||||||.||.||.|||||||||||||
RBAM_025040__ 747 GCTTGAAGAGCAGCAAAAAGGGATGATGGCGAAAATCAAGTCATTTTTCG 796
BSNT_04063___ 794 GAGTAAGATCTTAA 807
|.||..|.||.|||
RBAM_025040__ 797 GCGTGCGTTCATAA 810
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