Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03994 and RBAM_024630

See Amino acid alignment / Visit BSNT_03994 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:18
# Commandline: needle
#    -asequence dna-align/BSNT_03994.1.9828.seq
#    -bsequence dna-align/RBAM_024630___yrzC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03994-RBAM_024630___yrzC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03994-RBAM_024630___yrzC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03994
# 2: RBAM_024630___yrzC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 420
# Identity:     336/420 (80.0%)
# Similarity:   336/420 (80.0%)
# Gaps:           3/420 ( 0.7%)
# Score: 1356.0
# 
#
#=======================================

BSNT_03994         1 ATGTTGAAAATATCAACTAAGGGAAGATACGGGCTCACCATTATGATCGA     50
                        |||||||||||.||.|||||||||||||||||||||||||||||.||
RBAM_024630__      1 ---TTGAAAATATCGACAAAGGGAAGATACGGGCTCACCATTATGATTGA     47

BSNT_03994        51 GCTTGCAAAAAAGCACGGTGAAGGCCCGACTTCATTAAAAAGCATCGCAC    100
                     ..|.||.|||||||||||.||.||.|||||.||..|.|||||||||||.|
RBAM_024630__     48 ATTGGCGAAAAAGCACGGAGACGGTCCGACGTCGCTCAAAAGCATCGCCC     97

BSNT_03994       101 AGACGAATAATTTGTCCGAGCATTATTTGGAGCAGCTGGTATCGCCGCTC    150
                     |.||.||.|...|.||.||||||||.|||||.|||||.|||||.||||||
RBAM_024630__     98 AAACAAACAGCCTTTCTGAGCATTACTTGGAACAGCTTGTATCACCGCTC    147

BSNT_03994       151 AGAAATGCCGGTTTAGTGAAAAGCATCAGAGGCGCATATGGCGGATATGT    200
                     |||||.|||||..|.||.|||||||||||||||||.||.||.||.||.||
RBAM_024630__    148 AGAAACGCCGGACTTGTAAAAAGCATCAGAGGCGCTTACGGGGGGTACGT    197

BSNT_03994       201 ATTAGGCAGTGAGCCGGATGCCATTACCGCGGGAGATATTATCCGTGTGC    250
                     ..|.||..|..||||.||.|..||.||.||.||||||||||||.|.||||
RBAM_024630__    198 GCTCGGGGGCCAGCCTGAAGAGATAACGGCCGGAGATATTATCAGAGTGC    247

BSNT_03994       251 TTGAGGGGCCGATCAGCCCTGTTGAAGTGCTGGAAGATGAGGAGCCTGCC    300
                     |.||.||||||||||||||.||.||||||||.||.|||||.|||||||||
RBAM_024630__    248 TGGAAGGGCCGATCAGCCCGGTAGAAGTGCTTGAGGATGAAGAGCCTGCC    297

BSNT_03994       301 AAGCGTGAGCTCTGGATTCGCATCCGGGATGCTGTAAAAGAGGTTTTAGA    350
                     |||||.|||.|.|||||.||||||||.||.|||||||||||.||..|.||
RBAM_024630__    298 AAGCGGGAGTTATGGATCCGCATCCGCGACGCTGTAAAAGACGTGCTGGA    347

BSNT_03994       351 CAGTACAACATTAGAGGATCTTGCCAGCTATACAGACGGAGAGCAAGAAG    400
                     |||.||.||.|||||.||.|||||.|||||.||.|||||.|||||.||||
RBAM_024630__    348 CAGCACGACGTTAGAAGACCTTGCGAGCTACACGGACGGCGAGCAGGAAG    397

BSNT_03994       401 CTTATATGTTCTATATTTAG    420
                     |||||||||||||||||||.
RBAM_024630__    398 CTTATATGTTCTATATTTAA    417


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