Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04058 and RBAM_024990

See Amino acid alignment / Visit BSNT_04058 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:24
# Commandline: needle
#    -asequence dna-align/BSNT_04058___rpmA.1.9828.seq
#    -bsequence dna-align/RBAM_024990___rpmA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04058___rpmA-RBAM_024990___rpmA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04058___rpmA-RBAM_024990___rpmA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04058___rpmA
# 2: RBAM_024990___rpmA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 285
# Identity:     273/285 (95.8%)
# Similarity:   273/285 (95.8%)
# Gaps:           0/285 ( 0.0%)
# Score: 1317.0
# 
#
#=======================================

BSNT_04058___      1 ATGCTTAGATTAGATCTTCAGTTTTTCGCTTCTAAAAAAGGAGTAGGTTC     50
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
RBAM_024990__      1 ATGCTTAGATTAGATCTTCAGTTTTTCGCTTCTAAAAAAGGTGTAGGTTC     50

BSNT_04058___     51 TACAAAGAACGGACGTGACTCTGAGGCTAAACGTTTAGGTGCTAAACGTG    100
                     ||||||||||||||||||||||||..|||||||||||||.||||||||||
RBAM_024990__     51 TACAAAGAACGGACGTGACTCTGAATCTAAACGTTTAGGCGCTAAACGTG    100

BSNT_04058___    101 CTGACGGTCAATTCGTAACAGGCGGTTCTATCCTTTACCGTCAACGCGGA    150
                     |.|||||||||||||||||||||||.||||||||||||||||||||||||
RBAM_024990__    101 CAGACGGTCAATTCGTAACAGGCGGATCTATCCTTTACCGTCAACGCGGA    150

BSNT_04058___    151 ACAAAAATTTACCCAGGTGAAAACGTGGGCCGCGGCGGAGATGACACTCT    200
                     ||.|||||.||||||||||||||||||||||||||.||||||||||||||
RBAM_024990__    151 ACGAAAATCTACCCAGGTGAAAACGTGGGCCGCGGAGGAGATGACACTCT    200

BSNT_04058___    201 ATTTGCGAAAATCGACGGAACTGTTAAATTCGAACGTTTCGGCCGTGACC    250
                     .|||||.||||||||||||.||||||||||||||||||||||||||||||
RBAM_024990__    201 TTTTGCTAAAATCGACGGAGCTGTTAAATTCGAACGTTTCGGCCGTGACC    250

BSNT_04058___    251 GCAAAAAAGTGAGCGTATATCCTGTAGCTCAATAA    285
                     |||||||||||||||||||||||||||||||||||
RBAM_024990__    251 GCAAAAAAGTGAGCGTATATCCTGTAGCTCAATAA    285


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