Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02036 and RBAM_024200
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:45
# Commandline: needle
# -asequence dna-align/BSNT_02036___manP.1.9828.seq
# -bsequence dna-align/RBAM_024200___manP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02036___manP-RBAM_024200___manP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02036___manP-RBAM_024200___manP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02036___manP
# 2: RBAM_024200___manP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1965
# Identity: 1618/1965 (82.3%)
# Similarity: 1618/1965 (82.3%)
# Gaps: 18/1965 ( 0.9%)
# Score: 6698.5
#
#
#=======================================
BSNT_02036___ 1 ATGAAACTGTTAGCGATTACATCTTGTCCGAATGGAATCGCCCATACGTA 50
|||||||||||||||||||||||.||||||||.||.||.|||||||||||
RBAM_024200__ 1 ATGAAACTGTTAGCGATTACATCATGTCCGAACGGCATTGCCCATACGTA 50
BSNT_02036___ 51 TATGGCAGCGGAAAATCTGCAAAAAGCTGCTGACAGACTGGGCGTT-AGC 99
||||||.||.||||||.|.||||||||.||.|.||||.|.|||||| ||
RBAM_024200__ 51 TATGGCTGCTGAAAATTTACAAAAAGCAGCCGGCAGATTAGGCGTTGAG- 99
BSNT_02036___ 100 ATCAAAGTTGAGACCCAGGGGGGAATTGGTGTCGAAAATAAGCTAACCGA 149
||||||||.||.||||||||||||||.||.||.|||||||.|||.|||||
RBAM_024200__ 100 ATCAAAGTGGAAACCCAGGGGGGAATCGGGGTGGAAAATAGGCTGACCGA 149
BSNT_02036___ 150 AGAGGAAATTCGCGAAGCGGACGCAATCATTATTGCTGCAGACCGCTCGG 199
|||||||||.||.|||||.||||||||||||||.||.||.|||||.||||
RBAM_024200__ 150 AGAGGAAATCCGGGAAGCAGACGCAATCATTATCGCGGCGGACCGTTCGG 199
BSNT_02036___ 200 TAAACAAAGACCGGTTTATAGGCAAAAAACTGCTGTCTGTGGGGGTACAG 249
|.|||||||||||.||....||.|||||.||||||.|.||.|||||.|||
RBAM_024200__ 200 TGAACAAAGACCGATTCGCGGGAAAAAAGCTGCTGGCCGTCGGGGTTCAG 249
BSNT_02036___ 250 GACGGCATCCGCAAACCGGAAGAATTGATTCAAAAAGCTCTTAACGGGGA 299
||.|||||||||||||||||||||||.|||||||||||.||||.|.|.||
RBAM_024200__ 250 GAAGGCATCCGCAAACCGGAAGAATTAATTCAAAAAGCGCTTAGCAGTGA 299
BSNT_02036___ 300 TATACCGGTCTATCGTTCCGCTACAAAATCGGAGCCCGGTAATCATCAGG 349
..|.||||||||||..||.|||.|||||.|.||..|||..|.|||.||||
RBAM_024200__ 300 AGTGCCGGTCTATCAATCTGCTTCAAAAGCTGAATCCGCAAGTCAGCAGG 349
BSNT_02036___ 350 AGAAGAAACAAAATCCAATTTACCGTCATTTAATGAACGGCGTTTCATTT 399
..||.||||||||.||.|||||||||||||||||||||||||||||.|||
RBAM_024200__ 350 GCAAAAAACAAAACCCGATTTACCGTCATTTAATGAACGGCGTTTCTTTT 399
BSNT_02036___ 400 ATGGTTCCTTTCATTGTTGTCGGCGGATTATTGATAGCGGTTGCATTAAC 449
|||||||||||||||||.|||||||||||||||||||||||||||||.||
RBAM_024200__ 400 ATGGTTCCTTTCATTGTCGTCGGCGGATTATTGATAGCGGTTGCATTGAC 449
BSNT_02036___ 450 GCTTGGAGGGGAGAAAACACCTAAAGGCTTAGTTATTCCGGATGATTCCT 499
|||||||||.||.||||||||.||.||||||||.||||||||.||.||.|
RBAM_024200__ 450 GCTTGGAGGAGAAAAAACACCAAAGGGCTTAGTCATTCCGGACGAGTCTT 499
BSNT_02036___ 500 TCTGGAAAACGATTGAACAGATCGGCAGTGCTTCATTTTCATTTATGATT 549
|.|||||.||||||||||||||||||||||||||.||||||||.|||||.
RBAM_024200__ 500 TTTGGAAGACGATTGAACAGATCGGCAGTGCTTCTTTTTCATTCATGATC 549
BSNT_02036___ 550 CCGATTTTAGCCGGCTATATCGCCTATAGCATCGCTGATAAACCGGGGCT 599
||||||||||||||.||||||||.|..||||||||||||||.||||||||
RBAM_024200__ 550 CCGATTTTAGCCGGGTATATCGCGTTCAGCATCGCTGATAAGCCGGGGCT 599
BSNT_02036___ 600 TGTGCCAGGGATGATCGGCGGTTATATTGCGGCGACTGGAAGTTTTTATG 649
|||.||.||.|||||||||||.|||||||||||..|.||.||.|||||.|
RBAM_024200__ 600 TGTCCCCGGAATGATCGGCGGATATATTGCGGCATCCGGCAGCTTTTACG 649
BSNT_02036___ 650 ACAGCGCAAGCGGCGCCGGATTCCTCGGGGGGATTATTGCCGGGTTTTTG 699
||||.|||||||||||.|||||.||.||.||.||.|||||.||.||||||
RBAM_024200__ 650 ACAGTGCAAGCGGCGCAGGATTTCTTGGAGGAATCATTGCGGGATTTTTG 699
BSNT_02036___ 700 GCCGGATACGCGGCACTTTGGATCAAAAAATTAAAAGTTCCAAAAGCCAT 749
||.|||||.|||||.|||.|.||||||||||..||||||||.|||||.||
RBAM_024200__ 700 GCGGGATATGCGGCGCTTGGAATCAAAAAATGTAAAGTTCCTAAAGCAAT 749
BSNT_02036___ 750 CCAGCCGATTATGCCGATTATTATTATTCCGGTGTTTGCATCACTGATTG 799
.|||||||||||||||||.||||||||||||||||||||.||||||||.|
RBAM_024200__ 750 ACAGCCGATTATGCCGATCATTATTATTCCGGTGTTTGCCTCACTGATCG 799
BSNT_02036___ 800 TAGGTTTAGCGTTTGTATTTTTGATAGGCGCGCCTGTAGCTCAAATTTTC 849
|.|||||.||||||||.|||.||||.|||||.||.||.|||||.||||||
RBAM_024200__ 800 TCGGTTTGGCGTTTGTCTTTCTGATCGGCGCCCCCGTCGCTCATATTTTC 849
BSNT_02036___ 850 GCCTCTTTAACAGTTTGGCTGGCGGGGATGAAAGGGTCGAGCTCGATCCT 899
||.||.|||||.||||||||.|||||.||||||||.|||||.||.||.||
RBAM_024200__ 850 GCATCATTAACGGTTTGGCTTGCGGGAATGAAAGGTTCGAGTTCAATTCT 899
BSNT_02036___ 900 TCTGGCATTGATTTTAGGAGCGATGATCTCATTTGATATGGGCGGTCCCG 949
||||||||||||||||||||||||||||||.|||||||||||.||.||||
RBAM_024200__ 900 TCTGGCATTGATTTTAGGAGCGATGATCTCCTTTGATATGGGAGGACCCG 949
BSNT_02036___ 950 TAAATAAGGTGGCGTTTCTGTTTGGATCGGCAATGATTGGAGAAGGGAAT 999
||||.||||||||.|||||.||.||||||||||||||.||||||||.|||
RBAM_024200__ 950 TAAACAAGGTGGCCTTTCTTTTCGGATCGGCAATGATCGGAGAAGGAAAT 999
BSNT_02036___ 1000 TATGAAATTATGGGACCAATTGCTGCCGCCATTTGTATCCCCCCGATTGG 1049
||||||||.|||||.||.|||||.|...||||||||||.||.|||||.||
RBAM_024200__ 1000 TATGAAATCATGGGCCCGATTGCCGTTTCCATTTGTATACCGCCGATAGG 1049
BSNT_02036___ 1050 CCTTGGCATTGCGACGTTTTTAGGAAAAAGAAAATTCGAGGCATCTCAAA 1099
.|||||.|||||.|||||||||||||||||||||||||..||..|..|||
RBAM_024200__ 1050 GCTTGGGATTGCAACGTTTTTAGGAAAAAGAAAATTCGCCGCCGCAGAAA 1099
BSNT_02036___ 1100 GAGAAATGGGGAAAGCGGCATTTACGATGGGTCTTTTCGGCATTACTGAA 1149
.|||||||||.|||||..|||||||||||||.||||||||.||.||.|||
RBAM_024200__ 1100 AAGAAATGGGAAAAGCATCATTTACGATGGGCCTTTTCGGTATCACGGAA 1149
BSNT_02036___ 1150 GGAGCGATTCCATTTGCGGCGCAGGACCCTCTGCGCGTTATTCCAAGTAT 1199
|||||.||||||||||||||.||.|||||.||.||.||.||.||.|||||
RBAM_024200__ 1150 GGAGCCATTCCATTTGCGGCCCAAGACCCCCTTCGTGTGATCCCGAGTAT 1199
BSNT_02036___ 1200 TATGGCAGGCTCAATGACAGGTTCTGTGATAGCCATGATTGGCAATGTGG 1249
||||||.||.||.|||||.||.||.||||||||.|||||.|||.||||||
RBAM_024200__ 1200 TATGGCGGGTTCTATGACCGGATCGGTGATAGCGATGATCGGCCATGTGG 1249
BSNT_02036___ 1250 GAGACAGAGTGGCGCACGGCGGACCTATCGTTGCAGTGCTTGGCGCAGTT 1299
|.|||||||||||.||||||||.||.||||||||.||.|||||.|||||.
RBAM_024200__ 1250 GGGACAGAGTGGCACACGGCGGCCCCATCGTTGCTGTACTTGGAGCAGTA 1299
BSNT_02036___ 1300 GATCATGTCTTGATGTTTTTTATTGCTGTGATTGCAGGATCTCTTGTCAC 1349
||||||||..|||||||||||||.|||||.|..|||||.|||||||||||
RBAM_024200__ 1300 GATCATGTACTGATGTTTTTTATCGCTGTAACAGCAGGCTCTCTTGTCAC 1349
BSNT_02036___ 1350 TGCTCTGTTCGTCAATGTACTAAAAAAGGATATTACGGCG---TCTCCTG 1396
.||||||||.||.||||||||.||.||.||||| |||| ||.||.|
RBAM_024200__ 1350 CGCTCTGTTGGTTAATGTACTGAAGAAAGATAT---GGCGAAATCCCCCG 1396
BSNT_02036___ 1397 TGCTCAGTGA--AACTGCACCGACCTCCGCGCCAAGTGAAGCTGCTGCAG 1444
.||.|.|.|| ..||| |||.|...|||.||||.|||||||||.||.|
RBAM_024200__ 1397 CGCCCGGCGAGGTGCTG--CCGTCTGACGCACCAAATGAAGCTGCAGCGG 1444
BSNT_02036___ 1445 CAAATGAAATAAAACAGCCAATTC------AAAGCCAAAAAGCTGAGATG 1488
||||.||||.|||..|.|||..|| |.||||.||||||.|.||||
RBAM_024200__ 1445 CAAAAGAAACAAAGGAACCATCTCAGGCTGACAGCCGAAAAGCCGGGATG 1494
BSNT_02036___ 1489 TCGGAATTTAAAAAACTGACAGACATAATCAGCCCGGAATTAATTGAACC 1538
.|.|||.|.|||||||||||.|||||.|||||..||||.||.||||||||
RBAM_024200__ 1495 ACCGAAATCAAAAAACTGACTGACATTATCAGTACGGACTTGATTGAACC 1544
BSNT_02036___ 1539 AAATTTATCGGGGGAAACGAGGGATGACATCATAGATGAATTGATTCAGA 1588
..|||||||.||.|||||||||||||||||.||.||||||.||||...||
RBAM_024200__ 1545 GCATTTATCCGGCGAAACGAGGGATGACATTATCGATGAAATGATCGCGA 1594
BSNT_02036___ 1589 AATTGTCCCGAAGAGGTGCGCTGCTTTCAGAGAGCGGGTTTAAACAAGCC 1638
||.|||||||.|.||||..||||||.||.||.|||||.|||||.||.|||
RBAM_024200__ 1595 AAATGTCCCGTAAAGGTATGCTGCTGTCTGACAGCGGATTTAAGCAGGCC 1644
BSNT_02036___ 1639 ATTTTGAATCGTGAACAACAGGGAACAACGGCGATTGGCATGAATATCGC 1688
|||||||..||.|||||.||||||||.||||||||.||.|||||||||||
RBAM_024200__ 1645 ATTTTGAGCCGGGAACAGCAGGGAACCACGGCGATAGGTATGAATATCGC 1694
BSNT_02036___ 1689 GATTCCGCACGGAAAGTCTGAGGCGGTCAGGGAGCCGAGTGTTGCCTTTG 1738
.||||||||||||||||||||.||.||||....||||.||||.||.||.|
RBAM_024200__ 1695 CATTCCGCACGGAAAGTCTGAAGCCGTCAAAACGCCGGGTGTCGCATTCG 1744
BSNT_02036___ 1739 GGATCAAACGATCAGGCGTTGATTGGAATAGCCTGGATGGATCAGAAGCT 1788
|.||.|.|||.||.||.|||||.|||||.|||||.|||||.||.||.||.
RBAM_024200__ 1745 GAATAAGACGTTCGGGTGTTGACTGGAACAGCCTTGATGGTTCTGATGCA 1794
BSNT_02036___ 1789 AAATTAATCTTTATGATTGCTGTACCGAAAGAGAGCAGGGGAAACCAGCA 1838
|||.|.||.|||||||||||.||||||||.||.|||.|.|||||.|||||
RBAM_024200__ 1795 AAACTGATTTTTATGATTGCCGTACCGAAGGAAAGCGGCGGAAATCAGCA 1844
BSNT_02036___ 1839 TCTCAAAATACTGCAGATGCTATCTCGAAAGCTAATGGATGACAATTATA 1888
|||.||||||.||||||||.||||.|||||.||.||||||||||..|||.
RBAM_024200__ 1845 TCTGAAAATATTGCAGATGTTATCCCGAAAACTGATGGATGACAGCTATC 1894
BSNT_02036___ 1889 GGGAGCGGCTGCTCTCCGTGCAAACAACAGAAGAAGCATACAAGCTGCTA 1938
||||..|||||||||||||.||.||||.||||||.||.||..||||.||.
RBAM_024200__ 1895 GGGAAAGGCTGCTCTCCGTTCAGACAAAAGAAGAGGCGTATGAGCTTCTG 1944
BSNT_02036___ 1939 GAAGAAATCGAATAA 1953
|||||||||||||||
RBAM_024200__ 1945 GAAGAAATCGAATAA 1959
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