Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03814 and RBAM_023920
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:09
# Commandline: needle
# -asequence dna-align/BSNT_03814___yqeL.1.9828.seq
# -bsequence dna-align/RBAM_023920___yqeL.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03814___yqeL-RBAM_023920___yqeL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03814___yqeL-RBAM_023920___yqeL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03814___yqeL
# 2: RBAM_023920___yqeL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 358
# Identity: 291/358 (81.3%)
# Similarity: 291/358 (81.3%)
# Gaps: 2/358 ( 0.6%)
# Score: 1175.0
#
#
#=======================================
BSNT_03814___ 1 ATGAACCAAAAGTCCATTTTAAAGATCGCAGCTGCGGCTTGCGACGATAA 50
|||||.|||...|||.|.|||||.|||||.||....||.|||||||||||
RBAM_023920__ 1 ATGAATCAAGCTTCCGTATTAAAAATCGCGGCAAAAGCATGCGACGATAA 50
BSNT_03814___ 51 ACGGGCAGAGGATATTTTAGCACTGGATATGGAAGGTATTTCTCTGGTTG 100
|||.|||||.|||||||||||.|||||.||||||||.||.||.||..|.|
RBAM_023920__ 51 ACGTGCAGAAGATATTTTAGCGCTGGACATGGAAGGAATCTCACTTATAG 100
BSNT_03814___ 101 CTGATTATTTTCTGATCTGTCACGGAAATTCAGATAAACAGGTACAGGCG 150
|.|||||.|||.|.|||||.|||||.|||||.|||||.|||||.|||||.
RBAM_023920__ 101 CGGATTACTTTTTAATCTGCCACGGGAATTCTGATAAGCAGGTTCAGGCA 150
BSNT_03814___ 151 ATTGCCCGTGAAATCAAGGATCAGGCTGATGAAAACGGCATTCAAGTCAA 200
|||||.||||||||.||.||||||||.||.||||||||||||.|.|||||
RBAM_023920__ 151 ATTGCGCGTGAAATTAAAGATCAGGCAGAAGAAAACGGCATTGATGTCAA 200
BSNT_03814___ 201 AAAGATGGAAGGCTTTGATGAAGCAAGATGGGTTCTCGTTGATCTAGGCG 250
||||||||||||.||||||||.||..|.|||.||.|.||||||||.||||
RBAM_023920__ 201 AAAGATGGAAGGGTTTGATGAGGCCCGCTGGATTTTAGTTGATCTCGGCG 250
BSNT_03814___ 251 ATGTGATTGTCCATGTCTTCCACAAGGACGAAAGAAGCTACTACAACCTT 300
|.||.||||||||.||.|||||.||.||.|||||||||||||||||.|||
RBAM_023920__ 251 ACGTCATTGTCCACGTTTTCCATAAAGATGAAAGAAGCTACTACAATCTT 300
BSNT_03814___ 301 GAAAAGCTGTGGGGAGACGCTCCGCTCGCAGATCTTGACCTTGGAATGAA 350
||||||||.|||||.|||||.|||||||||||.|||||.||.||..||||
RBAM_023920__ 301 GAAAAGCTATGGGGCGACGCGCCGCTCGCAGAGCTTGAACTCGGCTTGAA 350
BSNT_03814___ 351 -TCAATGA 357
|| ||||
RBAM_023920__ 351 CTC-ATGA 357
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