Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02037 and RBAM_024190
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:45
# Commandline: needle
# -asequence dna-align/BSNT_02037___manA.1.9828.seq
# -bsequence dna-align/RBAM_024190___manA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02037___manA-RBAM_024190___manA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02037___manA-RBAM_024190___manA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02037___manA
# 2: RBAM_024190___manA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 960
# Identity: 742/960 (77.3%)
# Similarity: 742/960 (77.3%)
# Gaps: 24/960 ( 2.5%)
# Score: 2855.5
#
#
#=======================================
BSNT_02037___ 1 ATGACGACTGAACCGTTATTTTTCAAGCCTGTTTTCAAAGAAAGAATTTG 50
|||.|.||||||||..||||||||||.||.||||||||||||||||||||
RBAM_024190__ 1 ATGTCTACTGAACCAATATTTTTCAATCCGGTTTTCAAAGAAAGAATTTG 50
BSNT_02037___ 51 GGGCGGGACCGCTTTAGC------TGATTTTGGCTATACCATTCCGTCAC 94
|||.|| |||| || |||||||..|||||..|||||||||.
RBAM_024190__ 51 GGGAGG---CGCT---GCCCTGCGTGATTTTCACTATAATATTCCGTCAG 94
BSNT_02037___ 95 AACGAACAGGGGAGTGCTGGGCTTTTGCCGCGCATCAAAATGGTCAAAGC 144
|.||.|||||||||||||||||.||.|||||.|||||||||||.||.|||
RBAM_024190__ 95 AGCGGACAGGGGAGTGCTGGGCCTTCGCCGCTCATCAAAATGGACAGAGC 144
BSNT_02037___ 145 GTTGTTCAAAACGGAATGTATAAGGGGTTCACGCTCAGCGAATTATGGGA 194
...||||.||||||.||||||||.||.|..||||||.|.|||||.|||||
RBAM_024190__ 145 ACAGTTCGAAACGGCATGTATAAAGGATGTACGCTCGGTGAATTGTGGGA 194
BSNT_02037___ 195 ACATCATAGACATTTATTCGGACAGCTTGAAGGGGACCGTTTTCCTCTGC 244
.|||||.|||.|||||||||||.|.||||||||.||.|||||||||||.|
RBAM_024190__ 195 GCATCACAGAGATTTATTCGGAAACCTTGAAGGAGATCGTTTTCCTCTTC 244
BSNT_02037___ 245 TTACAAAAATATTAGATGCTGACCAGGACTTATCTGTTCAGGTGCATCCG 294
||||||||||.||.|||||.|||||.|||.|.||.|||||||||||||||
RBAM_024190__ 245 TTACAAAAATTTTGGATGCGGACCAAGACCTGTCCGTTCAGGTGCATCCG 294
BSNT_02037___ 295 AATGATGAGTATGCCAACATACATGAAAACGGTGAGCTTGGAAAAACAGA 344
||||||||.|.||||||.||.|||||||||||.||.|||||||||||.||
RBAM_024190__ 295 AATGATGACTTTGCCAAAATGCATGAAAACGGGGAACTTGGAAAAACCGA 344
BSNT_02037___ 345 ATGCTGGTACATTATTGATTGCCAAAAAGATGCCGAGATTATTTATGGCC 394
|||||||||.||.||||||||...|||||||||.|||||.||||..||||
RBAM_024190__ 345 ATGCTGGTATATCATTGATTGTGCAAAAGATGCGGAGATCATTTTCGGCC 394
BSNT_02037___ 395 ACAATGCAACAACAAAGGAAGAACTAACTA-CCATGATAGAGCGTGGAGA 443
||||.|||||||||||.||||||||.| || |||||||.|||||.|||||
RBAM_024190__ 395 ACAACGCAACAACAAAAGAAGAACTGA-TATCCATGATTGAGCGCGGAGA 443
BSNT_02037___ 444 ATGGGATGAGCTCTTGCGCCGTGTAAAGGTAAAGCCGGGGGATTTTTTCT 493
||||||.|.||||.||..|.|..|.||||||||||||||.|||||.||||
RBAM_024190__ 444 ATGGGACGGGCTCCTGAACAGAATTAAGGTAAAGCCGGGAGATTTCTTCT 493
BSNT_02037___ 494 ATGTGCCAAGCGGTACTGTTCATGCGATTGGAAAAGGAATTCTTGCTTTG 543
.|||.||||||||.||.|||||.|||||||||||..|.|..|||..|||.
RBAM_024190__ 494 TTGTCCCAAGCGGCACCGTTCACGCGATTGGAAAGAGCACACTTATTTTA 543
BSNT_02037___ 544 GAGACGCAGCAGAATTCAGACACAACCTACAGATTATATGATTATGACCG 593
|||||||||||.||||||||.||.||.||||||||.||||||||.|...|
RBAM_024190__ 544 GAGACGCAGCAAAATTCAGATACGACTTACAGATTGTATGATTACGGAAG 593
BSNT_02037___ 594 AAAAGATGCAGAAGGCAAGCTGCGCGAGCTTCATCTGAAAAAGAGCATCG 643
|||||||||.||.||||.|.||||||||||.|||.||.||||.||.||.|
RBAM_024190__ 594 AAAAGATGCGGACGGCAGGATGCGCGAGCTCCATTTGGAAAAAAGTATAG 643
BSNT_02037___ 644 AAGTGATAGAGGTCCCGTCTATTCCAGAACGGCATACAGTTCACCATGAA 693
||||||||||.||.||.|||.|.|..|||||||..||.||||||.||.||
RBAM_024190__ 644 AAGTGATAGACGTTCCATCTGTCCGTGAACGGCCGACCGTTCACTATAAA 693
BSNT_02037___ 694 CAAATTGAGGATTTGCTTACAACGACATTGGTT-----GAATGCGCTTAC 738
||||..||.|||.||||..||.| ||.|| |||||..||||.
RBAM_024190__ 694 CAAACAGATGATCTGCTGGCAGC-----TGTTTTAATAGAATGTCCTTAT 738
BSNT_02037___ 739 TTTTCGGTGGGGAAATGGAACTTATCAGGATCAGCAAGCTTAAAGCAGCA 788
|||||.||.|..||.|||....||..|||...|||||...||...|||||
RBAM_024190__ 739 TTTTCAGTCGAAAAGTGGGTTGTAAAAGGTGAAGCAAATCTATTCCAGCA 788
BSNT_02037___ 789 AAAACCATTCCTTCTTATCAGTGTGATTGAAGGGGAGGGCCGTATGATCT 838
..|.||.|||||||||.||||.|||||.|||||.||.||....|||||..
RBAM_024190__ 789 TCATCCCTTCCTTCTTGTCAGCGTGATCGAAGGAGACGGAATAATGATTG 838
BSNT_02037___ 839 CTGGTGAGTATGTCTATCCTTTCAAAAAAGGAGATCATATGTTGCTGCCT 888
|.||.|.|.|||..|||||.||.|.|||||||||||||||..|.||||||
RBAM_024190__ 839 CAGGCGGGCATGAATATCCCTTTAGAAAAGGAGATCATATTCTCCTGCCT 888
BSNT_02037___ 889 TACGGTCTTGGAGAATTTAAACTCGAAGGATATGCAGAATGTATCGTCTC 938
|.||||.|.|||||||.||||||.|.|||..|||||.|.|||||.||.||
RBAM_024190__ 889 TCCGGTTTGGGAGAATATAAACTGGCAGGCCATGCAAATTGTATTGTGTC 938
BSNT_02037___ 939 CCATCTGTAA 948
.|||||||.|
RBAM_024190__ 939 TCATCTGTGA 948
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