Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03968 and RBAM_024430
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:15
# Commandline: needle
# -asequence dna-align/BSNT_03968___udk.1.9828.seq
# -bsequence dna-align/RBAM_024430___udk.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03968___udk-RBAM_024430___udk.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03968___udk-RBAM_024430___udk.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03968___udk
# 2: RBAM_024430___udk
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 636
# Identity: 549/636 (86.3%)
# Similarity: 549/636 (86.3%)
# Gaps: 0/636 ( 0.0%)
# Score: 2397.0
#
#
#=======================================
BSNT_03968___ 1 ATGGGTAAGAATCCAGTAGTCATTGGAATCGCAGGAGGTTCCGGTTCAGG 50
||||||||||.|||.|||||.||.||.|||||||||||||||||.|||||
RBAM_024430__ 1 ATGGGTAAGAGTCCTGTAGTTATAGGCATCGCAGGAGGTTCCGGATCAGG 50
BSNT_03968___ 51 AAAAACGAGTGTCACACGGTCCATTTATGAACAGTTTAAAGGACACTCAA 100
||||||.||.|||||.||.|||||.|||||||||||||||||||||||.|
RBAM_024430__ 51 AAAAACAAGCGTCACCCGTTCCATCTATGAACAGTTTAAAGGACACTCGA 100
BSNT_03968___ 101 TTTTAATGATCCAGCAGGACCTTTATTATAAAGACCAAAGCCATCTTCCG 150
||||||||||||||||.|||||||||||||||||||||||||||||||||
RBAM_024430__ 101 TTTTAATGATCCAGCAAGACCTTTATTATAAAGACCAAAGCCATCTTCCG 150
BSNT_03968___ 151 TTTGAAGAAAGGCTGAACACAAACTACGATCATCCGCTTGCGTTTGATAA 200
||||||||||||||||||||||||||.|||||.|||||.||.||||||||
RBAM_024430__ 151 TTTGAAGAAAGGCTGAACACAAACTATGATCACCCGCTCGCATTTGATAA 200
BSNT_03968___ 201 TGACTATTTAATCGAGCATATTCAGGATCTATTGAATTACCGCCCGATTG 250
||||||||||||||||||||||||.||.||.|||||||||||.|||||.|
RBAM_024430__ 201 TGACTATTTAATCGAGCATATTCAAGAGCTTTTGAATTACCGGCCGATAG 250
BSNT_03968___ 251 AAAAGCCGATTTATGACTATAAGCTTCACACACGTTCAGAAGAAACGGTT 300
||||||||||||||||.|||||.||.||.||.|||||.||.|||||..||
RBAM_024430__ 251 AAAAGCCGATTTATGATTATAAACTGCATACGCGTTCTGAGGAAACCATT 300
BSNT_03968___ 301 CACGTAGAGCCAAAGGATGTTATTATCCTTGAAGGCATTCTTGTTCTTGA 350
|..||.|||||.||||||||.|||||.||.|||||||||||.|||||.||
RBAM_024430__ 301 CCGGTTGAGCCGAAGGATGTCATTATTCTGGAAGGCATTCTCGTTCTCGA 350
BSNT_03968___ 351 AGACAAAAGGCTTCGTGATCTGATGGATATCAAGCTTTATGTTGATACGG 400
|||.|||||.|||||.||.||.||||||||.||.||||||||.||.||||
RBAM_024430__ 351 AGATAAAAGACTTCGCGACCTCATGGATATGAAACTTTATGTCGACACGG 400
BSNT_03968___ 401 ACGCTGACTTGCGTATCATCAGACGGATTATGAGAGATATTAATGAGCGC 450
||||.||..|.||||||||||||||||||||||||||||||||.||..|.
RBAM_024430__ 401 ACGCGGATCTCCGTATCATCAGACGGATTATGAGAGATATTAACGAAAGA 450
BSNT_03968___ 451 GGACGCTCTATTGATTCTGTCATTGAACAATATGTGTCAGTGGTCCGTCC 500
||.|||||.||.||||||||||||||.||.||||||||.||.|||.|.||
RBAM_024430__ 451 GGCCGCTCGATCGATTCTGTCATTGAGCAGTATGTGTCCGTCGTCAGACC 500
BSNT_03968___ 501 GATGCATAACCAATTCGTCGAGCCGACGAAACGATACGCTGATATTATTA 550
||||||.||.||.||.||.||.|||||||||||.|||||.||.||.||||
RBAM_024430__ 501 GATGCACAATCAGTTTGTTGAACCGACGAAACGCTACGCGGACATCATTA 550
BSNT_03968___ 551 TCCCGGAAGGCGGTCAGAATCACGTCGCAATTGATCTGATGGTCACAAAA 600
|.|||||||||||.||.||.||||||||.|||||||||||||||||.||.
RBAM_024430__ 551 TTCCGGAAGGCGGACAAAACCACGTCGCGATTGATCTGATGGTCACGAAG 600
BSNT_03968___ 601 ATTCAAACCATTCTTGAACAAAACGCGATTTTGTAA 636
||||||||.||.|||||||||||.||.|||||||||
RBAM_024430__ 601 ATTCAAACGATCCTTGAACAAAATGCAATTTTGTAA 636
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