Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04015 and RBAM_024790
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:22
# Commandline: needle
# -asequence dna-align/BSNT_04015___yrbG.1.9828.seq
# -bsequence dna-align/RBAM_024790___yrbG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04015___yrbG-RBAM_024790___yrbG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04015___yrbG-RBAM_024790___yrbG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04015___yrbG
# 2: RBAM_024790___yrbG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 678
# Identity: 481/678 (70.9%)
# Similarity: 481/678 (70.9%)
# Gaps: 42/678 ( 6.2%)
# Score: 1621.5
#
#
#=======================================
BSNT_04015___ 1 ATGGAAGAGCTTCTCACTATTGCGTTTCGCACAGTCGTATTGTATTTTGT 50
||||||||..||.|||.||||.|||||||.||..|.||..|.||||||.|
RBAM_024790__ 1 ATGGAAGATATTTTCATTATTACGTTTCGTACGATTGTGCTTTATTTTAT 50
BSNT_04015___ 51 GATATTGGTCATTTTTCGTTTCATGGGCAAACGGGAGATCGGAGAGCTTA 100
.||..|.||.|||||..|..|.|||||.||||||||.||||||||.||.|
RBAM_024790__ 51 CATTCTTGTGATTTTCAGACTGATGGGAAAACGGGAAATCGGAGAACTGA 100
BSNT_04015___ 101 GTATTTTAGATCTCGTTGTCTTTATCATGATGGCTGAAATTGCCGTTTTA 150
|.||||||||.||.||.||||..||.|||||.||.||.||||||||.||.
RBAM_024790__ 101 GCATTTTAGACCTTGTCGTCTCCATTATGATTGCCGAGATTGCCGTATTG 150
BSNT_04015___ 151 GCCATAGAAAACGTAGACGATCATCTATTTCATACCATTTTGCCAATGCT 200
||.||.|||||.|||.|.|||.|.||.||.|||||.|||.||||.||..|
RBAM_024790__ 151 GCAATTGAAAATGTAAAAGATAAGCTTTTGCATACGATTGTGCCGATTGT 200
BSNT_04015___ 201 TGTATTAATGATCATTCAAGTGA-CTTTGGCATACTTTTCTT----TAAA 245
.||.||||||||.||||||||.| |.||| |||||.|| |.||
RBAM_024790__ 201 CGTTTTAATGATTATTCAAGTAAGCCTTG-----CTTTTATTTCGCTCAA 245
BSNT_04015___ 246 AAACCGAAAAGTCCGCCAGCTTCTTGACGGTAAGCCGACCATAATTATCA 295
||.||.||||.|.||.|||||.||||||||.||.||.|||||.|||||.|
RBAM_024790__ 246 AAGCCAAAAAATACGGCAGCTGCTTGACGGAAAACCCACCATTATTATAA 295
BSNT_04015___ 296 AATATGGAAAAATTGACGAAGAAGCCATGAAATCACAGCGATATAATTTT 345
||.|.|||||||||||.|||...||.||||.|||||||||.||.||||||
RBAM_024790__ 296 AACAGGGAAAAATTGATGAACGGGCGATGAGATCACAGCGCTACAATTTT 345
BSNT_04015___ 346 GATGAT----TTAATGGTTCAACTCAGAGAAAATAGCGTCGACAGAGTAG 391
||.||| ||| |.||.||.||.||.||||.|.||||.|||.|..
RBAM_024790__ 346 GACGATCTTCTTA----TGCAGCTGAGGGAGAATAACATCGATAGAATCT 391
BSNT_04015___ 392 CTGACGTATCATTTGCCATATTAGAGCCGTCGGGCAAACTGACTATTGT- 440
|||||||.||||.||||||.||.|||.|.||.|||||||||.|.||.||
RBAM_024790__ 392 CTGACGTGTCATATGCCATTTTGGAGTCTTCAGGCAAACTGTCGATCGTC 441
BSNT_04015___ 441 --AAAGAAAGAAAATAGCGGAGAGCATCGGCAGCTCGAAATGCCGCTCAT 488
|||||||.|.|||| ||.||..||||.|.||||...||||.||
RBAM_024790__ 442 AAAAAGAAAAACAATA------AGGATAAGCAGATGGAAACATCGCTTAT 485
BSNT_04015___ 489 TATAGACGGCTTCATTCA-AACAGAAAACCTGTCCAGAATCAGTAAAGAT 537
..|.|||||..||||||| ||| ||..|.|||..|||||||.|.||||||
RBAM_024790__ 486 CGTTGACGGGGTCATTCAGAAC-GAGCATCTGGACAGAATCGGGAAAGAT 534
BSNT_04015___ 538 AAAAAATGGCT-GCTTGAAAGTTTGCAAAAACACGGATA-CACAAACCCT 585
|||.|.||||| |....|||.||.|||||||.| ||||| |.| .|.|.|
RBAM_024790__ 535 AAACACTGGCTCGAAAAAAATTTAGCAAAAAGA-GGATATCGC-GATCTT 582
BSNT_04015___ 586 TCAGATATTTCATTTTGCTCGTTTACAGACGGAGAATTATTTATTGACGA 635
||.|.|||.|||||.|||.|||||||.|||||.|..||.||||||||...
RBAM_024790__ 583 TCGGTTATATCATTCTGCACGTTTACGGACGGCGCTTTTTTTATTGATCT 632
BSNT_04015___ 636 AAAAGAT------GGGTACCGCACGTGA 657
.|||||| |||.|.| |||||
RBAM_024790__ 633 TAAAGATGAAAAAGGGGAGC---CGTGA 657
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