Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03949 and RBAM_024310
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:13
# Commandline: needle
# -asequence dna-align/BSNT_03949___yrhF.1.9828.seq
# -bsequence dna-align/RBAM_024310___yrhF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03949___yrhF-RBAM_024310___yrhF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03949___yrhF-RBAM_024310___yrhF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03949___yrhF
# 2: RBAM_024310___yrhF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 370
# Identity: 303/370 (81.9%)
# Similarity: 303/370 (81.9%)
# Gaps: 2/370 ( 0.5%)
# Score: 1245.0
#
#
#=======================================
BSNT_03949___ 1 ATGTCTAAAAAAATTCACGAATTCAATGATATCATTCGAAAACTTCGCAA 50
|||||||||||||||||.|||||.||.|||||.||.||.|||.|.|||||
RBAM_024310__ 1 ATGTCTAAAAAAATTCATGAATTTAACGATATTATCCGGAAATTGCGCAA 50
BSNT_03949___ 51 AGAATTGTTCGGAAAAGGGCCTGAGAGAATTCATACTGTATTTGTAGAAA 100
||||||.||.|||||.||||||||..|||||||.||.||.|||||.||.|
RBAM_024310__ 51 AGAATTATTTGGAAAGGGGCCTGAACGAATTCACACCGTTTTTGTGGATA 100
BSNT_03949___ 101 ACATGGCAGTTTCAACACTGTACGGAAATCTGAGTGCAAGCGAGCAGTTT 150
|||||||.||.||.||.||.|||||.|||||.||.|||||.|||||||||
RBAM_024310__ 101 ACATGGCGGTATCTACGCTTTACGGCAATCTAAGCGCAAGTGAGCAGTTT 150
BSNT_03949___ 151 ATCGCCCGCACGCCTGAAGGAAGAGAGATGGTGCATGCGGCCCGGACAAG 200
|||||.||||||||||||||||||||||||||.||||||||.||.||.||
RBAM_024310__ 151 ATCGCACGCACGCCTGAAGGAAGAGAGATGGTTCATGCGGCGCGAACCAG 200
BSNT_03949___ 201 CTTGATTCAAGACCTTTATTCCAAACAAACGCCGGAAGGAATGGAGGAAC 250
|||.|||||.||.||.|||||.|||||||||||.||.||||||||.||.|
RBAM_024310__ 201 CTTAATTCAGGAACTGTATTCAAAACAAACGCCTGACGGAATGGAAGAGC 250
BSNT_03949___ 251 TCATGGGAGCTAAGCTAGTCCATTTGTTTTCTGATATTAAAATTGAGGAA 300
||||.|||||.|||||.||.|||.|||||||.|||||||||||.||||||
RBAM_024310__ 251 TCATCGGAGCAAAGCTTGTGCATCTGTTTTCAGATATTAAAATAGAGGAA 300
BSNT_03949___ 301 AACATCGCTGTATCTGTATTTGTTTTTGACCGAAAAATAGATGAGCAAAA 350
||.||.||.|||||.||.|||||.||||||||...|||.||.|||||.||
RBAM_024310__ 301 AATATTGCCGTATCGGTGTTTGTCTTTGACCGCTCAATTGAAGAGCATAA 350
BSNT_03949___ 351 AGAAGTTCTGCAAAGCTAG- 369
|||||...|..|||||| |
RBAM_024310__ 351 AGAAGAAATCAAAAGCT-GA 369
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