Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03994 and RBAM_024630
See
Amino acid alignment /
Visit
BSNT_03994 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:18
# Commandline: needle
# -asequence dna-align/BSNT_03994.1.9828.seq
# -bsequence dna-align/RBAM_024630___yrzC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03994-RBAM_024630___yrzC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03994-RBAM_024630___yrzC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03994
# 2: RBAM_024630___yrzC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 420
# Identity: 336/420 (80.0%)
# Similarity: 336/420 (80.0%)
# Gaps: 3/420 ( 0.7%)
# Score: 1356.0
#
#
#=======================================
BSNT_03994 1 ATGTTGAAAATATCAACTAAGGGAAGATACGGGCTCACCATTATGATCGA 50
|||||||||||.||.|||||||||||||||||||||||||||||.||
RBAM_024630__ 1 ---TTGAAAATATCGACAAAGGGAAGATACGGGCTCACCATTATGATTGA 47
BSNT_03994 51 GCTTGCAAAAAAGCACGGTGAAGGCCCGACTTCATTAAAAAGCATCGCAC 100
..|.||.|||||||||||.||.||.|||||.||..|.|||||||||||.|
RBAM_024630__ 48 ATTGGCGAAAAAGCACGGAGACGGTCCGACGTCGCTCAAAAGCATCGCCC 97
BSNT_03994 101 AGACGAATAATTTGTCCGAGCATTATTTGGAGCAGCTGGTATCGCCGCTC 150
|.||.||.|...|.||.||||||||.|||||.|||||.|||||.||||||
RBAM_024630__ 98 AAACAAACAGCCTTTCTGAGCATTACTTGGAACAGCTTGTATCACCGCTC 147
BSNT_03994 151 AGAAATGCCGGTTTAGTGAAAAGCATCAGAGGCGCATATGGCGGATATGT 200
|||||.|||||..|.||.|||||||||||||||||.||.||.||.||.||
RBAM_024630__ 148 AGAAACGCCGGACTTGTAAAAAGCATCAGAGGCGCTTACGGGGGGTACGT 197
BSNT_03994 201 ATTAGGCAGTGAGCCGGATGCCATTACCGCGGGAGATATTATCCGTGTGC 250
..|.||..|..||||.||.|..||.||.||.||||||||||||.|.||||
RBAM_024630__ 198 GCTCGGGGGCCAGCCTGAAGAGATAACGGCCGGAGATATTATCAGAGTGC 247
BSNT_03994 251 TTGAGGGGCCGATCAGCCCTGTTGAAGTGCTGGAAGATGAGGAGCCTGCC 300
|.||.||||||||||||||.||.||||||||.||.|||||.|||||||||
RBAM_024630__ 248 TGGAAGGGCCGATCAGCCCGGTAGAAGTGCTTGAGGATGAAGAGCCTGCC 297
BSNT_03994 301 AAGCGTGAGCTCTGGATTCGCATCCGGGATGCTGTAAAAGAGGTTTTAGA 350
|||||.|||.|.|||||.||||||||.||.|||||||||||.||..|.||
RBAM_024630__ 298 AAGCGGGAGTTATGGATCCGCATCCGCGACGCTGTAAAAGACGTGCTGGA 347
BSNT_03994 351 CAGTACAACATTAGAGGATCTTGCCAGCTATACAGACGGAGAGCAAGAAG 400
|||.||.||.|||||.||.|||||.|||||.||.|||||.|||||.||||
RBAM_024630__ 348 CAGCACGACGTTAGAAGACCTTGCGAGCTACACGGACGGCGAGCAGGAAG 397
BSNT_03994 401 CTTATATGTTCTATATTTAG 420
|||||||||||||||||||.
RBAM_024630__ 398 CTTATATGTTCTATATTTAA 417
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.