Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03817 and RBAM_023950
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:09
# Commandline: needle
# -asequence dna-align/BSNT_03817___yqeI.1.9828.seq
# -bsequence dna-align/RBAM_023950___yqeI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03817___yqeI-RBAM_023950___yqeI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03817___yqeI-RBAM_023950___yqeI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03817___yqeI
# 2: RBAM_023950___yqeI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 291
# Identity: 258/291 (88.7%)
# Similarity: 258/291 (88.7%)
# Gaps: 0/291 ( 0.0%)
# Score: 1158.0
#
#
#=======================================
BSNT_03817___ 1 ATGTTAACAGGTAAACAAAAACGTTTTTTGCGTTCTAAAGCGCATCATTT 50
|||||||||||.|||||||||||.|||||||||||.||||||||||||||
RBAM_023950__ 1 ATGTTAACAGGAAAACAAAAACGGTTTTTGCGTTCAAAAGCGCATCATTT 50
BSNT_03817___ 51 AACGCCGATTTTTCAAGTAGGTAAAGGCGGAGTAAACGACAACATGATTA 100
||||||.|||||||||||.||.|||||||||||.|||||.||||||.|.|
RBAM_023950__ 51 AACGCCTATTTTTCAAGTGGGAAAAGGCGGAGTCAACGAAAACATGGTGA 100
BSNT_03817___ 101 AACAAATTGCTGAGGCGCTTGAAGCGAGAGAGCTGATTAAAGTCAGCGTG 150
||||.|||||.|||||..|.|||||.||||||||||||||||||||||||
RBAM_023950__ 101 AACAGATTGCCGAGGCTTTAGAAGCAAGAGAGCTGATTAAAGTCAGCGTG 150
BSNT_03817___ 151 CTTCAGAATTGCGAAGAGGATAAAAACGATGTAGCGGAAGCTCTTGTAAA 200
|||||.||.||||||||.||||||||.|||||.||.|||||.|||||.||
RBAM_023950__ 151 CTTCAAAACTGCGAAGACGATAAAAATGATGTCGCAGAAGCCCTTGTGAA 200
BSNT_03817___ 201 AGGAAGCCGCTCTCAATTGGTGCAGACAATCGGCAATACGATTGTGTTAT 250
|||.|.||||||.||||||||||||||.|||||.||||||||.||.||.|
RBAM_023950__ 201 AGGCACCCGCTCACAATTGGTGCAGACGATCGGAAATACGATCGTATTGT 250
BSNT_03817___ 251 ATAAGGAATCAAAGGAAAATAAACAAATCGAGCTTCCTTAA 291
|||||||||||||||||||||||||||||||||||||.|||
RBAM_023950__ 251 ATAAGGAATCAAAGGAAAATAAACAAATCGAGCTTCCGTAA 291
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