Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04025 and RBAM_024860
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:23
# Commandline: needle
# -asequence dna-align/BSNT_04025___bofC.1.9828.seq
# -bsequence dna-align/RBAM_024860___bofC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04025___bofC-RBAM_024860___bofC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04025___bofC-RBAM_024860___bofC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04025___bofC
# 2: RBAM_024860___bofC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 542
# Identity: 377/542 (69.6%)
# Similarity: 377/542 (69.6%)
# Gaps: 61/542 (11.3%)
# Score: 1286.5
#
#
#=======================================
BSNT_04025___ 1 GTGAAACGATTCAGCACGGCGTATCTTTTGCTGGGC-ATTCTT--TGC-- 45
|||||||||.|..| ||| ||||.|.| |||.|| |||
RBAM_024860__ 1 GTGAAACGAATTTG--CGG---------TGCTCGTCTATTGTTTATGCTT 39
BSNT_04025___ 46 ------TCAGCGGCAGT----ATTT-----TTAATAGGAGCTCCTTCCCG 80
||.||.||||| |||| ..||.|| |
RBAM_024860__ 40 ATCTTATCGGCTGCAGTCCTGATTTGCGGAGGAAAAG------------G 77
BSNT_04025___ 81 CGCACTTGGCGCGGAAGTGGAGCACTATGAGCCGCTGCAGGTGCATGTGC 130
||||...||.|||||.||.|||||.||.|.||||||.|.||||||.||.|
RBAM_024860__ 78 CGCATACGGGGCGGAGGTCGAGCATTACGGGCCGCTTCGGGTGCACGTCC 127
BSNT_04025___ 131 AGCTTGAAAAGGTGTATTTGGACGGCGATGTCAGCATTGAGCATAGGCAT 180
||||.||||||||.|||.|||||||.||||||.||||.||.||||.|.||
RBAM_024860__ 128 AGCTGGAAAAGGTCTATCTGGACGGTGATGTCGGCATCGAACATACGGAT 177
BSNT_04025___ 181 GAAAAAGTGTTTTCTATGGATGATTTTTGGGCAGCTTATGCCGGATGGAC 230
||||..||.||..|.|||||.|||||||||||.||.|||||.||.|||||
RBAM_024860__ 178 GAAACCGTTTTGGCGATGGAGGATTTTTGGGCCGCATATGCGGGCTGGAC 227
BSNT_04025___ 231 GCTTGTGGAACAAAAAAAGGGATATGTGCTCTTCCGGAAGCAAATGGACG 280
|||.||.||.||.|||||.||.|..||.||.|||||.|||||..|.||.|
RBAM_024860__ 228 GCTCGTTGAGCAGAAAAAAGGCTTCGTCCTTTTCCGTAAGCATGTTGATG 277
BSNT_04025___ 281 ATATATCTCCGCTCAGCAAGGTCAACGGGTATATCGGTGTATCGGATAAT 330
|.||.|||||||||||.|||||.|||||.||||||||.||..||||....
RBAM_024860__ 278 ACATTTCTCCGCTCAGTAAGGTTAACGGTTATATCGGCGTCACGGACGGG 327
BSNT_04025___ 331 GGAGTGATTTCTACTTTTCATGGGCG-GCCTGAGCCAGCT-TCCGAACCA 378
||.||.||.||.||||||||.||.|| .||.||.| ||| .||||.||.
RBAM_024860__ 328 GGCGTCATCTCCACTTTTCACGGCCGTCCCGGATC--GCTGGCCGAGCCG 375
BSNT_04025___ 379 ATTCAGTCTTTTTTTCAAATTGATTTAGAAAGGCTGGAAAGCC-ATATGC 427
|||||.|||||.||.||.||||||.|||||||.|||||||||| || |||
RBAM_024860__ 376 ATTCAATCTTTCTTCCAGATTGATATAGAAAGACTGGAAAGCCGAT-TGC 424
BSNT_04025___ 428 AAAAAAATCTGC---TGAAA---GGCATTCCATTTCGGACAAAAGCGGAG 471
|||| || ||.|| |||||.||.|...||||||||||||||
RBAM_024860__ 425 AAAA------GCACTTGGAACACGGCATACCGTACAGGACAAAAGCGGAG 468
BSNT_04025___ 472 TTTGAGGATGTCATCGAACATATGAAGACATACAGCGGGTAA 513
||||||...||.|||||.|||||.|||||.||||||||.|.|
RBAM_024860__ 469 TTTGAGAGCGTGATCGATCATATTAAGACTTACAGCGGCTGA 510
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