Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03821 and RBAM_023990

See Amino acid alignment / Visit BSNT_03821 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:09
# Commandline: needle
#    -asequence dna-align/BSNT_03821.1.9828.seq
#    -bsequence dna-align/RBAM_023990___sda.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03821-RBAM_023990___sda.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03821-RBAM_023990___sda.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03821
# 2: RBAM_023990___sda
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 141
# Identity:     131/141 (92.9%)
# Similarity:   131/141 (92.9%)
# Gaps:           0/141 ( 0.0%)
# Score: 615.0
# 
#
#=======================================

BSNT_03821         1 ATGAGAAAACTGTCTGATGAATTACTAATAGAATCTTATTTCAAAGCCAC     50
                     ||||||||.||.|||||||||||||||||||||||||||||||||||||.
RBAM_023990__      1 ATGAGAAAGCTTTCTGATGAATTACTAATAGAATCTTATTTCAAAGCCAA     50

BSNT_03821        51 CGAAATGAATTTAAACCGTGACTTTATCGAGTTAATTGAAAACGAAATAA    100
                     .|||||||||||.|.||||||.||||||||||||||||||||||||||.|
RBAM_023990__     51 TGAAATGAATTTGAGCCGTGAATTTATCGAGTTAATTGAAAACGAAATCA    100

BSNT_03821       101 AAAGAAGATCGCTCGGACATATTATTTCCGTATCTTCTTAA    141
                     |||||||||||||||||||.|||||||||||.|||||||||
RBAM_023990__    101 AAAGAAGATCGCTCGGACACATTATTTCCGTTTCTTCTTAA    141


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