Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03985 and RBAM_024560
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:17
# Commandline: needle
# -asequence dna-align/BSNT_03985___glnP.1.9828.seq
# -bsequence dna-align/RBAM_024560___glnP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03985___glnP-RBAM_024560___glnP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03985___glnP-RBAM_024560___glnP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03985___glnP
# 2: RBAM_024560___glnP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 665
# Identity: 511/665 (76.8%)
# Similarity: 511/665 (76.8%)
# Gaps: 16/665 ( 2.4%)
# Score: 1919.0
#
#
#=======================================
BSNT_03985___ 1 TTGGATTTCATCGGTGCTTATTCACAGGAGCATTTAGC-GTTTTTATGGG 49
.|||||||.|.|||.||.|||.|||..||.|||.| || |||||||||||
RBAM_024560__ 1 ATGGATTTTAGCGGCGCCTATACACCTGACCATCT-GCTGTTTTTATGGG 49
BSNT_03985___ 50 ATGGCTTTCTCGTCAC-CTTGTACGTTGCTTTCATCTCCATCATTCTGAG 98
|.||||||.|.||||| ||| ||.|||||..|.||||||||..|.|||||
RBAM_024560__ 50 ACGGCTTTTTGGTCACACTT-TATGTTGCGCTGATCTCCATTGTCCTGAG 98
BSNT_03985___ 99 CTTTTTCTTCGGTTTAATCGCAGGCACCCTGCGATATGCGAAAGTACC-- 146
.|||.|.|||||..|...|||.|||||..||||.|||||||||.|.||
RBAM_024560__ 99 TTTTATTTTCGGGCTTGCCGCCGGCACTTTGCGCTATGCGAAAATTCCTA 148
BSNT_03985___ 147 -CGTTCTTTCTC---AATTGATTGCGGTTCTCGTTGAAACGATCAGAAAC 192
|| |||| .||| ||.||||...|.||.|||||.|||.|.|||
RBAM_024560__ 149 TCG-----TCTCGGGCATT-ATAGCGGCCATTGTGGAAACCATCCGCAAC 192
BSNT_03985___ 193 CTCCCCTTGCTGTTAATTATTTTCTTTACGTTTTTTGCCCTTCCGGAAAT 242
||.||..||.|.|||||.||||||||||||||||||||||||||||||||
RBAM_024560__ 193 CTGCCGCTGTTATTAATCATTTTCTTTACGTTTTTTGCCCTTCCGGAAAT 242
BSNT_03985___ 243 TGGTATTAAGCTTGAAATTACAGCTGCTGCAATTACAGCACTAACGATTT 292
.||.||.||.||.||||||||.||.||.||.|||||.||.||.|||||||
RBAM_024560__ 243 CGGGATCAAACTGGAAATTACCGCGGCCGCCATTACGGCGCTGACGATTT 292
BSNT_03985___ 293 TTGAATCCGCTATGCTATCTGAAATTATCCGAAGCGGACTGAAATCAATT 342
|||||||.||.|||||.||.|||||.|||.|||||||..||.||||..||
RBAM_024560__ 293 TTGAATCGGCCATGCTGTCAGAAATCATCAGAAGCGGTTTGCAATCCGTT 342
BSNT_03985___ 343 GACAAAGGACAAATTGAAGCGGCGCGCTCCTCCGGGCTGAGCTATACACA 392
|||||||||||.|||||||||||.||.||.||.||.||||..||.||.||
RBAM_024560__ 343 GACAAAGGACAGATTGAAGCGGCACGTTCTTCAGGACTGACGTACACGCA 392
BSNT_03985___ 393 GACCCTGTTCTTTATCGTTATGCCGCAAGCGCTTCGCCGCATGGTTCCGC 442
|||.||.||..|..||||.||||||||.|||||..|.||.||||||||.|
RBAM_024560__ 393 GACTCTTTTTCTCGTCGTCATGCCGCAGGCGCTCAGGCGTATGGTTCCTC 442
BSNT_03985___ 443 CCATCGTAAGCCAGTTTATTTCTTTATTAAAAGATACATCGCTCGCTGTT 492
|.||.||.|||||||||||.||.||||||||.|||||.||.||.||.||.
RBAM_024560__ 443 CGATTGTGAGCCAGTTTATCTCCTTATTAAAGGATACGTCACTTGCGGTC 492
BSNT_03985___ 493 GTGATCGCCCTGCCTGAACTGATTCACAACGCGCAAATTATTAACGGCCA 542
||.|||||.|||||.|||||||||||.||||||||.|||.|.|||||.||
RBAM_024560__ 493 GTCATCGCTCTGCCCGAACTGATTCATAACGCGCAGATTTTAAACGGACA 542
BSNT_03985___ 543 AAGCGCAGACGGCAGTTATTTTTTCCCGATCTTTTTACTTGCGGCCCTTA 592
||||||.|||||..|.||||||||||||||||||.|.||.||||||||.|
RBAM_024560__ 543 AAGCGCTGACGGGGGATATTTTTTCCCGATCTTTCTGCTGGCGGCCCTGA 592
BSNT_03985___ 593 TGTATTTCGCAGTCAACTACAGCCTTTCACTCGCAGCAAGACGCCTCGAG 642
||||||||||.|||||.|||.||||.||.||||||||.|||||.||.||.
RBAM_024560__ 593 TGTATTTCGCGGTCAATTACTGCCTGTCTCTCGCAGCCAGACGGCTGGAA 642
BSNT_03985___ 643 GTCCGGCAAACATAG 657
|...|.|||||.||.
RBAM_024560__ 643 GCGAGACAAACGTAA 657
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