Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03944 and RBAM_024290
See
Amino acid alignment /
Visit
BSNT_03944 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:13
# Commandline: needle
# -asequence dna-align/BSNT_03944___yrzI.1.9828.seq
# -bsequence dna-align/RBAM_024290___yrzI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03944___yrzI-RBAM_024290___yrzI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03944___yrzI-RBAM_024290___yrzI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03944___yrzI
# 2: RBAM_024290___yrzI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 151
# Identity: 104/151 (68.9%)
# Similarity: 104/151 (68.9%)
# Gaps: 11/151 ( 7.3%)
# Score: 366.0
#
#
#=======================================
BSNT_03944___ 1 ATGACGATTAACCTATTCTTTTTAACGTTAACGATTAAAAAACGGTTTAA 50
|||||.|||||.||.|||||||||||..|.||.|||..|||.||.|||||
RBAM_024290__ 1 ATGACCATTAATCTTTTCTTTTTAACACTGACCATTTCAAAGCGTTTTAA 50
BSNT_03944___ 51 AAGCCTGGAAGAATTCGAACGAGAACAGCAGATTGAGCAGATTTATGATG 100
|||...||||||.|..|||||||||||||||.|.||..||.|||||.|||
RBAM_024290__ 51 AAGTGCGGAAGAGTATGAACGAGAACAGCAGGTCGAAGAGTTTTATAATG 100
BSNT_03944___ 101 AAATGAAAGAGTCTCAGTTAAAGCATCTTTAT-TTAACAAACTGGCGTTA 149
||..||||||....|||.|.||.||..||||| |.|||.||
RBAM_024290__ 101 AAGCGAAAGAACGCCAGCTGAAACACTTTTATATGAACTAA--------- 141
BSNT_03944___ 150 A 150
RBAM_024290__ 141 - 141
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.