Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03974 and RBAM_024480

See Amino acid alignment / Visit BSNT_03974 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:16
# Commandline: needle
#    -asequence dna-align/BSNT_03974___yrzB.1.9828.seq
#    -bsequence dna-align/RBAM_024480___yrzB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03974___yrzB-RBAM_024480___yrzB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03974___yrzB-RBAM_024480___yrzB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03974___yrzB
# 2: RBAM_024480___yrzB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 284
# Identity:     230/284 (81.0%)
# Similarity:   230/284 (81.0%)
# Gaps:           4/284 ( 1.4%)
# Score: 910.0
# 
#
#=======================================

BSNT_03974___      1 ATGGAACACGGCGAAAAAAATATTACAATTGTTGACGATCAAGGAAATGA     50
                     ||||||||||||||||||.|.|||||||||||.||.||||||||.||.||
RBAM_024480__      1 ATGGAACACGGCGAAAAACACATTACAATTGTCGATGATCAAGGCAACGA     50

BSNT_03974___     51 ACAGCTTTGTGAAGTGCTGTTTACATTTGAAAACGA-AGAGTTTGGCAAG     99
                     |||||||||.|||||||||||.|||||||||||||| |.| ||...|||.
RBAM_024480__     51 ACAGCTTTGCGAAGTGCTGTTCACATTTGAAAACGACACA-TTCAACAAA     99

BSNT_03974___    100 TCTTATGT-CTTGTACTATCCAATCGAATCAAAAGATGACGAGGAAGTAG    148
                     |||||.|| ||| ||.|||||.||.||..|..||||.||.||.|||.|.|
RBAM_024480__    100 TCTTACGTACTT-TATTATCCGATTGATGCTCAAGACGATGATGAAATCG    148

BSNT_03974___    149 AAATTCTTGCTTCCAGCTTCACGCCAAACGAAGACGGTGAAAACGGTGAG    198
                     ||||||..|||||.||||||...||.||||||.|.||||||.||||.||.
RBAM_024480__    149 AAATTCACGCTTCAAGCTTCGAACCGAACGAAAATGGTGAAGACGGCGAA    198

BSNT_03974___    199 CTATTCCCGATTGAAACTGACGAAGAATGGGATATGATCGAAGAAACACT    248
                     ||..|.|||||||||||.||.|||||.|||||.||||||||||||||.||
RBAM_024480__    199 CTGATGCCGATTGAAACCGATGAAGAGTGGGAAATGATCGAAGAAACGCT    248

BSNT_03974___    249 AAACACATTCTTAGCGGACGAAGACGAAGAATAA    282
                     .|||||.||.||||||||.|||||||||||||||
RBAM_024480__    249 GAACACGTTTTTAGCGGAAGAAGACGAAGAATAA    282


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