Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03833 and RBAM_024040
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:10
# Commandline: needle
# -asequence dna-align/BSNT_03833.1.9828.seq
# -bsequence dna-align/RBAM_024040___spoIIIC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03833-RBAM_024040___spoIIIC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03833-RBAM_024040___spoIIIC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03833
# 2: RBAM_024040___spoIIIC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 729
# Identity: 605/729 (83.0%)
# Similarity: 605/729 (83.0%)
# Gaps: 6/729 ( 0.8%)
# Score: 2542.0
#
#
#=======================================
BSNT_03833 1 ATGGTGACAGGTGTTTTCGCAGCGCTCGGCTTTGTTGTTAAAGAGCTTGT 50
||||||||||||||.|||||||||||.|||.||||.|||||.|||||
RBAM_024040__ 1 ---GTGACAGGTGTTTTTGCAGCGCTCGGGTTTATTGTGAAAGAACTTGT 47
BSNT_03833 51 CTTTTTAGTATCTTACGTGAAAAACAATGCCTTTCCACAACCGCTCTCAA 100
.|||||||||||.|||||||||||.|||||||||||||||||||||||||
RBAM_024040__ 48 GTTTTTAGTATCATACGTGAAAAATAATGCCTTTCCACAACCGCTCTCAA 97
BSNT_03833 101 GCAGCGAAGAAAAAAAATACTTAGAGCTCATGGCTAAAGGGGATGAACAT 150
..|..||.||.||||||||||||||.||.||||||.||||.||||||||.
RBAM_024040__ 98 ATAATGAGGAGAAAAAATACTTAGACCTTATGGCTGAAGGAGATGAACAC 147
BSNT_03833 151 GCCAGAAACATGCTGATTGAGCATAATCTTCGCTTGGTCGCCCATATTGT 200
|||.|.|||||||||||.||.||||||||.||.||.||||||||||||||
RBAM_024040__ 148 GCCCGCAACATGCTGATCGAACATAATCTCCGTTTAGTCGCCCATATTGT 197
BSNT_03833 201 GAAAAAGTTCGAAAATACAGGTGAGGATGCAGAGGACTTAATCTCCATCG 250
||||||.||||||||.||.||.|||||.||.||.||..|.||||||||||
RBAM_024040__ 198 GAAAAAATTCGAAAACACGGGAGAGGACGCGGAAGATCTGATCTCCATCG 247
BSNT_03833 251 GAACGATCGGGTTGATAAAAGGAATTGAAAGCTATTCCGCTGGTAAAGGG 300
|.||.||||||.||||.|||||||||||||||||.||.||.||.|||||.
RBAM_024040__ 248 GTACAATCGGGCTGATTAAAGGAATTGAAAGCTACTCAGCCGGAAAAGGC 297
BSNT_03833 301 ACAAAGCTGGCGACGTATGCTGCGAGGTGTATTGAAAATGAAATCCTCAT 350
||.|||||.||.||.|||||.||..|.||||||||||||||.||..|.||
RBAM_024040__ 298 ACGAAGCTTGCCACATATGCCGCACGATGTATTGAAAATGAGATTTTAAT 347
BSNT_03833 351 GCATTTGCGCGCATTGAAAAAAACAAAAAAAGACGTCTCCCTTCACGATC 400
||||.|||||||||||||||||||.||||||||||||||||||||.||||
RBAM_024040__ 348 GCATCTGCGCGCATTGAAAAAAACGAAAAAAGACGTCTCCCTTCATGATC 397
BSNT_03833 401 CGATCGGGCAGGATAAGGAAGGGAATGAAATAAGCCTGATTGACGTTTTG 450
|||||||.||||||||.|||||||||||||||||||||||.||.||..|.
RBAM_024040__ 398 CGATCGGCCAGGATAAAGAAGGGAATGAAATAAGCCTGATCGATGTCCTT 447
BSNT_03833 451 AAATCAGAAAACGAAGACGTGATAGATACGATCCAGCTCAATATGGAGCT 500
||.||.||||.||||||.|||||.||.||.||.||||||||.|||||.||
RBAM_024040__ 448 AAGTCGGAAAGCGAAGATGTGATCGACACCATTCAGCTCAACATGGAACT 497
BSNT_03833 501 TGAAAAAGTGAAACAATACATTGACATTTTAGATGACCGTGAGAAGGAAG 550
||||||.||.|||.||||.||.||.||||||||.|||||.||.||.||||
RBAM_024040__ 498 TGAAAAGGTCAAAAAATATATCGATATTTTAGACGACCGCGAAAAAGAAG 547
BSNT_03833 551 TGATTGTCGGTCGGTTTGGACTTGATTTGAAGAAGGAAAAAACGCAGCGA 600
|.||.|||||.||.||.||.||||||||.||.||.||||||||||||||.
RBAM_024040__ 548 TCATCGTCGGCCGCTTCGGGCTTGATTTAAAAAAAGAAAAAACGCAGCGC 597
BSNT_03833 601 GAGATTGCCAAAGAACTCGGTATCTCGCGCAGCTATGTATCGCGGATTGA 650
|||||.||.||.||.|||||.||.||..|.||.||.||.|||||||||||
RBAM_024040__ 598 GAGATCGCAAAGGAGCTCGGCATTTCAAGGAGTTACGTGTCGCGGATTGA 647
BSNT_03833 651 AAAGCGGGCGTTGATGAAGATGTTTCATGAGTTTTATCGGGCAGAGAAGG 700
|||.||.||.||||||||||||||.|||||||||||||||||.|||||||
RBAM_024040__ 648 AAAACGCGCATTGATGAAGATGTTCCATGAGTTTTATCGGGCGGAGAAGG 697
BSNT_03833 701 AAAAGCGGAAGAAGGCGAAGGGGAAATAA 729
|.||||||||||| ||||||.||.|.|
RBAM_024040__ 698 AGAAGCGGAAGAA---GAAGGGAAAGTGA 723
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