Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04013 and RBAM_024770
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:22
# Commandline: needle
# -asequence dna-align/BSNT_04013___yrzD.1.9828.seq
# -bsequence dna-align/RBAM_024770___yrzD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04013___yrzD-RBAM_024770___yrzD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04013___yrzD-RBAM_024770___yrzD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04013___yrzD
# 2: RBAM_024770___yrzD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 299
# Identity: 245/299 (81.9%)
# Similarity: 245/299 (81.9%)
# Gaps: 4/299 ( 1.3%)
# Score: 985.0
#
#
#=======================================
BSNT_04013___ 1 GTGGAGAAGCATCCAGCCGATCTATATAAAGACCACGTCAGGCCGTTTCT 50
||||||||.|||||.|||||..|.||.|||||.||..|..|||| |||||
RBAM_024770__ 1 GTGGAGAAACATCCCGCCGAAATGTACAAAGATCATTTGCGGCC-TTTCT 49
BSNT_04013___ 51 T-TACAGCAAACTGGAAGAGTTTAAGATTCTCGGGTATGATGATGTTGAA 99
| |||||.|||||.||||||||.||.||.|||||.||.|||||||||||.
RBAM_024770__ 50 TGTACAGTAAACTTGAAGAGTTCAAAATCCTCGGATACGATGATGTTGAG 99
BSNT_04013___ 100 CTCGAAAGTTTGTGGTCATACTTAACAGATAAGAAGTGGAAAAAGAAAAC 149
|.|||.|||||.|||||||||||||.|.||||.|||||||||.||||||.
RBAM_024770__ 100 CACGAGAGTTTATGGTCATACTTAATACATAAAAAGTGGAAACAGAAAAA 149
BSNT_04013___ 150 GGAACTG-AGCATTTATGAACTGGCGAGTGATATTTTATCAGTGAAAATT 198
||||||| .|| |..|||||.||||..||.|||||||||||||.||||||
RBAM_024770__ 150 GGAACTGCCGC-TGCATGAATTGGCCGGTCATATTTTATCAGTTAAAATT 198
BSNT_04013___ 199 GGCGAATTTATGAACTATGCAACCGTTGAGTCATTTAAAACGTCTAATTG 248
|||||.|||||||||||||||||||||||..|.|||||..||||||||||
RBAM_024770__ 199 GGCGATTTTATGAACTATGCAACCGTTGAAGCTTTTAAGTCGTCTAATTG 248
BSNT_04013___ 249 GCTGGGCAGTGAAGAGGGCCAGGAAGCATTGGAAGAACTGCTGAGATAG 297
|||||..||.||.|||||.||||||||.||.||.||||||||||||||.
RBAM_024770__ 249 GCTGGAAAGCGATGAGGGTCAGGAAGCTTTAGATGAACTGCTGAGATAA 297
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