Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04056 and RBAM_024980
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:24
# Commandline: needle
# -asequence dna-align/BSNT_04056___spo0B.1.9828.seq
# -bsequence dna-align/RBAM_024980___spo0B.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04056___spo0B-RBAM_024980___spo0B.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04056___spo0B-RBAM_024980___spo0B.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04056___spo0B
# 2: RBAM_024980___spo0B
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 582
# Identity: 469/582 (80.6%)
# Similarity: 469/582 (80.6%)
# Gaps: 6/582 ( 1.0%)
# Score: 1876.0
#
#
#=======================================
BSNT_04056___ 1 ATGAAGGATGTTTCAAAAAATCAAGAAGAAAATATAAGCGACACGGCATT 50
|||||||||||.||.||.||.|||||||||..|.|||||||..||||..|
RBAM_024980__ 1 ATGAAGGATGTATCGAAGAAACAAGAAGAACCTGTAAGCGATGCGGCTCT 50
BSNT_04056___ 51 AACAAACGAACTGATTCATCTGCTTGGCCATTCCCGGCATGATTGGATGA 100
.|..||.||.|||||.||..|..|.|||||||.|||.|||||||||||||
RBAM_024980__ 51 GATCAATGAGCTGATCCAATTAATGGGCCATTTCCGTCATGATTGGATGA 100
BSNT_04056___ 101 ATAAGCTGCAGCTGATTAAAGGAAACTTAAGCTTACAGAAGTATGACCGT 150
||||||||||||||||.||||||||||||||.||.||||||||||||.|.
RBAM_024980__ 101 ATAAGCTGCAGCTGATAAAAGGAAACTTAAGTTTGCAGAAGTATGACAGG 150
BSNT_04056___ 151 GTCTTTGAAATGATTGAAGAAATGGTTATAGACGCAAAGCACGAATCAAA 200
|||.|||||||.|||||.||||||||.|||||.|||||||||||||||||
RBAM_024980__ 151 GTCGTTGAAATTATTGACGAAATGGTCATAGATGCAAAGCACGAATCAAA 200
BSNT_04056___ 201 GCTCTCAAACCTGAAAACACCGCATTTGGCGTTTGATTTTCTTACGTTTA 250
||||||||||||||||||.|||||.|||||||||||.||||||||.||||
RBAM_024980__ 201 GCTCTCAAACCTGAAAACCCCGCACTTGGCGTTTGACTTTCTTACATTTA 250
BSNT_04056___ 251 ATTGGAAAACCCATTATATGACGCTTGAATATGAAGTTCTCGGAGAAATT 300
|||||||..|||.||||||||.|||.|||||.|||||.||||||||||||
RBAM_024980__ 251 ATTGGAAGTCCCGTTATATGAGGCTCGAATACGAAGTGCTCGGAGAAATT 300
BSNT_04056___ 301 AAGGATTTGTCGGCTTATGATCAAAAGCTGGCGAAACTGATGAGAAAGCT 350
||.|||||.|||||.|||||||||||||||.||||.|||||||||||.||
RBAM_024980__ 301 AAAGATTTATCGGCATATGATCAAAAGCTGTCGAACCTGATGAGAAAACT 350
BSNT_04056___ 351 GTTTCATCTGTTTGATCAAGCAGTCAGCAGAGAGAGTGAAAATCATTTAA 400
||||||||||||.|.||..||.||.|..|..||.||||||||||||.|.|
RBAM_024980__ 351 GTTTCATCTGTTCGGTCTGGCGGTAAATAATGAAAGTGAAAATCATCTGA 400
BSNT_04056___ 401 CGGTTTCGCTTCAAACGGATCATCCTGACAGACAGCTGATTCTGTACCTT 450
|.||.|||||.||.||||||||.||||||||||||||.|||.|.||.||.
RBAM_024980__ 401 CCGTATCGCTGCAGACGGATCACCCTGACAGACAGCTTATTGTATATCTC 450
BSNT_04056___ 451 GATTTTCACGGCGCCTTTGCCGATCCATCTGCTTTTGATGATATTCGGCA 500
||||||||.||..|..||||..||.||..||..|||||||| |||..|||
RBAM_024980__ 451 GATTTTCATGGAACGATTGCAAATGCAGATGTGTTTGATGA-ATTTCGCA 499
BSNT_04056___ 501 GAAT---GGATATGAGGACATTGATATCATGCGTTTTGAAATCACGAGTC 547
||| || .||||||||.|||||.||||||..|||||..|.||..|.|
RBAM_024980__ 500 -AATCCCGG-CATGAGGACTTTGATGTCATGCAATTTGAGCTGACCGGCC 547
BSNT_04056___ 548 ACGAATGTTTGATTGAAATTGGGTTGGACTAG 579
|.||||||.||...||||||||..||.|||||
RBAM_024980__ 548 ATGAATGTGTGGCCGAAATTGGAATGAACTAG 579
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