Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03798 and RBAM_023810
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:07
# Commandline: needle
# -asequence dna-align/BSNT_03798___lepA.1.9828.seq
# -bsequence dna-align/RBAM_023810___lepA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03798___lepA-RBAM_023810___lepA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03798___lepA-RBAM_023810___lepA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03798___lepA
# 2: RBAM_023810___lepA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1839
# Identity: 1550/1839 (84.3%)
# Similarity: 1550/1839 (84.3%)
# Gaps: 3/1839 ( 0.2%)
# Score: 6606.0
#
#
#=======================================
BSNT_03798___ 1 GTGACAGATAAAGAAAAGCGTTTAGAGAGGCAATCGAGAATACGGAATTT 50
||||||||||||||||||||||||||||||||.||.|||||.||||||||
RBAM_023810__ 1 GTGACAGATAAAGAAAAGCGTTTAGAGAGGCAGTCAAGAATCCGGAATTT 50
BSNT_03798___ 51 CTCTATCATTGCCCATATTGACCACGGAAAATCGACCTTAGCGGATCGTA 100
|||.|||||.|||||.||.||||||||.|||||||||||.||||||||.|
RBAM_023810__ 51 CTCCATCATCGCCCACATAGACCACGGCAAATCGACCTTGGCGGATCGGA 100
BSNT_03798___ 101 TTTTAGAAAAAACGTCGGCAATCACTCAACGAGAAATGAAAGAACAATTG 150
|||||||||||||.|||||.|||||.||.||.||||||||||||||||||
RBAM_023810__ 101 TTTTAGAAAAAACATCGGCGATCACCCAGCGGGAAATGAAAGAACAATTG 150
BSNT_03798___ 151 CTCGATTCTATGGATCTTGAACGTGAGCGGGGCATAACCATTAAATTAAA 200
||.|||||.|||||.||||||||.||.|||||.||.|||||.||||||||
RBAM_023810__ 151 CTTGATTCAATGGACCTTGAACGCGAACGGGGAATTACCATCAAATTAAA 200
BSNT_03798___ 201 CTCTGTTCAGCTTAAATATAAAGCAAAAGACGGAGAAGAATATATCTTTC 250
.||.||||||||.|||||.|||||.||||||||||||||||||||.||||
RBAM_023810__ 201 TTCCGTTCAGCTGAAATACAAAGCTAAAGACGGAGAAGAATATATATTTC 250
BSNT_03798___ 251 ATCTAATCGATACGCCGGGACACGTCGACTTCACGTATGAAGTATCCCGA 300
||||.|||||.|||||.||||||||||||||.||.||||||||.||.|||
RBAM_023810__ 251 ATCTCATCGACACGCCCGGACACGTCGACTTTACATATGAAGTTTCGCGA 300
BSNT_03798___ 301 AGCCTTGCTGCCTGCGAGGGAGCGATTCTTGTCGTGGATGCAGCCCAGGG 350
|||||.||||||||.||.||.||||||||.||.||.|||||.||.|||||
RBAM_023810__ 301 AGCCTGGCTGCCTGTGAAGGCGCGATTCTCGTTGTTGATGCGGCTCAGGG 350
BSNT_03798___ 351 GATTGAAGCGCAGACGCTCGCCAATGTCTACTTAGCGCTTGACAACGATC 400
.||.|||||||||||..|.||.||.|||||..|.||||||||.||.||||
RBAM_023810__ 351 AATAGAAGCGCAGACATTGGCGAACGTCTATCTGGCGCTTGATAATGATC 400
BSNT_03798___ 401 TTGAAATCCTTCCGGTCATCAATAAAATCGACCTTCCGAGCGCCGAGCCC 450
||||.||.|||||.|||||.|||||||||||.||.||||||||.|||||.
RBAM_023810__ 401 TTGAGATTCTTCCTGTCATTAATAAAATCGATCTCCCGAGCGCAGAGCCA 450
BSNT_03798___ 451 GAACGTGTGCGCCAAGAGGTAGAAGACGTTATCGGCCTTGACGCATCAGA 500
|||||||||||.||||||||.||.||||||||||||||||||||.|||||
RBAM_023810__ 451 GAACGTGTGCGTCAAGAGGTTGAGGACGTTATCGGCCTTGACGCTTCAGA 500
BSNT_03798___ 501 AGCCGTGCTTGCTTCAGCAAAAGCCGGTATCGGGATTGAGGAGATTTTAG 550
.|||||.||.||||||||.|||||.||.|||||.||.||.||.|||||||
RBAM_023810__ 501 CGCCGTCCTCGCTTCAGCGAAAGCGGGCATCGGCATCGAAGACATTTTAG 550
BSNT_03798___ 551 AACAAATCGTAGAAAAGGTGCCAGCTCCGACCGGAGATCCGGAGGCGCCG 600
||||.|||||||||||.|||||.|||||..|.|||||||||||.||.|||
RBAM_023810__ 551 AACAGATCGTAGAAAAAGTGCCGGCTCCCGCGGGAGATCCGGAAGCTCCG 600
BSNT_03798___ 601 CTCAAAGCGCTGATCTTCGACTCGCTTTATGACGCCTACCGCGGTGTCGT 650
||.||||||||.|||||.|||||||||||||||||.||||||||.|||||
RBAM_023810__ 601 CTGAAAGCGCTCATCTTTGACTCGCTTTATGACGCGTACCGCGGAGTCGT 650
BSNT_03798___ 651 GGCTTATATCAGAGTCGTTGAAGGAACGGTAAAGCCGGGACAAAAAATCA 700
.||.||||||||||||||.||||||||.||.||.|||||.||.|||||.|
RBAM_023810__ 651 CGCGTATATCAGAGTCGTAGAAGGAACAGTCAAACCGGGCCAGAAAATTA 700
BSNT_03798___ 701 AAATGATGGCAACCGGCAAAGAATTCGAAGTAACAGAGGTGGGCGTGTTC 750
||||||||||||||||.|||||.||.|||||.|..||.||.|||||.|||
RBAM_023810__ 701 AAATGATGGCAACCGGAAAAGAGTTTGAAGTCATCGAAGTCGGCGTCTTC 750
BSNT_03798___ 751 ACGCCGAAAGCAACTCCGACAAATGAACTGACGGTCGGTGATGTAGGCTT 800
|||||||||||....|||.|..|.|||.||||.||||||||.|||||||.
RBAM_023810__ 751 ACGCCGAAAGCGCAGCCGGCTGACGAATTGACAGTCGGTGACGTAGGCTA 800
BSNT_03798___ 801 CCTGACTGCCTCAATCAAAAATGTCGGTGACACACGTGTCGGTGATACAA 850
..||||.|||.||||||||||.|||||.|||||.||||||||||||||.|
RBAM_023810__ 801 TTTGACAGCCGCAATCAAAAACGTCGGCGACACCCGTGTCGGTGATACGA 850
BSNT_03798___ 851 TAACGAGCGCTGCCAATCCTGCAGAAGAAGCGCTGCCGGGATACCGCAAG 900
|.||||||||.|..||.|||||.|.|||||||||.|||||.||||||||.
RBAM_023810__ 851 TCACGAGCGCGGTTAAGCCTGCGGCAGAAGCGCTTCCGGGCTACCGCAAA 900
BSNT_03798___ 901 CTAAACCCGATGGTGTACTGTGGTTTGTATCCGATTGATACAGCGAAGTA 950
||.||.||||||||.|||||.||..|.|||||||||||.|||||.||.||
RBAM_023810__ 901 CTCAATCCGATGGTATACTGCGGACTTTATCCGATTGACACAGCCAAATA 950
BSNT_03798___ 951 TAATGATTTAAGGGAAGCTCTTGAAAAGCTTGAGCTGAATGATTCCTCCC 1000
|||||||||..|.||.|||||.|||||.|||||..||||.|||||.||.|
RBAM_023810__ 951 TAATGATTTGCGCGAGGCTCTGGAAAAACTTGAATTGAACGATTCATCTC 1000
BSNT_03798___ 1001 TTCAATATGAAGCGGAAACTTCGCAAGCGCTTGGATTCGGGTTCCGCTGC 1050
|||||||.||.|||||.||.||.|||||.||.||.|||||.|||||||||
RBAM_023810__ 1001 TTCAATACGAGGCGGAGACGTCACAAGCCCTCGGCTTCGGCTTCCGCTGC 1050
BSNT_03798___ 1051 GGATTTTTAGGCATGCTTCACATGGAGATCATTCAGGAGCGAATTGAGCG 1100
||.||||||||.||||||||||||||.||||||||.|||||.|||||.||
RBAM_023810__ 1051 GGTTTTTTAGGAATGCTTCACATGGAAATCATTCAAGAGCGGATTGAACG 1100
BSNT_03798___ 1101 TGAGTTCAACATCGACCTGATTACGACAGCGCCAAGCGTTATCTATGATG 1150
.||.||.||.||.|||||.||.|||||.|||||.||||||||.|||||.|
RBAM_023810__ 1101 GGAATTTAAAATTGACCTTATCACGACCGCGCCGAGCGTTATTTATGACG 1150
BSNT_03798___ 1151 TGTATATGACAGACGGCGAAAAGGTCGTTGTCGACAACCCGTCCAACATG 1200
|.||||||||.||||||||||||.||.|.||.||.||||||||.||||||
RBAM_023810__ 1151 TTTATATGACGGACGGCGAAAAGATCATCGTGGATAACCCGTCAAACATG 1200
BSNT_03798___ 1201 CCGGATCCTCAAAAGATCGAAAGGGTTGAGGAGCCATACGTAAAAGCGAC 1250
||.||.||.|||||.||.||..||||.||.||.||.||.||.||||||||
RBAM_023810__ 1201 CCTGACCCGCAAAAAATAGAGCGGGTGGAAGAACCTTATGTCAAAGCGAC 1250
BSNT_03798___ 1251 GATGATGGTGCCGAATGACTATGTCGGCGCTGTAATGGAGCTTTGCCAAG 1300
|||||||||.|||||.||.||.|||||.||.||.|||||||||||.||.|
RBAM_023810__ 1251 GATGATGGTTCCGAACGATTACGTCGGAGCGGTTATGGAGCTTTGTCAGG 1300
BSNT_03798___ 1301 GAAAACGCGGCAATTTCATTGATATGCAGTATTTAGACGCAAACCGTGTC 1350
|.|||||.|||||.||.||.|||||||||||.||||||||.|||||.|||
RBAM_023810__ 1301 GGAAACGGGGCAACTTTATCGATATGCAGTACTTAGACGCCAACCGGGTC 1350
BSNT_03798___ 1351 AGCATCATTTATGATATGCCATTAGCGGAAATCGTATATGAGTTTTTTGA 1400
|||||..|.|||||.|||||..|.|||||||||||||||||.||||||||
RBAM_023810__ 1351 AGCATTGTATATGAGATGCCTCTTGCGGAAATCGTATATGAATTTTTTGA 1400
BSNT_03798___ 1401 TCAGCTGAAATCAAGCACTAAAGGCTATGCGTCCTTTGATTATGAACTGA 1450
||||||||||||.|||||.|||||.||.||.||.||.|||||.|||||||
RBAM_023810__ 1401 TCAGCTGAAATCCAGCACGAAAGGGTACGCCTCTTTCGATTACGAACTGA 1450
BSNT_03798___ 1451 TCGGCTACAAACCGTCCAAGCTTGTGAAAATGGACATTATGCTGAATGGT 1500
||||||||||||||||.||.|||||.||.|||||||||||||||||.||.
RBAM_023810__ 1451 TCGGCTACAAACCGTCTAAACTTGTCAAGATGGACATTATGCTGAACGGA 1500
BSNT_03798___ 1501 GAAAAAATCGATGCCCTTTCCTTTATCGTGCATCGTGATTACGCATATGA 1550
|||||||||||.||||||||.||||||||||||||.||||||||.||.||
RBAM_023810__ 1501 GAAAAAATCGACGCCCTTTCATTTATCGTGCATCGCGATTACGCGTACGA 1550
BSNT_03798___ 1551 ACGGGGAAAAGTGATCGTTGAAAAACTGAAAGAACTCATTCCGCGCCAGC 1600
|||.||||||||.||.||.||||||||||||||.||.|||||||||||||
RBAM_023810__ 1551 ACGCGGAAAAGTAATTGTGGAAAAACTGAAAGAGCTTATTCCGCGCCAGC 1600
BSNT_03798___ 1601 AGTTTGAAGTTCCGGTACAAGCCGCAATCGGCCAGAAAATCGTGGCCCGC 1650
|.||||||||.|||.|.|||||.||.|||||.||||||||||||||||||
RBAM_023810__ 1601 ACTTTGAAGTACCGATTCAAGCGGCGATCGGACAGAAAATCGTGGCCCGC 1650
BSNT_03798___ 1651 TCCACCATAAAAGCAATGCGTAAAAACGTATTGGCTAAATGTTACGGAGG 1700
||.|||||.||.||.|||||.||||||||..|.||.||||||||||||||
RBAM_023810__ 1651 TCAACCATTAAGGCCATGCGGAAAAACGTCCTTGCAAAATGTTACGGAGG 1700
BSNT_03798___ 1701 GGACATCTCGCGTAAACGGAAACTTCTTGAAAAACAAAAAGAAGGAAAAC 1750
.|||||||||||.||||||||.||||||||||||||||||||||||||||
RBAM_023810__ 1701 AGACATCTCGCGGAAACGGAAGCTTCTTGAAAAACAAAAAGAAGGAAAAC 1750
BSNT_03798___ 1751 GCCGTATGAAGCAGGTCGGCTCAGTTGAAGTGCCGCAAGAAGCATTTATG 1800
||||.||||||||||||||||||||.|||||||||||.|||||.||||||
RBAM_023810__ 1751 GCCGGATGAAGCAGGTCGGCTCAGTAGAAGTGCCGCAGGAAGCGTTTATG 1800
BSNT_03798___ 1801 GCAGTTCTGAAAATGGACGACAGTCCGAAAAAACAATAG 1839
||.|||||.||||||||.|||||.|||||||||.||
RBAM_023810__ 1801 GCCGTTCTTAAAATGGATGACAGCCCGAAAAAATAA--- 1836
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