Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03962 and RBAM_024390
See
Amino acid alignment /
Visit
BSNT_03962 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:15
# Commandline: needle
# -asequence dna-align/BSNT_03962___yrzA.1.9828.seq
# -bsequence dna-align/RBAM_024390___yrzA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03962___yrzA-RBAM_024390___yrzA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03962___yrzA-RBAM_024390___yrzA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03962___yrzA
# 2: RBAM_024390___yrzA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 207
# Identity: 152/207 (73.4%)
# Similarity: 152/207 (73.4%)
# Gaps: 6/207 ( 2.9%)
# Score: 542.0
#
#
#=======================================
BSNT_03962___ 1 ATGAATTTTCAATTAGATCTGATTAAAGACAAAGTGGAATTTTTTGAAGC 50
||||||||||||||.|||.|.||.|||||.|||||.||||||||.|||||
RBAM_024390__ 1 ATGAATTTTCAATTGGATTTAATCAAAGATAAAGTAGAATTTTTCGAAGC 50
BSNT_03962___ 51 GGCTTCATTGCAAGAGCTTGAAAAGAAAATCAATACACAAATTGAAAACA 100
|||.||.|||||.|||||||||||||||||.||....||.||||||||||
RBAM_024390__ 51 GGCATCTTTGCAGGAGCTTGAAAAGAAAATAAACGTTCAGATTGAAAACA 100
BSNT_03962___ 101 ATAAAGCCATCATGCTCCGGGTGAAATCTGTTTCACACCA---AACTGCT 147
|..|.||.||.|||||.||.||....||.||.||.||.|| .||.||.
RBAM_024390__ 101 ACCAGGCGATTATGCTTCGCGTCCGTTCCGTATCCCATCAGGTGACGGCC 150
BSNT_03962___ 148 GTGGCAGAAGGAAGAATATTGTACAGCGCGGTGGTTCATTTCGCAGCTGA 197
|| .||.||.|||||..|.|||||||||..|||.|||||..|||||||
RBAM_024390__ 151 GT---TGACGGCAGAATCCTTTACAGCGCGTCGGTGCATTTTTCAGCTGA 197
BSNT_03962___ 198 AGCCTAA 204
.|..|.|
RBAM_024390__ 198 CGTATGA 204
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.