Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04060 and RBAM_025010
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:24
# Commandline: needle
# -asequence dna-align/BSNT_04060___rplU.1.9828.seq
# -bsequence dna-align/RBAM_025010___rplU.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04060___rplU-RBAM_025010___rplU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04060___rplU-RBAM_025010___rplU.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04060___rplU
# 2: RBAM_025010___rplU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity: 290/309 (93.9%)
# Similarity: 290/309 (93.9%)
# Gaps: 0/309 ( 0.0%)
# Score: 1374.0
#
#
#=======================================
BSNT_04060___ 1 ATGTACGCAATCATTAAAACAGGCGGTAAACAAATCAAAGTTGAAGAAGG 50
||||||||||||||||||||||||||.|||||||||||||||||||||||
RBAM_025010__ 1 ATGTACGCAATCATTAAAACAGGCGGAAAACAAATCAAAGTTGAAGAAGG 50
BSNT_04060___ 51 CCAAACTGTTTACATCGAAAAACTTGCTGCTGAAGCAGGTGAAACAGTTA 100
.|||||||||||||||||||||||||||||||||||||||||||||||.|
RBAM_025010__ 51 TCAAACTGTTTACATCGAAAAACTTGCTGCTGAAGCAGGTGAAACAGTGA 100
BSNT_04060___ 101 CTTTTGAAGACGTTTTGTTTGTTGGCGGAGACAACGTGAAAGTCGGCAAC 150
|.|||||||||||.|||||||||||||||||||.||||||||||||||||
RBAM_025010__ 101 CGTTTGAAGACGTATTGTTTGTTGGCGGAGACAGCGTGAAAGTCGGCAAC 150
BSNT_04060___ 151 CCTACAGTTGAAGGCGCAACAGTAACGGCTAAAGTTGAAAAACAAGGCCG 200
||.|||||||.||||||.|||||.||.|||||||||||||||||||||||
RBAM_025010__ 151 CCAACAGTTGCAGGCGCGACAGTTACAGCTAAAGTTGAAAAACAAGGCCG 200
BSNT_04060___ 201 CGCGAAAAAAATCACTGTTTTCAGATACAAACCAAAGAAAAACGTTCATA 250
.|||||||||||||||||||||.|.|||||.|||||||||||.|||||||
RBAM_025010__ 201 TGCGAAAAAAATCACTGTTTTCCGTTACAAGCCAAAGAAAAATGTTCATA 250
BSNT_04060___ 251 AAAAACAAGGTCATCGTCAGCCTTACACTAAAGTGACGATCGAAAAAATC 300
|||||||||||||||||||||||||.||||||.||||.||||||||||||
RBAM_025010__ 251 AAAAACAAGGTCATCGTCAGCCTTATACTAAATTGACAATCGAAAAAATC 300
BSNT_04060___ 301 AACGCGTAA 309
|||||||||
RBAM_025010__ 301 AACGCGTAA 309
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