Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04019 and RBAM_024820
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:22
# Commandline: needle
# -asequence dna-align/BSNT_04019___tgt.1.9828.seq
# -bsequence dna-align/RBAM_024820___tgt.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04019___tgt-RBAM_024820___tgt.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04019___tgt-RBAM_024820___tgt.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04019___tgt
# 2: RBAM_024820___tgt
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1147
# Identity: 976/1147 (85.1%)
# Similarity: 976/1147 (85.1%)
# Gaps: 2/1147 ( 0.2%)
# Score: 4184.0
#
#
#=======================================
BSNT_04019___ 1 GTGGCTGAACAACCAATACGCTATGAATTTATAAAAGAATGCAAACAAAC 50
||||||||||||||.|||||.||||||||||||||.||||||||||||||
RBAM_024820__ 1 GTGGCTGAACAACCGATACGTTATGAATTTATAAAGGAATGCAAACAAAC 50
BSNT_04019___ 51 AGGAGCGCGGCTGGGCAAAGTGCATACGCCTCACGGCTCCTTCGAAACGC 100
.||||||||.|||||||.|||.||||||||.|||||||||||.||.||||
RBAM_024820__ 51 GGGAGCGCGCCTGGGCAGAGTCCATACGCCCCACGGCTCCTTTGAGACGC 100
BSNT_04019___ 101 CGGTTTTTATGCCGGTCGGCACACTGGCGACAGTCAAAACAATGTCGCCT 150
|.||.|||||||||||||||||.||.||.||.||.||.||.|||||.||.
RBAM_024820__ 101 CTGTATTTATGCCGGTCGGCACGCTTGCTACGGTAAAGACGATGTCTCCG 150
BSNT_04019___ 151 GAAGAGCTGAAAGCAATGGATGCAGGCATCATTTTGAGCAACACTTATCA 200
||.|||||||||.|.||||||||.|||||.|||||.|||||.||.||.||
RBAM_024820__ 151 GACGAGCTGAAATCTATGGATGCGGGCATTATTTTAAGCAATACGTACCA 200
BSNT_04019___ 201 TCTATGGCTTCGTCCGGGCCAAGACATTGTCAAAGAAGCGGGCGGGCTCC 250
|.|||||||.||.|||||.||.||||||||.|||||||||||||||||.|
RBAM_024820__ 201 TTTATGGCTCCGCCCGGGACATGACATTGTAAAAGAAGCGGGCGGGCTTC 250
BSNT_04019___ 251 ATAAATTTATGAACTGGGACCGCGCAATTTTAACAGATTCAGGCGGTTTT 300
||||.||||||||||||||||||||.||||||||.|||||.|||||||||
RBAM_024820__ 251 ATAAGTTTATGAACTGGGACCGCGCGATTTTAACGGATTCCGGCGGTTTT 300
BSNT_04019___ 301 CAGGTCTTTTCTTTAAGCAAGTTTCGTAATATAGAGGAAGAGGGTGTCCA 350
|||||||||||.||.||||||||||||||||||||.|||||.||.||.||
RBAM_024820__ 301 CAGGTCTTTTCATTGAGCAAGTTTCGTAATATAGAAGAAGAAGGCGTTCA 350
BSNT_04019___ 351 TTTCCGCAATCATCTAAATGGAGACAAGCTGTTTTTATCTCCGGAAAAAG 400
||||||||||||..||||.|||||||||||||||||||||||||||||||
RBAM_024820__ 351 TTTCCGCAATCACTTAAACGGAGACAAGCTGTTTTTATCTCCGGAAAAAG 400
BSNT_04019___ 401 CGATGGAGATCCAAAACGCACTCGGCTCTGATATTATGATGGCGTTTGAC 450
|||||||.||.||||||||.||||||||||||||.||||||||||||||.
RBAM_024820__ 401 CGATGGAAATTCAAAACGCCCTCGGCTCTGATATCATGATGGCGTTTGAT 450
BSNT_04019___ 451 GAATGCCCACCATACCCGGCGGAGTACGACTACATGAAGAGGTCAGTTGA 500
||.||.||.||.||.|||||.|||||.||.||||||||..|.||.||.||
RBAM_024820__ 451 GAGTGTCCGCCGTATCCGGCAGAGTATGATTACATGAAACGCTCTGTGGA 500
BSNT_04019___ 501 ACGGACAAGCCGTTGGGCGGAACGCTGCCTGAATGCCCACAATCG-TCAG 549
||||||.|||||.||||||||||||||||||.|.||.|||...|| |||
RBAM_024820__ 501 ACGGACCAGCCGCTGGGCGGAACGCTGCCTGGAGGCGCACGGGCGCTCA- 549
BSNT_04019___ 550 GATGAACAAGGGCTGTTTGGTATTGTACAAGGCGGAGAATATGAAGATCT 599
|||||.||.||||||||.||.||.|||||.|||||||||||.|||||.||
RBAM_024820__ 550 GATGAGCAGGGGCTGTTCGGAATCGTACAGGGCGGAGAATACGAAGACCT 599
BSNT_04019___ 600 GCGGACACAAAGTGCGAAGGACTTGATTTCGCTTGATTTTCCCGGATATG 649
|||||||||||||||.||.||||||.||||||||||||||||.||.||||
RBAM_024820__ 600 GCGGACACAAAGTGCAAAAGACTTGGTTTCGCTTGATTTTCCGGGGTATG 649
BSNT_04019___ 650 CTATAGGCGGATTGTCTGTTGGTGAACCGAAGGATGTCATGAATCGTGTA 699
|.||||||||.||.|||||.||.||.||||||.|.||||||||.||.||.
RBAM_024820__ 650 CCATAGGCGGGTTATCTGTCGGCGAGCCGAAGCACGTCATGAACCGAGTG 699
BSNT_04019___ 700 CTCGAATTTACAACACCGCTCTTGCCGAAGGATAAACCGAGATATCTGAT 749
||.||.||||||||.|||||..|.||||||||.||.|||||||||.|.||
RBAM_024820__ 700 CTTGAGTTTACAACTCCGCTTCTACCGAAGGACAAGCCGAGATATTTAAT 749
BSNT_04019___ 750 GGGAGTAGGTTCTCCGGACGCACTGATCGACGGAGCGATCCGCGGGGTCG 799
|||.||.|||||.|||||.||..|.||.|||||.||.||||||||.||.|
RBAM_024820__ 750 GGGTGTGGGTTCACCGGATGCCTTAATTGACGGCGCCATCCGCGGCGTGG 799
BSNT_04019___ 800 ATATGTTTGACTGTGTGCTGCCTACACGGATTGCAAGAAACGGCACAGTG 849
|||||||||||||.||.|||||.||.||||||||..||||||||||.|||
RBAM_024820__ 800 ATATGTTTGACTGCGTACTGCCGACCCGGATTGCCCGAAACGGCACGGTG 849
BSNT_04019___ 850 TTTACTGCTGAAGGACGACTCAATATGAAAAATGCGAAATTTGAAAGAGA 899
|||||...||||||.||.||.|||||||||||.||.||||.|||..|.||
RBAM_024820__ 850 TTTACGAATGAAGGGCGTCTGAATATGAAAAACGCCAAATATGAGCGTGA 899
BSNT_04019___ 900 CTTCCGTCCGATTGATGAAGAGTGTGATTGCTATACATGTAAAAACTACA 949
.|||||||||||||||||||||||....|||.|||||||.|||||.|||.
RBAM_024820__ 900 TTTCCGTCCGATTGATGAAGAGTGCAGCTGCCATACATGCAAAAATTACT 949
BSNT_04019___ 950 CTCGCGCGTACATTAGGCACTTGATTCGCTGCAATGAAACATTCGGCCTT 999
|.|||||.|||||.||.||.|||||.|||||.||||||||.||.||..||
RBAM_024820__ 950 CCCGCGCTTACATCAGACATTTGATCCGCTGTAATGAAACGTTTGGAATT 999
BSNT_04019___ 1000 CGATTAACAACTTACCATAACCTTCATTTTCTGTTACACTTAATGGAGCA 1049
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_024820__ 1000 CGATTAACAACTTACCATAACCTTCATTTTCTGTTACACTTAATGGAGCA 1049
BSNT_04019___ 1050 GGTAAGACAGGCTATTCGCGAGGATCGTCTGGGTGATTTCAGAGAAGAGT 1099
|||.|||||.||.||.||.|||||||||||.|||||||||.|||||||||
RBAM_024820__ 1050 GGTCAGACAAGCCATCCGGGAGGATCGTCTTGGTGATTTCCGAGAAGAGT 1099
BSNT_04019___ 1100 TCTTTGAGCGTTACGGCTATAACAAGCCAAATGCGAAAAGCTTCTAA 1146
||||||||||||||||||||||.||||||||||||||||||||||||
RBAM_024820__ 1100 TCTTTGAGCGTTACGGCTATAATAAGCCAAATGCGAAAAGCTTCTAA 1146
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