Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04045 and RBAM_024900
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:23
# Commandline: needle
# -asequence dna-align/BSNT_04045___nadA.1.9828.seq
# -bsequence dna-align/RBAM_024900___nadA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04045___nadA-RBAM_024900___nadA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04045___nadA-RBAM_024900___nadA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04045___nadA
# 2: RBAM_024900___nadA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1140
# Identity: 827/1140 (72.5%)
# Similarity: 827/1140 (72.5%)
# Gaps: 69/1140 ( 6.1%)
# Score: 2877.5
#
#
#=======================================
BSNT_04045___ 1 ATGTCAATTCTTGATGTGATCA----AACAATCGAATGATATGATGCCCG 46
|||||.|||.||||.|||.|.| |.||..|||| ||||||||
RBAM_024900__ 1 ATGTCTATTTTTGACGTGCTAACTGCATCAGCCGAA----ATGATGCC-- 44
BSNT_04045___ 47 AAAG---TTATAAAGA-------ACTATCGAGAAAGGATATGGAAACGCG 86
.|| ||||||||| || |.||||| |||||||.|||
RBAM_024900__ 45 -GAGCCATTATAAAGACATGAGCAC--TGGAGAA-----ATGGAAAAGCG 86
BSNT_04045___ 87 CGTTGCCGCCATTAAAAAAAAG----TTCGG-CAGCAGGCTCTTTATACC 131
.||.||||||||| |||.| ||||| .||| |.||.||.||.||
RBAM_024900__ 87 GGTCGCCGCCATT----AAACGGGCTTTCGGAAAGC-GCCTGTTCATTCC 131
BSNT_04045___ 132 AGGCCATCATTATCAAAAGGATGAAGTGATACAATTTGCTGACCAAACAG 181
.||.|||||.||||||||.||.|||||.||||||||.||.||.....|||
RBAM_024900__ 132 GGGGCATCACTATCAAAAAGACGAAGTAATACAATTCGCCGATACGGCAG 181
BSNT_04045___ 182 GCGACTCCCTGCAATTGGCCCAAGTAGCGGAAAAAAACAAAGAAGCGGAT 231
|.|||||||||||..|.||.|||||.||.||||||||.|||||.|||||.
RBAM_024900__ 182 GTGACTCCCTGCAGCTTGCTCAAGTGGCAGAAAAAAATAAAGAGGCGGAA 231
BSNT_04045___ 232 TATATCGTATTTTGCGGCGTTCACTTTATGGCAGAAACCGCCGATATGCT 281
|||||.||.|||||||||||.||.||||||||.||||||||.||||||||
RBAM_024900__ 232 TATATTGTGTTTTGCGGCGTGCATTTTATGGCGGAAACCGCTGATATGCT 281
BSNT_04045___ 282 GAC--AAGCGAGCGGCAAACGGTCGTCCTGCCAGATATGAGAGCAGGATG 329
||| |.|..|.| |||||.|||.|..||||.||.|||.|.||.|||||
RBAM_024900__ 282 GACTGATGATAAC--CAAACCGTCATTTTGCCCGACATGCGCGCCGGATG 329
BSNT_04045___ 330 TTCTATGGCTGACATGGCTGACATGCAGCAGACCAATAGGGCATGG-AAG 378
.||.||||||||.|||||.||.||.||||||||..|.|..|||||| |||
RBAM_024900__ 330 CTCGATGGCTGATATGGCAGATATTCAGCAGACGGACAAAGCATGGCAAG 379
BSNT_04045___ 379 AAGCTTCAGCATATATTTGGAGATACGATCATACCTTTAACTTATGTGAA 428
|||||||..|..|.|..||..|.||.|||||.||.|||||.|||||.||
RBAM_024900__ 380 -AGCTTCAAGAACTGTACGGTAACACCATCATTCCGTTAACATATGTTAA 428
BSNT_04045___ 429 CTCCACTGCGGAGATCAAGGCATTCGTCGGAAAACATGGCGGAGCAACTG 478
|||.||.|||||.||.||.||||||||||||...||.||.|||||.||.|
RBAM_024900__ 429 CTCGACGGCGGAAATTAAAGCATTCGTCGGACGGCACGGGGGAGCGACCG 478
BSNT_04045___ 479 TGACTTCTTCAAATGCGAAAAAAGTGCTTGAATGGGCGTTTACACAGAAA 528
|.||.|||||.|||||....|..|||||..|||||||.||||.|||.|||
RBAM_024900__ 479 TCACCTCTTCGAATGCCCGGAGTGTGCTGAAATGGGCTTTTAAACAAAAA 528
BSNT_04045___ 529 AAAAGAATTTTATTTTTGCCTGATCAGCATTTAGGGAGAAATACGGCTTA 578
.|.|||||||||||||||||.||||||||||||||.|||||||||||.||
RBAM_024900__ 529 GAGAGAATTTTATTTTTGCCGGATCAGCATTTAGGCAGAAATACGGCCTA 578
BSNT_04045___ 579 TGATCTGGGCATTGCGCTCGA-AGATATGGCTGTGTGGGACCCG----AT 623
|||.||.||||||.|||| || |||.||||||||.||||||||| |.
RBAM_024900__ 579 TGACCTCGGCATTCCGCT-GACAGAAATGGCTGTATGGGACCCGGTGCAG 627
BSNT_04045___ 624 AAAAGATGAATTAGTAGCTGA--ATCCGGGCATACGAATGTGAAAGTGAT 671
||..|||...||| |||| |||||| ..||..|.||.||.||
RBAM_024900__ 628 AACCGATTGCTTA----CTGACCATCCGG-----AAAACATTAAGGTTAT 668
BSNT_04045___ 672 TTTGTGGAAAGGGCATTGCTCTGTTCACGAGAAATTCACCACTAAAAATA 721
..|.|||||||||||||||||.||.|||||.||.||.||..|..||||||
RBAM_024900__ 669 CCTTTGGAAAGGGCATTGCTCCGTACACGAAAAGTTTACAGCGGAAAATA 718
BSNT_04045___ 722 TCCTTGATATGAGAGAGCGAGACCCCGACATTCAGATCATTGTGCACCCG 771
|...|.|..||.|..||||.||..|||.|||.|..||.||.||.||.|||
RBAM_024900__ 719 TTTCTCAGCTGCGGCAGCGGGATTCCGGCATCCGCATTATCGTTCATCCG 768
BSNT_04045___ 772 GAATGTTCACACGAAGTCGTGACACTAAGCGATGATAACGGATCAACGAA 821
||||||||.|..|||||.||..|.||.||.||.||.|.|||.||.||.||
RBAM_024900__ 769 GAATGTTCGCGGGAAGTGGTCTCGCTCAGTGACGACAGCGGGTCTACCAA 818
BSNT_04045___ 822 ATATATTATCGACACAATCAACCAGGCTCCGGCGGGAAGCAAGTGGGCAA 871
|||.|||||.||.||.|||.|.||||||....||||||||||||||||.|
RBAM_024900__ 819 ATACATTATTGATACGATCGAACAGGCTGAACCGGGAAGCAAGTGGGCGA 868
BSNT_04045___ 872 TCGGGACAGAAATGAATCTTGTTCAGCGGATCATTCACGAGCATCCAGAT 921
||||.||.||||||||||||||.|||||..||||||||..||||||.|||
RBAM_024900__ 869 TCGGCACGGAAATGAATCTTGTCCAGCGCCTCATTCACTCGCATCCGGAT 918
BSNT_04045___ 922 AAACAAATCGAATCACTCAACCCTGACATGTGCCCTTGCCTGACAATGAA 971
|||||.||.||||||.|.||.||.||.|||||.||.||.|||||||||||
RBAM_024900__ 919 AAACAGATTGAATCATTGAATCCCGATATGTGTCCGTGTCTGACAATGAA 968
BSNT_04045___ 972 CCGAATTGATTTGCCGCATTTGTTGTGGTCGCTGGAACAAATTGAAAAAG 1021
|.||||.||..||||||||||.|||||||||||.||.||..|||||||||
RBAM_024900__ 969 CAGAATCGACCTGCCGCATTTATTGTGGTCGCTTGAGCAGCTTGAAAAAG 1018
BSNT_04045___ 1022 GAGAACCTTCAGGCGTCATCAAGGTGCCAAAAGCCATTCAGGA-AGATGC 1070
|.||.||....||.|||||.||.||.||..||||..||| ||| |||.||
RBAM_024900__ 1019 GCGAGCCGAAGGGTGTCATTAAAGTTCCGGAAGCGGTTC-GGACAGAAGC 1067
BSNT_04045___ 1071 ACTCCTTGCCCTGAATCGAATGCTTTCGA-TC--ACGTAG 1107
.||.|.|||..||||..||||||| || || |||||.
RBAM_024900__ 1068 GCTTCGTGCTTTGAACAGAATGCT---GAGTCATACGTAA 1104
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